Hippoglossus stenolepis (Pacific halibut): 118100967
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Entry
118100967 CDS
T08308
Symbol
cnga1a
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
118100967 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118100967 (cnga1a)
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
118100967 (cnga1a)
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GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Nop14
Piezo_TM1-24
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
118100967
NCBI-ProteinID:
XP_035002425
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Position
2:complement(18976764..18982264)
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AA seq
707 aa
AA seq
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MTTPATHHHLPVPPHPVKQITSNSKEDEIPALQPNPHCLLNVNNSNNSEEKKENEEKDKE
EEEEEEQEEDKEEEKEKEKDEEKEKEEEEEKEKEKEKEEEKEKEKEKEKEKEKEKDKDKD
KDKDKPKELFVINPAGNLYYHWLFIITLPVMYNWTTIIARACFEELQDNYFIYWIVLDYT
SDLVYLADMFFRIRTGYLEQGLMVKDEKLLRDRYMSSFQFRLDVVSVLPTDVFYLFLGFS
YPEIRLNKLLRIGRMLEFFTRTETKTNYPNIFRIGNLIMYILIIIHWNACFYFSFSKSIG
FGADDWVYPALDDPERPAFGLPMRKYAFCLYWSTLTLTTIGEMPPPALDSEFFFHVADFL
VGVLIFATIVGNIATMISNMNAAQAQFQSRIDNIKQYMRVRKVSKELELRVIKWFDYLWN
NGKAQDENEVLRYLPDKLKAEIAIQVHMATLKKVRIFADCEAGLLIELVLKLRPQVFSPG
DYICKKGDIGREMYIIKDGKLAVVADDGVTQFVVLGSGSYFGEISILNIKGSKAGNRRTA
NIRSIGYSDLFCLSKDDLMESLTEYPDAKGMLEDKGRQILMKDGLIELDPANILPEVQEL
EEKVNRLYNTMDLMQTKLKKILGNYMSADKALRYRITDLERLTGEEVEDEDDEEEEVRKD
EKAVEGETKEEEKAEEGEKKEDEQKGEEEKTGEAKDEDGKGDEAKEE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccccagcaacccatcaccacctccctgtgccgcctcaccctgtgaagcaaatc
acctctaacagcaaagaggacgagatacctgcgcttcaaccaaaccctcactgtctgctc
aatgtgaacaacagtaacaacagtgaggaaaagaaggagaatgaggaaaaggataaagaa
gaagaagaagaagaagagcaggaggaagacaaagaggaggaaaaggaaaaggaaaaagat
gaagaaaaggaaaaagaagaagaagaagaaaaagaaaaggaaaaagaaaaagaagaggaa
aaagaaaaagaaaaagaaaaggaaaaggaaaaggaaaaggaaaaggacaaagacaaggac
aaggacaaagacaaacccaaagaactgtttgtcattaatcctgctgggaatctctattac
cattggctgttcatcatcacactgccagtcatgtacaactggaccacgatcatagccagg
gcttgctttgaggagctgcaggacaactacttcatttactggattgttttggactacacc
tccgacctggtctacctggctgatatgttcttcaggatcagaacaggttacctggaacaa
ggtctgatggtgaaagatgagaagctgctgcgggatcgctacatgagcagcttccagttt
cgcctcgatgttgtctccgtgctgcccacagacgtcttctatctcttcctgggcttcagc
tacccggagatccgcctcaacaagctgctgagaatcgggcgcatgttggagttcttcacg
aggacagagaccaaaaccaattaccccaacatcttccgcatcggaaacttgatcatgtac
atcctcattatcatccactggaacgcctgcttctacttctccttctccaagtctattggt
ttcggggccgacgactgggtttacccggctctggatgatccagagcggcctgcgtttgga
ctgcccatgaggaagtatgcgttctgcctctactggtccacactgaccctgaccaccatc
ggagaaatgccaccaccagctctggactcagagtttttcttccatgtggccgacttctta
gttggagtcttgatttttgccacaattgtaggaaacatcgccaccatgatctccaacatg
aacgctgcccaagcccagtttcagtcccgaatcgacaacatcaagcaatatatgcgggtt
cgaaaagtcagcaaggagcttgagctgcgagtcatcaagtggtttgactacctgtggaac
aatggtaaggcgcaggatgaaaatgaggtgctgcggtaccttccagacaaactaaaggct
gaaattgccatccaggtccacatggcgaccctaaaaaaagttcgtatttttgccgactgc
gaggctggcctgctgatcgagctggtgctcaagctgcggcctcaagtcttcagccccgga
gactatatctgcaagaagggcgacatcgggcgcgagatgtatatcatcaaagacgggaaa
ctggcagtcgttgcagacgatggcgtcacgcagtttgttgtcttgggaagtggcagctat
ttcggtgagatcagcatcctcaatatcaaaggcagcaaagcagggaacaggcggacagcc
aacatccgcagcatcggatactcagacctcttctgcctgtccaaggacgacctgatggag
tctctgaccgagtatccggacgctaaaggcatgctggaagacaaaggccggcagatcctg
atgaaagacggtctgatcgagctggaccccgctaacattttgcctgaggtgcaagagctg
gaggagaaggtcaacagattgtataacactatggatttgatgcagaccaagctgaaaaag
attctgggaaattacatgagcgccgacaaagctctgagataccgcatcacagacctggag
cgcctgacgggagaggaggtggaggatgaggatgacgaggaagaggaggtaagaaaagac
gagaaggcggtggaaggggagacgaaggaagaggaaaaagcagaagagggggagaaaaag
gaagacgaacaaaaaggtgaagaggaaaaaacaggggaagctaaagatgaagatggaaag
ggtgacgaggcaaaagaagagtga
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