Hippoglossus stenolepis (Pacific halibut): 118101023
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Entry
118101023 CDS
T08308
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118101023 (mms19)
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118101023 (mms19)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118101023 (mms19)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
118101023 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
API5
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
118101023
NCBI-ProteinID:
XP_035002527
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All DBs
Position
21:6684531..6697785
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AA seq
1031 aa
AA seq
DB search
MAADSSLLLSLVEEFVSGLQDSKAKDTATGVKDGQFTVLQLVEALGLSLTSSQPHTRARG
VQLLSEVLHECYGNLTEREVEVLIAFYENRLKDHYVITPSVLQGLRALTKCAALPPGSAV
SMLRSLFQDVHVQSLMLAERSCVYSMLINLMETREAELKGLGADFVFGFVQSMDGERDPR
NLLLAFQIAKSIIHRGYDLGKFTEELFEVTSCYFPIDFTPPSNDPHGITKDDLIEALRAV
LSGTPKFAEFVLPLIIEKLDSDVQSAKLDSLQTLTSCMSQYEHKDLAEFLEGLWTSLRRE
VFQTSSERIECAGLAALTALTSCLSRSVLNSDSEDSLSTFLVLVLTDCKHHLCEPDLKLV
WPSAKLLQAACSASSRASHIITAAVMPALVEQYSSRTQCSHRRTLLEVVLRFIESVTSSQ
SSENEESMFLAFRQSLCDMVFSALLETNSSLQITATSMLTSLAQQTGLLLDADIELAVDH
LTRLLLTEEDEKVSVAVVDCAGALAELHPTIFITKFIPRLKKEMFSEPMDQDNNREASEQ
HSHHAVRKQCLSALAAVSIRPSVVQESTPVLLEVLSLAHAGSVGFSVEEVVLACRSLQKI
AEQVQDTEETGQCFHELIIPRLLSLALQAALQGEGSSGRRSPLVEEVVLSAVVSVISTSC
SRLQPKLAGQTAARAVSLFLDDDVSFLPDNSFPSHIQLLKQPQRESWSQSQMVCLLMGCV
CSLPRSVAVPQIDQLLSQLEEMSCTCNHPLAYTSAAKCFAGLINKQSQGDSLDSLIQRTM
KRVCGELDSTSSPARTQAFTLMIWVAKGLLLRYHPMSTALTDKLFSLLDDADLGAMAAEG
FSLLMSDSAEVLNRGCHADVRIMYRQRFFSENSAKLVQGFNAAPQEKKSNYLKALSNIVN
KLPKQVQITELPALLSLLLEALSCPDQGVQLSTLSCLEPVLIDPPPALIQQLEALFSRLL
ALVSSPTMSVKITSLRCIHALSHLPTHEIFPFRARVLRALARPLDDKKRRVRSEAVLARG
EWYLVGSPGGR
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacagctccttgctgctgtctctggtggaggaatttgtctcgggactccag
gacagcaaggccaaagacaccgcgacaggtgtcaaagatggacagtttacagtcctgcag
ctggtggaggcactgggactgagtttgacgagctctcagcctcacactcgagccagaggg
gtccagctgctgtctgaggttttgcacgagtgctatggaaatcttacagagagagaagtg
gaagtgctgattgccttctatgaaaaccgcctaaaggaccattacgtcatcacaccatcc
gtcttacaggggctcagagctctgacaaaatgtgcggcgttgcctcctggctcagccgtg
tccatgctgaggtctttgttccaggatgttcacgtacagtctctgatgctggcagagagg
tcgtgcgtctacagcatgctcatcaacctcatggagaccagagaggctgagctgaagggt
ttaggggcagactttgtctttggctttgttcagtcaatggatggtgagagggatcctcgc
aacctcctgctcgccttccagattgcaaagagcatcatacatcgaggctatgatctaggt
aaattcacagaggagctgttcgaagtgacgtcctgctacttccccatcgacttcaccccc
ccttctaatgacccccacggcatcaccaaggacgacctaatcgaggcgctgcgggccgtc
ctctccgggacaccaaagtttgcagagttcgtgttgcctctcatcattgagaagctggac
tcggacgttcagagtgcgaagctggactcgctgcagactctgacttcctgtatgtcacaa
tatgaacataaggacttggcagaattccttgagggactgtggacatcactgcgcagagag
gtgtttcagacatccagcgagaggatcgagtgtgcaggcctcgccgctctcaccgcactc
acttcctgtctgtctcgctcagtcctcaactctgactctgaagactctctcagcaccttc
ctggttcttgttctcacagactgcaaacatcatctgtgtgagccggacctgaagctcgtg
tggcccagcgccaagctgctgcaggccgcatgcagtgcgtccagcagggcaagccacatc
atcacagccgctgtcatgcccgctctcgtcgagcagtacagcagcagaacacagtgttcc
catagacgaacgttactggaggtggtgctgcggttcatcgagtcagtgacaagcagtcag
tcctcagagaacgaagagagcatgtttttagcctttcgccagtctctgtgtgacatggtg
ttctcagccttgttggagactaattccagtctgcagatcactgccacctccatgctcacc
tcactggcacagcaaacaggtctgctgttggacgctgatatcgagctggctgtggatcac
ctgaccagactgctgctgaccgaggaggatgagaaagtcagtgttgctgtggtcgattgt
gccggagccttggcagagctacacccaacaatctttatcactaaattcatcccaagacta
aagaaggagatgttttctgagcccatggatcaagacaacaacagagaagcttctgagcaa
cattctcatcatgcagtgcgtaagcagtgtttgtctgccctggctgcggtgtccatccga
cccagtgttgtccaggagagcacgcctgtcctcctggaggtcctcagcttggcacacgca
ggtagcgtcggtttctcagtggaggaggtggtgttggcgtgccgcagcctccagaagata
gcagagcaggttcaggacactgaggagacagggcaatgcttccatgaactcatcattcca
cgcctgctctcactggcgctccaagcggccctgcagggtgaggggtcttctggtcgtcgt
agtcctctggtagaggaagtggtcctgtctgctgtggtctctgtcatcagtacctcctgc
tccaggctgcagccaaagttggcgggacagacggcggctagggctgtctctctcttcttg
gacgatgatgtctcctttttgcccgacaactccttcccctcacacatccagctgctcaag
cagccgcagagggagtcatggagccagtcacagatggtttgtctgctcatgggctgcgtc
tgttccttacctcgcagtgtcgcggtgcctcagatagaccagctgctgtctcagctggag
gagatgagctgcacctgtaaccaccctctcgcatacacctctgctgcgaagtgcttcgct
gggctgatcaacaagcaatcgcagggtgattctctcgacagcttgattcagaggacgatg
aagagagtgtgtggagagctggactctacatcgtcacctgcccgcactcaggcattcacc
ctcatgatctgggtggccaaaggtttgcttcttcgataccaccctatgtccacagcactg
actgacaagctcttctctctgctcgacgacgctgatctgggtgcgatggcggcagaaggt
ttctcgttgctgatgagcgactctgccgaggtcctaaaccgcggctgccatgccgacgtc
cgcatcatgtaccgccagcgcttcttcagtgagaactcggcaaagttggttcagggcttc
aatgctgcgccgcaagagaagaagtccaactacctgaaggctctgtccaacatcgtcaac
aaacttccgaagcaggttcaaatcactgaactaccagcgctcctgtccctgctgctagag
gccttgtcgtgtcccgatcagggcgtccagctgtccaccctgtcctgtctggagcccgtc
ctcatcgacccaccgccggctctcatacagcagctggaggctttgttcagcaggttgctg
gccctcgtctccagtcctaccatgagcgtaaagatcacctcgctgcgctgcatccacgcc
ctctcccacctgcccacacatgagatttttccatttcgggcgcgggttctgcgagctctg
gctcggcctctggacgacaagaagaggagggtgaggagcgaagcggtactggcacgaggg
gagtggtaccttgtgggaagtcctgggggaaggtga
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