Hippoglossus stenolepis (Pacific halibut): 118101032
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Entry
118101032 CDS
T08308
Symbol
bbs1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118101032 (bbs1)
Cilium and associated proteins [BR:
hsp03037
]
Primary cilia and associated proteins
BBSome
118101032 (bbs1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
BBS2_Mid
PHTB1_N
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
118101032
NCBI-ProteinID:
XP_035002546
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All DBs
Position
21:20332657..20336836
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AA seq
581 aa
AA seq
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MSESSSDGGKWLDAHYDPVAGLFTFSSCVDLADLSGDGESRLVVGDLGSGSSGMKLKVYR
GTALLSESTLLDLPSGLVAFFMDLHEPRIPAVAVASGPCVYVYKNLRPYFKFTLPGLEVN
TLEQDVWQQAREGQIDPLTLKEMLESIRKKADVPLSVRSLRFLSLETNDMDEFVQLHKQQ
PIRRQTVITCIGTLKKSTADEDGVSCLVIGTESSDVYILDPEAFIILSKMTLPAPPTMMD
VTGQFDVEFRITVACRNGNIYILRRESDKPKYCVELASHPVGLVRVGKNVVVGCTDESLQ
GFTQKGKKLWQTILPAPITTMAAMDLPTRGFQAVLVGLANCEVQLYRDKNLLSTIKTPDV
ITSICFGRYGREDGTLIMTTKGGGLMVKILKRTAAFDDRDTAPGPPLAQSVRLNVPKKTK
LYVDQTLRERENGVAMHRAFQMDLSRMRLAAAKAYVKALESSLSPVSSSLSEPLKMNAVV
QGLGPSFKLTLNVQNTAACRPVMDLAISFLYDESLYRMRNPYMRIPLLVPGLVYPVETFV
ECTSDKGISDIIKVFVLHKGKSCPLLTAHINMPVSEGLMLN
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtcgagcagtgatggagggaagtggttggacgctcactatgacccagtggcg
ggcctcttcaccttctcgtcttgcgtggacctggcggacctgagcggggacggggagagt
cggctggtggtcggcgacctgggctcaggttcatcaggcatgaagctgaaggtgtaccgg
gggacggcgctgctgagtgagagcaccctgctggaccttccctctggccttgtcgccttc
ttcatggacctgcacgagccgcgcatccccgctgtcgctgtggcgtccggaccctgcgtc
tacgtctacaagaacctgaggccgtacttcaagttcacgctgcccggtctggaggtcaat
acgctggagcaggacgtgtggcagcaggcgagggagggtcagatcgaccctctgactctg
aaggagatgttggagagcatcaggaagaaggcagatgtcccactgtccgtacgttcgctc
aggtttctctctctggagaccaacgacatggacgagttcgtccagctacacaaacagcag
ccaatcagacgacagacggtcatcacctgcatcgggactctgaagaagagcacggccgat
gaggacggcgtcagctgtttggtgatcgggacagagagcagcgacgtctacatcctggac
cccgaggccttcatcatcctgtccaagatgacgctgccggctcctcccaccatgatggat
gtgacgggtcagttcgacgtggagtttcgcatcacggtggcgtgtcgcaatggaaacatc
tacatcctgcgcagggagtcggacaaaccaaagtactgcgtcgagctggcgtctcacccg
gtgggtctggtcagagtcgggaagaacgttgtggtcggctgcaccgacgagagtctgcag
ggtttcacgcagaaggggaagaagctgtggcagaccatcctccccgctcccatcaccacc
atggcggccatggaccttcccacacgggggttccaggcggttctggtgggccttgctaac
tgtgaggtgcagctgtaccgagacaagaacctgctgagcaccatcaagacgccagatgtg
atcaccagcatctgctttggccggtacggacgcgaggacgggacgctgatcatgaccacc
aagggaggtggcctgatggtaaagatcctgaagaggacggcggcgttcgacgacagggac
accgcccctgggccgccgctggcccagagcgtccgcctcaacgtgcccaagaagaccaag
ctgtatgtggaccaaacgctgcgggagcgagagaacggtgtggccatgcaccgcgccttc
cagatggacctgagccgcatgcgactcgctgctgccaaagcttatgtcaaggccctggag
tccagcctgtcgccggtgtcctccagcctctccgagccgcttaagatgaatgccgtggtt
cagggtctgggtccatccttcaaactgaccctgaacgttcagaacacggcggcctgtcgg
cccgtcatggacctggccatcagcttcctgtacgacgagagcctgtaccgcatgaggaac
ccatacatgaggatcccactgctggtgcccggactcgtctaccccgtcgagaccttcgtg
gagtgcaccagcgacaagggcatctctgacatcatcaaggtgttcgtcctgcacaagggg
aagagctgccccctgctgaccgctcacatcaacatgccagtgagcgagggactgatgcta
aactga
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