Hippoglossus stenolepis (Pacific halibut): 118101098
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Entry
118101098 CDS
T08308
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118101098 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118101098 (usp42)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118101098 (usp42)
Peptidases and inhibitors [BR:
hsp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118101098 (usp42)
Ubiquitin system [BR:
hsp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118101098 (usp42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
118101098
NCBI-ProteinID:
XP_035002656
LinkDB
All DBs
Position
21:8289510..8300881
Genome browser
AA seq
1203 aa
AA seq
DB search
MTIVDRSSEKSDHESVGCNRSPFTSGDAGMDGSCSSSWAVGPTMPSDSPRLKAPGGCLGP
TPGAAVYNSTLSSVDRPKEQVISNGDGIELPQKVLFPPDRLILKWTQVHRIGAGLQNMGN
TCFLNSALQCLTYTSPFANYLLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIG
VLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATSFIHQVFGGYLR
SRVKCLNCKAVSDTFDPFLDITLEIKTASSVSKALEQFVKPEQLDGENAYKCTKCKKMVT
ASKRFSIHRNATVLTLSLKRFANFSGGKITKDVKYPEYLDLRSFMSQTQGESQLYGLYAV
LVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRTVLNQQAYVLFYIKSSDGKKTV
DYSHMNHNPGIPGQSSPRPVVIPRINTTVHQNNIGFIGPQLPPHMTKSTLYVNGNGSLRD
YPTSSKPSTSSSAVGKPNHGLASSSSSISHSISRPTMIPDHDKRQKLSFFIGQSKQNRPS
SSSSSSSCSQPSSASGSSSSSLSSSQSTSDVHSDVRFIPRQLHHVNGMSCSNGDHHTGGN
GASFLVPYGQESSEESDQENCGALENGCLAKSHLNGNNRTGGVFEKSPQATNRESEVHHN
GNGLLYGVSKSGQNGHHYGQHKMNGHYTSDKICGSDHGSLSSGATIAANGVDGDHSPTSK
EAYNSASSSQTCSSRSIHPAASESQHLSPPHKRAKSVSEPLPQHTAPSTVSIPPSATATK
THSVASGESASSSAHHGNPAALSSPADRSESTTGASAAPQKVSVSGDESKNLPQKNGPSA
GMEGRTDAKEQQQSKPSSSGSDGQYSRDRDRLHSDWSRERHYRDRSEERESDGDRHRHRR
DHREHRHNHRLHSDHLSPHDRHYRDWDSERRYERTVHHPRERNRDRSSHHYHRHRSREDW
DCERRGNGHSHREESRSRSRWQQESRESRVTKEKSNGRERNSYPSKEETSFPATVSETSA
KYKGSPPLPPLSMSRSAPNTDDQNHKRTADNLSKERDESPEARHSKKHKKSKKKKKSKDK
DRHRESGSSDVDSDRIAEIKKKKKKNRRQRDGEAKQQSPGAAPRHKNRSSEERESCKRSY
YDTKDATHNYGFLPEKRRRIDYADPRIDHLPPPQPISATNGSTHRHLNGHTGNGYSRTNG
NSH
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagaaaagtctgaccacgagtcagtcgggtgtaaccga
tctcccttcaccagtggagacgcggggatggacggcagctgttccagcagctgggcggtg
ggtcccaccatgccgagtgactctcctcggctgaaggctccaggaggctgcctgggcccg
acacctggagctgccgtctacaacagtactctctcatctgtggaccggcccaaggagcaa
gtgatcagcaatggtgacggcattgagttgccgcagaaggtcctcttccctccagaccgc
ctcatcctgaagtggacccaggttcaccgtatcggtgccggcctgcagaacatggggaac
acatgcttcctcaactcagcgctgcagtgtctcacctacacgtctccatttgctaactac
ttgctgacacgcgagcactctaaaacatgtcacgagccggggttctgtatgatgtgtacc
atgcaaaaccacatcattcaggtctttgccaactctgggaatgtcatcaagcccattggt
gtgctcaatgagctcaaaaggatcgcaaagcacttccgctatggaagccaagaggatgcc
catgaattcctgcggtacacagtggatgctatgcaaaagtcctgcttacctggaaccaaa
ttggacaggcagacacaggcaacctctttcatccatcaagtatttggcgggtacctaagg
tccagagttaaatgtttaaactgcaaagcagtctcagatacatttgacccctttctagat
atcactctggaaattaagacggcttcaagcgtctcaaaggctctggagcagtttgttaag
ccggagcagctggatggagaaaacgcctacaaatgcaccaagtgcaaaaaaatggtcaca
gcctcgaagagatttagcatccaccgcaacgccaccgtgctcaccctctcactcaaacgc
tttgcaaacttcagtggaggcaaaattacaaaggatgtaaaatatccagagtacctggac
ctgcggtcgttcatgtctcagactcaaggagagtcccaactctacggcctgtacgctgtg
ctggtccactctggattcagctgtcacgctggacactacttctgctatattaaggcgagc
aatggtcagtggtatcagatgaacgactcctctgtgtccgtcagcgacatcaggactgtt
ctcaaccagcaggcctatgtccttttctacataaagtccagtgatgggaaaaaaacagtg
gactacagtcacatgaaccacaaccctggaatccctggtcagtcgtcaccacgtccggtg
gtgataccacgcatcaacaccaccgtccatcaaaacaacattggctttataggtccccag
ctgcccccacacatgaccaagagcactctctatgtcaatgggaatggatcgctgagggac
tatcccacaagctccaagcccagcaccagcagtagtgctgtaggaaaacctaaccacgga
ctggcctcttcctcctcctccatctcccactcaatcagccggcccacaatgatcccagac
catgacaaacgtcagaagctttcatttttcattggacaaagcaagcagaaccgcccatcc
tcctcctcctcctcatcctcttgcagccagccttcctctgccagcggctcctcctccagc
tctctatcctcctcacagtctacctcagacgtccactcagacgttcggttcattccacgt
cagcttcaccacgttaacggcatgtcttgcagtaacggcgatcaccacactggaggtaat
ggagcatcattcctggtgccgtacggccaagagtcttctgaggaatcagaccaggagaac
tgtggcgctctggagaatggctgcttagctaagtctcacctcaacggtaacaacagaaca
ggaggcgtctttgagaaatctcctcaagccacaaacagagagtcagaagtgcaccataat
ggtaacggattattgtatggcgtctctaaatcaggccaaaatggacaccattatggacaa
cacaaaatgaatggacactacacctctgacaagatctgtggcagtgatcatggatctttg
tcctcgggggctaccattgctgctaatggtgtagatggtgaccatagtccaacaagcaaa
gaggcgtataattcagcctcgtcatcacagacctgttcttctcggagcatccatcctgct
gccagtgaaagccagcacctctcccctcctcacaaaagggctaaaagtgtgtctgaaccc
ctgcctcagcatacagcaccctccactgttagcattccaccttcagctactgctacaaag
acccattctgttgcatctggagaatctgcttcctcctcagcacatcatggcaaccccgcg
gccttatcctccccggcagaccgctccgagagcaccactggggcatctgctgctccacag
aaggttagcgtaagtggggatgaatccaagaatctaccacagaaaaacgggccgtcagca
gggatggaaggaagaacggacgccaaggagcagcaacagtccaagcccagttctagtggc
agcgatggacaatattccagagacagagacaggctgcactctgactggagcagagagaga
cactacagggaccggagtgaagagcgggagagtgacggtgatcggcatcggcacagacgg
gaccaccgagaacaccgccacaatcatcgcttgcacagtgatcatttgtctcctcatgat
cgacattacagagactgggactctgagcgtcgctatgagcggactgtccaccaccccagg
gagcgcaatcgcgacaggtcctctcaccattaccaccgtcatcgatccagagaggattgg
gactgtgagcggagggggaacggtcactcccaccgcgaggagtctcgcagtcgctcgagg
tggcagcaggagagtcgagaatcccgggtaacgaaggaaaagagcaacggcagggagagg
aactcttacccttcaaaagaggagacttcctttcctgccacagtgtcagaaacatcggca
aagtacaaaggctcgccgcctctgcctcctctctccatgtcgagatcagctccaaacaca
gacgatcaaaatcacaagaggactgctgataatctgagcaaggagagagacgaaagccct
gaggcccgtcactctaaaaaacacaaaaagagcaagaagaaaaagaagtcaaaggacaaa
gacagacacagagagagcggaagctctgacgtggattcagacagaattgctgaaataaaa
aagaagaagaagaaaaacaggcggcagcgggatggcgaggccaagcagcagagcccaggc
gccgcaccgagacacaagaacagaagcagcgaggaacgggaaagctgcaagcggagttac
tatgacaccaaggacgctacacacaactatggttttttaccagaaaaacgccggcgcata
gactacgctgatcctcgcattgaccatctacccccccctcagcccatttcagccaccaat
ggttcaactcaccgccatctcaatggacacacaggaaacggttacagtcgaaccaatggc
aactcccactga
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