Hippoglossus stenolepis (Pacific halibut): 118101108
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Entry
118101108 CDS
T08308
Name
(RefSeq) vacuolar-sorting protein SNF8 isoform X1
KO
K12188
ESCRT-II complex subunit VPS22
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118101108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118101108
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118101108
Membrane trafficking [BR:
hsp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
118101108
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118101108
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
MarR_2
CDK5RAP3
DotZ
MarR
DUF4896
Motif
Other DBs
NCBI-GeneID:
118101108
NCBI-ProteinID:
XP_035002674
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Position
21:3291492..3295789
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AA seq
258 aa
AA seq
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MHRRGVGAGAIAKKKLAEAKYKERGNVLAVDQIVQMSKQLETFKSNLEEFASKHKQEIRK
NSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LDELHQRVLKGRGKYAQDVSQDDLMRAIKKLKVMGNGFGMIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVTVGEIKESLKWEKERACHVLDHLLKEGLAWLDAQAAGEAQYWLPALF
SELTSCDVTPEEANQMTP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggagaggagtcggggcgggagctattgctaaaaagaagctggcagaggccaaa
tacaaggaaagaggaaatgttcttgcagtggatcaaattgtccagatgtccaagcagttg
gagacgttcaaatcaaacctggaggagtttgccagcaagcacaaacaagaaattcgaaag
aactcacagttcagggttcagttccaggaaatgtgtgccaccatcggagttgacccactt
gcctctgggaaagggttttggtctgagatgcttggagtcggtgacttctattatgagctc
ggggtgcagattattgaagtgtgcctggccctgaaacacagaaacggagggctcattacg
ttggatgaactccatcagagagtactgaaaggacgaggtaaatacgctcaggatgtgagc
caagacgacttgatgagagccataaagaagctgaaggtgatggggaatggttttgggatg
attccagtcggtggctcttacttggtgcagtcagtcccagcagagcttaacatggaccat
actgtagttctccagctggctgagaaaaagggatacgtcacagtcggtgagatcaaggag
agcttgaaatgggagaaggaacgggcttgtcacgtcctggatcacctgctgaaagaaggc
ttggcctggttggacgctcaagcagctggcgaggcacagtactggctacccgctctcttc
tccgagctcacgtcctgtgatgtcacaccagaggaagccaatcagatgacaccctaa
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