Hippoglossus stenolepis (Pacific halibut): 118101277
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Entry
118101277 CDS
T08308
Symbol
chrna6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04080
Neuroactive ligand-receptor interaction
hsp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118101277 (chrna6)
04082 Neuroactive ligand signaling
118101277 (chrna6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118101277 (chrna6)
Ion channels [BR:
hsp04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
118101277 (chrna6)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Red1
Motif
Other DBs
NCBI-GeneID:
118101277
NCBI-ProteinID:
XP_035002777
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Position
2:complement(6775814..6799613)
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AA seq
518 aa
AA seq
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MQPAARRTLLLLLVVLLTQDCFSSKAEDRLFKKLFRRYNQFIRPVENVSDPVTVEFEVSI
SQLVKVDEVNQIMETNLWLRHIWNDYKLRWMPVEFDGIEFIRVPSNKIWRPDIVLYNNAV
GDFLVADKTKALLKFDGTITWVPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPGWVRSVFLKVLPRIMLMRRPIDEASKAGG
LDSSGEVGGAGGGGGGGGGKKKKKNLMQQVGGGSLNCLEFGDSKLSSVEGCTGKKCPCPC
KHGNESAETPDKMPRQLSPQSINTVVAFSVVSPEIKQAIESVKYIAENMRSRNKAKEVED
DWKYVAMVIDRIFLWVFVTVCILGTTGLFIQPLFGFFS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcagccggcggccagacggactttgctgcttcttctagtggttttgttaacgcaagac
tgcttctcatccaaggcagaggaccggctgttcaagaaactgttcagaagatacaaccag
ttcatcagaccagtggagaacgtctccgaccccgtcactgtggagtttgaggtttccatc
tcgcagctggtcaaagttgatgaggtgaatcagatcatggaaacaaacttatggctcaga
cacatatggaatgactacaagctgcgatggatgccggttgagtttgacgggattgagttc
attagagttccatcaaacaagatctggagacctgatattgtgctctacaacaacgctgta
ggtgatttccttgtggctgataagaccaaggctctgttgaagtttgatggcaccatcacc
tgggttcctccggccattttcaaatcctcctgccccatggacatcacctattttcccttt
gactatcaaaactgctccatgaagtttggctcctggacgtatgacaaagcgaagattgac
ctggtacttattggatccaaggtgaacctgaaagacttctgggagagcggcgagtgggaa
atcatcgatgctccgggctacaagcatgatatcaagtacaactgctgcgaggagatctac
ccagacatcacctactccttttacatccggcgcctgccactcttctacaccatcaacctc
atcatcccctgcctcctcatctctttcctcacagtgctggttttctatctcccgtccgac
tgtggagagaaggtcacgctctgtatctccgtcctgctctccctcactgtgttcctgctc
gttatcaccgagaccatcccctccacgtcgctggtcatcccgctcattggagagtacctg
ctcttcacaatgatcttcgtcaccctcagcatcgtcatcaccgtgttcgtgttgaacgta
cactatcgcacaccgatgacccacaccatgccgggttgggtgcgctcggtgtttctcaaa
gtgctgccgaggattatgctgatgcggagaccgattgatgaagccagcaaggctgggggg
ttggacagcagtggggaggtaggaggagctggagggggaggaggaggcggaggagggaag
aagaagaagaagaatttaatgcagcaggtcggaggaggctccctcaactgtctggagttt
ggggacagtaagctgtcctccgtggagggctgcactgggaagaaatgcccttgcccgtgc
aagcatggaaacgagagcgcagagactccagacaagatgccgcgtcagctgagtccgcag
agcatcaacacggtggtggccttttctgtggtttcacctgagattaaacaggccatagag
agcgtcaagtacatcgctgagaacatgaggagccgcaacaaggccaaagaggtggaggat
gactggaagtacgttgccatggtgattgatagaatcttcctttgggtgtttgtgaccgtc
tgcatcttgggaaccacaggcctcttcatccagccgctttttggcttcttctcataa
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