Hippoglossus stenolepis (Pacific halibut): 118101289
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Entry
118101289 CDS
T08308
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118101289 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118101289 (nup107)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118101289 (nup107)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118101289 (nup107)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118101289 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
DUF3990
DUF4485
Motif
Other DBs
NCBI-GeneID:
118101289
NCBI-ProteinID:
XP_047194610
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Position
22:17162837..17169833
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AA seq
908 aa
AA seq
DB search
MNWGQSELPSPVVRDDEVTVAARRRRKKVAFPSPGGGSPVFSSVTPARSLRNTPASLFRQ
TVTPRVPDVSSILAPGGRTPRYTHTPRNTLGSQNLDDSDWTHSMFTSPLAGLENTSFFTE
DVGNLSSALLKEDDPGEAAAASLFPEFLASFLKHSSSAVFELLEDYQTLCQDKVDVLQSV
VLRAGQNSKTAGVRWLLLQESSSWRLITSLYRDRVQLALEDDITMLDIVPSESEKVVVEQ
LFQRDAVIRQSQLVVDWLECIAKDQIGDFSDNIEYYAKNVCWENTLHALKMRRKSGAGFT
VPLVTELDPDAPLRQQRPLADLDREDDARLLKNLFTLIRAGMTEEAQRLCKRCGQAWRAA
TLEGWKLYHDPNMTSGSIELQPVEGNPQRGIWKACCWRMAEEEQLNRYERAIYASLSGNL
KPLLAVCESWEDCVWAYFRVMVDSLVEKDLMSSGMAHQEVESLPREYLEANWTMEKVFEE
LQASESKRVLEETGEHYHVIQKFAILGDLDGLLEEFSDWLKSSKPLPSHLLRFMSHLLLF
FRSLGLALKEELCVDVLKSYVTLLIQDQQTDLVASYVGQLPAELGTVQYAAFLETVTQAE
LRPRCLQLATEAGLDVSAITKLVVETVRERDDTVFTHHNQTLETATTKEDQRKIEVIDWL
LFDPAHRAEALKQSNAIMRKFLALQKHDAAKAVFSKVPEDSMKEICCQWAGIGQATLPAE
DENAIREHLCIRAYLEAHEAFTDWFSHSSSAPQKPAPVPEAKFTERVANEMREKEYQSSF
SSWSCRLDVLTEDVKERIYNVLLFVDGGWMVDNRQDSEQDSERGHQMVVLRSLCLPRLSF
LLLSVLQNSTRHQEALRLADIISSDQHRLYQVFSKEELRRFLQKLRESSLSLLDRGLDPL
GYELQPSI
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaactggggtcagagtgagctaccgtctcctgtggtgcgagatgacgaggtgacggtc
gctgcccgcaggagaagaaagaaggtggccttcccgtcacccggcggtggcagcccggtc
ttttcctcagtgacaccagcccgctccctgcggaacactcctgcttccctgttcagacag
actgtaactcccagggttccagatgtttcctccattttggctccagggggccgaactcct
cgatacacacacacgcccagaaacacactcggcagtcagaatctggatgacagtgactgg
acccacagcatgttcacgtcccctcttgcgggtctggagaacaccagcttcttcacagag
gacgtcggcaacctcagctcagccctgctgaaggaggatgacccaggagaagccgccgct
gccagtcttttcccagagttccttgcatcttttctgaaacactcttcctctgcggtgttt
gagctcttggaggattatcagacactctgccaggacaaagtggacgtgctgcagtctgtg
gtcctcagagcaggtcagaacagtaaaacagcaggagtccgctggctgctgctgcaggag
agcagctcctggagactcatcacctcgctctacagggaccgggtccagttggctctggaa
gatgacatcaccatgttggacattgttcccagtgagagtgagaaggttgtggtggagcag
ctctttcagcgagacgctgtcattcgacagagtcagctggtcgtcgattggctcgagtgc
attgccaaggatcaaatcggagatttttctgataatatagaatattatgccaaaaatgtc
tgctgggagaacactcttcatgcgctgaagatgaggaggaagagcggcgctggtttcacg
gttcctctggtcactgagctggacccagacgctcctctccggcagcagcgccccctggct
gatctggacagagaggacgacgcccgactgctgaagaatctgttcaccctgatcagagcg
gggatgacggaggaggctcagaggttgtgtaaacgctgtggtcaggcctggagagcagca
actctggaaggatggaaactttaccacgatcccaacatgacctcaggcagtatcgagttg
cagcccgtggaaggaaaccctcagagaggaatctggaaggcctgctgctggagaatggct
gaggaggagcagttaaacagatacgagagagcgatctacgccagcctgagtggaaacctc
aaaccgctcctggcagtgtgcgagtcatgggaggactgcgtgtgggcgtacttcagagtg
atggtcgactcgctggtggaaaaggatctgatgtcatcgggtatggcccaccaggaagtg
gagtcactgccgcgagaatacctggaggcgaactggacgatggaaaaggtgtttgaggag
cttcaagcctcagaatcgaagagggtgttggaggagacgggggagcattaccacgtcatc
cagaagtttgccatcctgggagacctggacggtctgttggaggagttttctgattggctg
aagtcctctaagcccctcccctcccacctgctgcgcttcatgtctcacctcctgctgttt
tttcgctctctgggtttggcactgaaggaggagctgtgtgtggacgtgttgaagtcgtat
gttacccttctgattcaggatcagcagaccgacctcgtggcgagttacgtcggccagctc
ccggccgagctcggcacagttcagtacgccgccttcttggagaccgtcacccaggcggag
ctccgcccccgctgtctgcagctcgccactgaagctggcctggacgtctctgcgatcact
aagctggtggtggaaactgtgagggagagagacgacacagtgtttacacatcacaaccag
acgctggagacggcaactacaaaggaggaccaaaggaagatcgaagtcatcgattggctg
ctgtttgaccccgcccatcgagctgaagcccttaaacagtccaacgccatcatgaggaag
tttctggcgttgcagaaacacgatgcagcgaaggccgtgttctctaaagttccagaggac
tcgatgaaggagatttgttgccagtgggcgggaatcggtcaggccaccttacccgccgag
gatgagaacgccatcagagaacacttgtgtatcagagcctacctggaagctcatgaggcg
ttcactgactggttcagtcacagtagctccgccccccagaagccggcaccagtgccagag
gccaaattcaccgagagggtcgccaatgagatgagagagaaggagtaccagtcgtccttc
tcctcctggtcctgtcgcctggacgttctgactgaagacgtgaaggaaagaatctacaat
gtgctgctgttcgtcgatggaggatggatggttgacaacagacaggattcagagcaggac
tcggagcgcggtcaccagatggtggtgttgcgttctctgtgtcttcctcgtctcagcttc
ctgctgctcagcgtgctgcagaactccaccagacaccaggaggcgctgcgtctagccgac
atcatctcatctgaccagcaccgtctctaccaggttttctccaaagaggagctgaggagg
ttcctgcagaagctgagggagtcgtctctctctctgttggacagaggactcgacccgctg
ggctacgagttacagccatcaatttaa
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