Hippoglossus stenolepis (Pacific halibut): 118101298
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Entry
118101298 CDS
T08308
Symbol
snd1
Name
(RefSeq) staphylococcal nuclease domain-containing protein 1 isoform X1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
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Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
Motif
Other DBs
NCBI-GeneID:
118101298
NCBI-ProteinID:
XP_035002811
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Position
22:13015224..13188229
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AA seq
922 aa
AA seq
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MASVSAPAQAAPAPSAHLQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGPMAR
RAAQGQPDTKDTPDEPWAFQAREFLRKKLIGKEVCFTVEIKTSQGREYGMVYLGRDTTGE
NLAESLVNEGLATVRREGIRGNNPDQARLCELEDQSKSSKKGQWSEGGGTHTIRDMKYTI
ENPRNFVDSLHQKPINAIIEHVRDGSVVRALLLPDHYLVTVMLSGVKCPSFRREPDGGET
PEPFAAEARFFTESRLLQRDVQIVLESCPNQIILGTILHPNGNITELLLKEGFARCVDWS
MAVYTQGAEKLRAAERSAKERKVRIWKDYVAPTANLDLKDRQFVAKVMQVVNADAMVVKL
NSGEYKTIHLSSIRPPRIEGEEKNKDKDKRFRPLYDIPYMFEAREFLRKKLSGKKAKSLF
VVFIGEVNVTVDYIRAATGPGEGTPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQD
DDQRSSHYDELLAAEARAIKNGKGLHSKKEVPIHRVADISGDTQKAKQFLPFLQRAGRSE
AVVEYVFSGSRLKLYMPKETCLITFLLAGIECPRSSRNTPGGVQVAEPFSEEAMLFTKEL
VLQREVEVEVESMDKAGNFIGWLHIEGVNLSVALVENALSKVHFTAERSGYYKTLVSAEE
GCRERKEKVWSNYEEKPVEEVVHVKEEKERVENYRPVFVTEIADTLQFYAQDVETGGQLE
GLMETMRAEIAAQPPVEGSYAPRRGDHCIAKFADGEWYRARVEKVESPAKVHVFYIDYGN
REVVSSTRLAVMPPAFSTRTLPAQATEYAFAFIQVPQDEDARADVVDCVVRDIQNSQCLL
NVEYSGATCSHATIQFGDTKNDVGLGLVKEGYVMVDVRKDKYLQKIVTEYLNSQESAKSA
RLNIWRYGDFRGDDAEEFGYRR
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtttcggcaccagctcaggcggcccccgctccgtctgctcatctgcagcgg
gggatcgtgaagatggtcttgtcgggctgtgctatcattgtgcggggccagcctcgaggc
ggcccgcccccggagcgtcagatcaatctcagtaatatccgagcggggcccatggcccgc
cgagccgctcagggccagcccgacaccaaggacactcccgatgagccgtgggcctttcaa
gccagagagttcctgcggaagaagcttatcggcaaagaagtttgcttcactgtggaaatc
aagacctctcagggcagagagtacggcatggtctacctggggagagacacaacaggcgag
aacctcgctgagtctttggtgaacgagggcctcgccacagtccgcagggaaggaatcaga
gggaacaatccagaccaggccagactgtgtgaattggaggaccagtcaaagtcttccaag
aagggccagtggagcgagggcggcggcacgcacaccatccgggacatgaaatacaccata
gagaatccccgcaacttcgtcgactccttgcaccagaaacctattaacgccatcatcgag
catgtgcgtgacggcagtgttgttcgtgccttgctgctccccgaccactacctggtcacc
gtcatgctgtctggagttaagtgtccctcgttcaggcgggaaccggatggcggggagaca
ccagagccgtttgcagcagaggccagattcttcaccgagtcccggcttctgcagagagac
gttcagatcgtcctggagagctgccccaaccagatcatattgggcaccatccttcacccg
aacgggaacatcacagagctcctgctgaaggaaggattcgcccgctgcgtggactggtcc
atggccgtttacacccagggagccgagaaactcagagctgctgaacggtctgctaaagag
cgcaaggtccgcatctggaaggactacgtcgcgcccacagccaacttggacctgaaggac
agacaatttgtagccaaggtgatgcaggtggtaaatgctgacgccatggtggtcaagctc
aactccggggaatacaagaccatccacctgtccagcatccggcccccaaggattgaggga
gaggagaagaacaaggacaaagacaaacgtttccgtcccctgtatgacatcccctacatg
ttcgaggcccgggagttcctgaggaagaagctcagtggtaaaaaggcaaaatcgctgttt
gttgtgtttatcggagaggtcaacgtgacagtggactacatcagagcagctaccggccca
ggagaaggcacccctgccttctcagaacgcacctgtgctacagtcacaatcggcggcatt
aacatagcagaggctctggtcagtaaaggcctcgccacggtgatcagatacagacaggac
gacgaccagcgctcctcccactacgacgagctgcttgctgcagaggctcgggccatcaaa
aacgggaaaggcctgcacagcaagaaggaggttcctatccacagagtggcagacatctct
ggggacacacagaaagccaagcagttcctgcccttcctgcagagggccggccggtcagaa
gcggtggtcgaatacgtcttcagcggctcccgcctcaagctgtacatgcccaaagaaacc
tgcctcatcacattcctccttgccggtatcgagtgtccacgcagctccagaaacacgccc
gggggcgtgcaggtggccgagcccttcagcgaagaggccatgctgttcaccaaagagctg
gtgctgcagagggaggtggaagttgaagtggaaagcatggacaaagcagggaacttcatt
ggctggctgcacatcgagggtgtgaatctgtcggtggcgctggtggaaaacgctctgtcc
aaggtccacttcacagcggagcgcagtggctactacaaaaccctcgtctcagcagaggag
gggtgccgagagaggaaagaaaaggtctggtccaactatgaggagaaaccagtcgaggag
gttgtgcacgtgaaagaggagaaggaacgcgtggaaaactacagaccagtattcgtcacc
gagatcgccgacaccctgcagttctacgcccaggacgtagagacaggaggccagttggaa
ggtctgatggagaccatgagagcagagatcgccgcccagcctccagtggaaggatcctac
gccccgcgccgaggggaccactgcatagccaagttcgctgatggcgaatggtacagagcc
cgagtggagaaagttgagtcgccggcgaaggtgcacgtcttctacatcgactatggcaac
agagaagtggtgtcgtccacccgtctagctgtcatgccccccgccttcagcaccaggacc
ctgccagcacaggccaccgagtatgccttcgccttcatccaggtcccacaggacgaggac
gcccgtgcggacgtggtggactgtgtggtgcgggacatccagaacagccagtgcctgttg
aacgtggagtactcgggggccacctgctcacacgccacgatacagttcggggacaccaag
aacgacgtcggcctcgggctggtcaaagagggatacgtcatggtggacgtccgcaaggac
aagtacctgcagaaaattgtgacagagtacctgaacagtcaagaatctgctaagagtgcc
aggctcaacatttggcgctacggagacttccgcggcgacgatgccgaggagtttggatac
aggcgttaa
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