Hippoglossus stenolepis (Pacific halibut): 118101376
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Entry
118101376 CDS
T08308
Symbol
ptprz1b
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsp01009
]
118101376 (ptprz1b)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hsp00535
]
118101376 (ptprz1b)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
118101376 (ptprz1b)
Protein phosphatases and associated proteins [BR:
hsp01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
118101376 (ptprz1b)
Proteoglycans [BR:
hsp00535
]
Cell surface proteoglycans
Others
118101376 (ptprz1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
DSPc
Y_phosphatase3
Pur_ac_phosph_N
PTP-NADK
PTPlike_phytase
GUN4_N
Adeno_PIX
KRAB
Motif
Other DBs
NCBI-GeneID:
118101376
NCBI-ProteinID:
XP_047194445
LinkDB
All DBs
Position
22:complement(4887410..4952259)
Genome browser
AA seq
1443 aa
AA seq
DB search
METTLARSDAIVSQLLLFCHIVVAVEPLVRGLKKLPEDIDWSYSGTLNQHSWGKKYPSCN
SGRQSPVDIDETFTQVRLQYQNLQLEGWDQLTAESSTIHNNGKTVAIDVEGEFFVSGGGL
NSRLRVSRITFHWGRCNATSDGSEHSLNGMKYPLEMQIYCYDPDDFLSLDDAIREGGRVS
ALAVLFEISLEDNENFNPVIDAINTVSRFGKSGSLEAFTLRSLMPNNTDKYYIYNGSLTA
PPCSEMVEWVVFKQTVAISEKQLEMFCEVMTMEQAGYVMLTDYLQNNFREQQQQFMGQVF
ASYTGVEDVLTPTCSLEPENIQADAQNDTTIVVTWERPRVVYDTTIDWYTVTYQRLQGRD
QSKQEYRTDGDQDVGAIISSLLANSSYVVQVVAVCTNGLRGRWSDQIIVDMPLEDPENDS
DPDTVTKDVGVNKEVSSKAKWGKPENQNQVDLPLEDHSPVEEVPAEQTRVYQNHPTRLQD
QPTDQTQANQNVAVQVNPRPTPKTPSDSVVLQKTRLNQSAKKKPDQNRSTPDDMDQNWID
EDTMTPTQRTFTNAGFDGNGAIWITEATEQPGFLFPVARITTLPTIHRQITEEASLSVVP
NQSKDQAPPEQAGESELPSPQSDLYTPPVEEIQVTDVFYEDTVNNFPLESSASAATESSA
AAAVPGIKVDGVSPVFSAEDSDAPVNKPLLETVTSASSSSPSSPWITARTATGSNTLADS
VYKSLTTSSLLRVLMHTTQPMFNEGSNSSHESRVGLVGGVEREKRTVVPLAVVSTLTIIC
LMVLVGILIYWRNCFQAANFYPDDSASPKVISAPSTPLLLATDGHEPLTVKQFVKHVMEL
HTNNTFFKEFEIVKESYEEVQACTVDMGITTDSSNHPDNKSKNRYINILAYDHSRVKLSN
SLDKDGKCGDYINANFVDGYERTRAYVAAQGPLRAGREDFWRMIWQQNIGVIVMITNLKE
KGRTKCDQYWPDENQEEYGPYQVTLKSSKTLAYYTLRTFTVRDTANKASQRVEHTVMHYH
YTQWPDMGVPEYTLPVLSFIRASSRARTQEMGPVLVHCSAGVGRTGTYIVIDSMLQQIQD
QGTVNVLGFLKHVRTQRNFLVQTEEQYVFIHDALVEAILSRDTSVTSDLLHTYVSDLLTP
GLSGRTRMDKQFKLISQRQAKHADYSTALKDGNAEKNRARALMPVERSRVCLTASETNTT
GFINASYVMGHHHSKEFIVSQTPLSSTVADFWRMIWEHNTHTVVRLPDAHCQSQEGGGCV
YWPGKDQPMSFEGFIVSQSGEEHVSLSNDERLLMQDFMLESTQNNYVLEVRQYSAPCWPN
PDSPIRNSFDLVNAVREHSRHTDRPTVIHDPLGGATSGLFCALSTLSSQLEEEGAVDVYQ
VARMTNLMRPGVFNDVEQYQYLYHAVLSLVSSQEDQRALQSPETNGSVPLGQTNIAESLE
SLM
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggagacgacactggccaggagcgacgcgatcgtttcccagctgctgctgttctgccac
atcgttgtggcagtggagccactggtccgaggcctgaagaaactcccagaagatattgac
tggtcgtactcaggtaccctgaaccagcacagctggggtaagaagtacccgtcctgcaac
agcgggcggcagtctcctgtggacatcgatgaaaccttcacccaggtcaggctgcagtac
cagaacctacagctcgagggctgggaccaactgacggcagagtccagcaccatccacaac
aatgggaagactgtggccattgatgtggagggggagttctttgtgagcggaggagggttg
aactccaggcttcgtgtcagtagaatcacgttccactgggggcgctgcaacgcaacgtca
gatgggtctgaacacagcctgaatgggatgaaataccctctggagatgcaaatctactgt
tacgatccggatgactttctaagtctggatgatgctataagggaaggagggagggtctct
gctttggctgtgctctttgagatcagcctggaagacaatgagaacttcaatcctgtgata
gatgccatcaacactgtcagcaggtttggtaaaagcggctcgttggaagccttcaccctg
cgctccctaatgcctaataacaccgataaatattacatctacaacggctccctgactgct
cctccctgctctgagatggtggaatgggttgtgttcaaacagactgtggccatatcagaa
aaacagttggagatgttttgcgaggtgatgaccatggagcaggccggatacgtgatgctg
accgattacctgcagaacaacttcagagagcagcagcagcagttcatgggtcaggtgttc
gcctcgtacaccggagtggaggacgtgctcacacccacctgcagcttagagccggagaac
attcaggccgatgctcagaacgacaccaccatcgtggtgacgtgggagcgccctcgcgtg
gtttacgacacgaccatcgactggtacaccgtcacgtaccagaggctgcagggccgagac
caaagcaagcaggagtacaggacagacggggaccaggatgtgggcgccatcatctcaagc
ctgctggccaacagcagctatgtggtacaggtggtggctgtttgcaccaatggactcaga
ggacgatggagcgaccagatcatcgtggacatgcctttagaagaccccgaaaatgattcg
gaccccgacactgtcactaaagatgtgggagtcaacaaggaggtctcatctaaagccaag
tgggggaaacctgagaaccaaaaccaggtggatttgcccctagaggaccacagccctgtg
gaggaggtcccagcggagcagaccagagtttaccagaaccatcccacacgcctccaggac
cagccgacagaccaaacccaagccaaccagaacgtcgcggtgcaggtcaacccacgccca
acccccaagactccctctgattctgtggttctgcagaaaactcgactgaaccagagtgcg
aaaaagaaaccggatcaaaacaggtctacaccggatgatatggatcagaactggatcgac
gaggacaccatgactccaacacagcggactttcactaatgcaggttttgacggcaacggt
gctatctggataaccgaggcaacggagcagcctggcttcctgtttccagttgctcgaatc
acgacgctgccgacgatccaccgacaaatcacagaagaggcttcactgtcagtggtccca
aatcagtcaaaggatcaggctccaccagaacaagctggtgaaagtgagctcccttctccg
cagtcggacctctacacccctcctgtggaggaaatccaagtcacagatgtcttctatgaa
gacacagtcaacaactttcccctggaaagctccgcctccgctgcaacagagtcctctgct
gctgctgcggtgccaggtattaaagtggacggagtctccccagtgttctccgctgaggac
agcgacgctcccgtgaacaaaccactcctggaaaccgtcacttctgcctcctcttcctcc
ccgtcctccccctggatcacggcaaggacggcgaccggcagcaacaccctcgccgactca
gtctacaaatcactcaccacctcctctctgctcagggtgctgatgcatacgacccagccc
atgttcaacgagggcagcaacagcagccatgagtctcgggtggggctggtcggaggtgtg
gagagggagaagaggacagtcgttcctctcgctgtcgtctccactctcaccatcatctgt
ctgatggtcctggtgggcatactcatctactggagaaactgtttccaggcagcgaacttc
tacccagacgacagcgcctcacctaaagtcatatccgctccgtctacccccctgctgctg
gctacagacggtcatgagccgctgacggtgaagcagtttgtgaagcatgtcatggagctc
cacaccaacaacaccttcttcaaggagtttgagattgtcaaagaatcctacgaggaggta
caagcctgcacagtggacatgggcatcaccaccgacagctccaaccaccccgacaacaaa
agcaagaaccgatacatcaacattctggcctatgaccacagcagagtgaagctgtccaac
agtttggacaaagacgggaaatgcggggactacatcaacgctaactttgttgatggttac
gagcgaacgagagcgtacgtggcagcgcaggggcccctcagagcgggcagggaagacttc
tggaggatgatctggcagcagaatatcggagtgatcgtcatgatcaccaacctcaaggag
aaaggacggacaaaatgtgaccagtattggccggacgagaaccaggaggagtatggtccg
taccaggtgaccttgaaaagcagcaagaccctggcgtactacacactgcggaccttcacc
gtcagggataccgcaaataaggcgtcccagagagtcgaacacacagtcatgcactaccac
tacacccagtggccagacatgggcgtcccagaatacactctgcctgtcctgtccttcatc
agagcatcgtcccgggcccgcacacaagagatgggccctgttctggtgcactgcagtgcc
ggtgtaggaagaacaggaacctacattgtgatagacagcatgctgcagcagatccaggat
caggggacagtgaacgttcttggtttcctgaagcatgtgcggactcagaggaacttcctg
gttcagacagaggagcagtatgtatttatccatgatgccctggtggaggccatcttgagc
cgggacacctcagtgacgtcagacctcctccacacctacgtgtctgacctcctgacccct
gggctgtcaggcaggacgcgcatggacaaacagttcaaattgatcagtcagcgtcaggcg
aagcacgcagactacagcactgccctgaaagacggcaacgctgagaagaacagagccaga
gctctgatgcctgtggagagatcaagagtgtgtctgactgcctccgaaacaaacaccacc
ggcttcatcaacgcctcctacgtcatgggacatcaccacagtaaagagttcatagtgagc
cagactcctctgagcagcacggtggcggatttctggagaatgatctgggaacacaacaca
cacactgttgttcgcctgccggacgcacactgtcagagtcaagagggggggggctgtgtc
tactggcccggcaaagaccaaccaatgagctttgagggtttcattgtttcgcaatcgggg
gaggagcatgtctctctgtccaatgatgagagacttttgatgcaagatttcatgttggag
tctacacagaacaattatgtgctggaggtgcgacagtacagcgccccctgctggccgaac
ccagacagtcccatcaggaacagttttgatctggtcaacgcggtcagggagcacagccga
cacactgacaggcccaccgtcatacatgatccgttgggaggtgctacatcagggctgttc
tgtgctctcagcaccctgtccagtcagctggaggaggagggagctgtagacgtctaccag
gtggcacggatgaccaatctcatgaggcctggggtattcaatgatgtagagcagtaccag
tatctgtaccatgcggtgctgagtctggtgagcagccaagaggaccagagagccctgcag
agtccagagaccaacggatctgtaccactgggacagaccaacatcgcagagagcctggag
tcactcatgtag
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integrated database retrieval system
