Hippoglossus stenolepis (Pacific halibut): 118101386
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Entry
118101386 CDS
T08308
Symbol
cald1a
Name
(RefSeq) caldesmon 1a isoform X1
KO
K12327
caldesmon
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
118101386 (cald1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118101386 (cald1a)
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
118101386 (cald1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
118101386
NCBI-ProteinID:
XP_035002988
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Position
22:complement(8395524..8448862)
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AA seq
599 aa
AA seq
DB search
MEEMDFEQRRELRRQKREEMRLEAERLAKNDDDEEEAARERRRRARQDRLKTRDGEEPSG
QPDSLVMTNSHSGTETVSVSSSYGGGGDDEDQALLDRMAKREERRQRRMKEALERQRQGD
PAETEDNGSVAMEKNNDEEERPSSCRRGRYRDNNEEEEEKTFAYSSRREEKQREEPREEE
EAAPGDGEEADEGVDEEEEQEVEVVEDKPRRSYLREQESAEEPKTLNKEHTEEETHSLVS
EASNQAMSANSEAEEDAVESGEEEEENERGGAREEREEQRKQNGGLHEDEAPKQHRKPER
TLSRGSVRSPEVSVVDDEQDDDNARLEAERKLEELKRRRDDAESEEFERMRQKQQEAEVE
LEELKRKREDRRKVLDEEEKQKKQEEEERKDREEDEKRKMKEEIERRRAEAAEKRQKVED
VVDGEDKPFKCVSPRGSSLKIGERAEFLNKSAQKSSTVKAAHSPVVSKIDNRLEQYTSAA
QRENKESRSPRSGAVDLPMVTDSIRNIKSMWERGSVFSSPGGGGNTFKEAAVMKTGVAGR
INDWLNKTPESGKTSGGRPADLKPVDVTNKRSLWENKGASPTKVAGRGETKSVANGMGH
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatggactttgagcagcgccgggagctgaggaggcagaagcgggaggagatg
cgcctggaggccgaaaggttggcgaagaatgatgatgacgaagaagaggcggcccgtgag
agaaggcgcagggcacgccaggataggctgaagaccagggacggcgaggagcccagtgga
cagccagacagtctggtcatgaccaatagccacagtgggacagagacagtgtctgtgagc
agctcttatggaggcggtggagatgacgaggaccaagccctgctggaccgcatggccaaa
cgcgaggagagacggcagaggcgcatgaaagaggcgctggagagacagaggcagggggac
cccgctgagacagaggacaacggcagcgtcgccatggagaaaaacaatgatgaggaggag
aggccctcatcctgtcgtaggggtcgttaccgtgataataatgaggaggaagaggagaag
acgttcgcgtacagctccaggagagaggagaagcagcgagaagagccaagagaggaagag
gaggctgctcctggggacggagaagaagcagatgagggtgtggatgaagaggaggagcag
gaagtggaagtggtggaggacaaaccgagaaggtcttacctgagggaacaggaatcagct
gaagagcctaaaactctaaacaaggaacacactgaagaagaaacgcattcattagtcagt
gaggcttcaaatcaggccatgtcagcaaattcagaggctgaggaggatgcagtagaatca
ggcgaggaagaagaggagaatgagaggggcggggccagggaggagagggaggagcaaagg
aagcagaacggagggctgcacgaggacgaggctcccaaacaacacaggaaacccgagagg
accctgagtcgcggaagtgtacgctcccctgaggtgtccgtggttgacgacgagcaggac
gacgacaacgctcgcctggaagcggagcgcaagctggaggagctgaagcgtcgccgcgat
gatgcagagagcgaggagttcgagaggatgaggcagaagcagcaggaggccgaagttgag
ctggaggagctgaagaggaagagggaggacagaaggaaggtgctggatgaggaagagaag
cagaagaagcaggaggaggaagagaggaaagaccgagaggaggatgagaagaggaagatg
aaggaggagattgaaaggaggagagcagaggcggccgagaagagacagaaggtggaggac
gttgtggacggcgaggataaaccctttaagtgtgtcagcccccgaggctcctccctgaag
atcggagagagggcagagttcctgaacaagtcggcacagaaaagcagcacagtgaaggca
gctcattctcctgtggtgtccaagatagacaacagactggagcagtacacctcagctgct
cagagagagaacaaggagtctcgatcccctcgctccggagcggtggatctgcccatggtc
actgacagcatacgaaacatcaagagcatgtgggagagaggcagcgtgttcagctcaccc
gggggcggcgggaacacgttcaaggaagcagctgtgatgaagacaggcgtggcgggccgc
atcaacgactggctgaataaaacccctgagagcggcaaaacatcaggaggaaggccagcg
gacctgaagcctgtggatgtcaccaacaagaggagtctatgggaaaataaaggtgcctct
ccaaccaaggtggcaggcagaggggagaccaaatcagttgccaacgggatggggcactaa
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