Hippoglossus stenolepis (Pacific halibut): 118101436
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Entry
118101436 CDS
T08308
Symbol
dcn
Name
(RefSeq) decorin
KO
K04660
decorin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04350
TGF-beta signaling pathway
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118101436 (dcn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118101436 (dcn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hsp00535
]
118101436 (dcn)
Proteoglycans [BR:
hsp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
118101436 (dcn)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_9
LRR_14
LRR_LRWD1
LRR_NXF1-5
Birna_VP5
Motif
Other DBs
NCBI-GeneID:
118101436
NCBI-ProteinID:
XP_035003098
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Position
22:13625473..13642906
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AA seq
359 aa
AA seq
DB search
MRSACLSLLLVTACWALPFRQSGFLDFMMEDEAGSGDIPVVRTPPMPEGPKCPFRCQCHL
RVIQCSDLGLKSVPGDIPDDTTLLDLQNNKITEIKENDFKNLKGLHALILVNNKITVIHA
KALSPLTKLQRLYLSKNMLKDVPANMPKSLQELRIHENAITKIKKSSFQGMSHMIVMELG
SNPLKSAGIEASAFSDLKRVSYIRIADTDITDIPKGLPSSLSELHLDGNKISKVSADSFK
GLKNLAKLGLSYNEISSVENSTLVNVPHLRELHLDNNVLTSVPPGLPDHKYIQVVYLHVN
KIAAVGTEDFCPPGFNTKKAMYSGISLFSNPVPYWEVQPITFRCVFDRSAIQLGNYRKK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcggcctgtctctctctgctcctcgtcaccgcctgctgggctctgcccttccgc
caatctggcttcctagacttcatgatggaggatgaggcgggatcaggtgatataccggtt
gtcagaaccccccccatgcccgagggacccaagtgccccttcagatgccagtgccacctc
cgtgtgatccagtgctctgacctcggtctgaagtccgttcctggggacatccccgacgac
actaccctgctggacctgcagaacaacaagatcactgagatcaaggagaacgacttcaag
aacctcaaagggctgcacgctctgattctggtgaacaacaaaatcacagtgatccatgcc
aaggccctgagtcctctgaccaagctgcagcgcctctacctgtccaagaacatgctgaag
gacgtccccgccaacatgcccaagagcctgcaggagctccgcatccacgagaacgccatc
accaagatcaagaagtcctccttccagggcatgtcccacatgatcgtcatggagctcggc
tccaaccctctgaagagcgctggaatcgaggccagtgctttctctgacctgaaaagagtc
tcttacattcgcatcgcagacacggacatcactgacatccccaaaggtcttcccagctct
ctctccgagctccacctggatggaaacaaaatcagcaaggtgtccgccgacagcttcaag
ggcctgaagaacctggctaaactgggtctgagctacaacgagatcagctctgtggagaac
agcaccctggttaacgtgccccacctgcgcgagctgcacctcgacaacaacgtcctgacc
agcgttccccccggcctgcccgaccacaagtacatccaggtggtctacctccatgtcaac
aagattgccgctgtgggaacagaggacttctgcccccccggcttcaacaccaagaaggcc
atgtactccggcatcagcctcttcagcaaccccgttccttactgggaagtccagccgatc
accttccgctgcgtcttcgaccgctccgccatccagctcggcaactacaggaagaagtag
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