Hippoglossus stenolepis (Pacific halibut): 118101458
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Entry
118101458 CDS
T08308
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118101458 (mkrn1)
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118101458 (mkrn1)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118101458 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf_CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-CCCH_PARP12
zf-CCCH_9
zf-RING_5
zf-C3HC4_4
zf-CCCH_RBM22
Motif
Other DBs
NCBI-GeneID:
118101458
NCBI-ProteinID:
XP_035003156
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All DBs
Position
22:2713746..2732249
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AA seq
448 aa
AA seq
DB search
MAEAAAAASTAASGVTGGWTKHVTCRYFMHGLCKEGENCRYSHDLTSSEPAAMICKFFQK
GNCVFGDRCRFEHCKPAKNEEPPTPQMLPLPSAGPSDPEPSEPTPGTGAQDWVNAAEFVP
GQPYCGRAEQVNGESSGPLIEEFDSDTAQDNKQLRKQLCPYAAVGECRYGINCAYLHGDV
CDMCGLQVLHPTDSNQRSEHTKACIEAHEKDMEISFAIQRSKDMMCGVCMEVVFEKANPS
ERRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEDKEDKQ
KLIQKYKDGMGYTDHFPYSGIIEDTHPYTKTKSCRYFDEGRGTCPFGSNCFYKHAFPDGR
LEEAQPQRRQTGSNSRNRSSRRTPLWDIFDERESTDSFDNEDEEMVTFELSEMLLMLLAA
GTDDEVTDSEDEWDLFHEELDDFYEIYL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagcagcagcgtccacggcggcgtcaggagtaacgggaggctggacc
aaacacgtaacctgcagatatttcatgcatggactctgcaaagagggagaaaactgccga
tattcccacgatctgaccagcagcgaacctgcagccatgatttgcaagttcttccagaag
ggaaactgtgtgtttggggaccgttgcaggtttgaacactgtaaaccggcaaaaaacgag
gagccaccaacaccgcagatgctgccgctgccctccgccggcccgtcagacccagaaccc
agtgagccaacacctggcacaggggcacaagactgggtcaacgctgctgagtttgttcca
ggacagccgtactgtggacgggctgagcaagtgaacggggagagctccggcccgctcatc
gaggagttcgacagcgacacggcacaggacaacaaacagctgaggaagcagctctgtccg
tacgccgccgtcggagagtgccgctacggaatcaactgtgcctatctccacggcgacgtc
tgtgatatgtgtggccttcaggtgctccaccccactgacagcaaccagcgctcagagcac
actaaggcgtgcatcgaggcccacgagaaagacatggagatttcgttcgccatccagcgc
agcaaggacatgatgtgcggtgtgtgtatggaggtggtgtttgagaaggccaacccaagc
gagcgccgttttggtatcctctccaactgcagccactgctactgtctaaagtgcattcgc
aagtggaggagtgccaagcagtttgagagcaaaatcatcaagtcttgcccagagtgtcga
atcacgtccaactttgtcatccccagtgagtactgggtggaagataaggaagacaagcag
aaactcatccagaaatacaaggacggcatggggtacacagaccattttccatactctggg
atcatagaggatacacatccatatactaagactaaatcgtgtcgatactttgacgagggc
cgcgggacatgccctttcggctcgaattgcttctacaagcacgccttccctgacgggcga
ctggaggaagctcaaccccagcgaagacagacgggctcgaacagcagaaaccggagctcg
aggcgaacaccgctgtgggacatctttgatgagagggaaagcaccgactccttcgacaac
gaggacgaggagatggtgacgttcgagctgagcgagatgctcctcatgctgctcgccgca
ggaaccgacgacgaggtgacagactcagaggacgaatgggacttgtttcacgaggagctg
gacgatttctatgaaatttacctatag
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