Hippoglossus stenolepis (Pacific halibut): 118101499
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Entry
118101499 CDS
T08308
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118101499
Membrane trafficking [BR:
hsp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118101499
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
118101499
NCBI-ProteinID:
XP_035003255
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Position
22:complement(15498648..15518950)
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AA seq
890 aa
AA seq
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MMMSDASDMLAAALEQMDGIIAGSKAMDYSNGLFDCQSPTSPFMGGLRVLHLLEDLRAAL
ELMDNEERDNLRCQIPDSTAEGLAEWLHGGMANGLGADALNQDRLSRLESDKECLILQVS
VLTDQVEVQGEKIRDLDSCLDHHREKLNATEELLQLELLNRSALETQKLELMTEVSSLKL
KLTTVERDHRDHEGLYQEVTDLRFRVTDMENERLQCEKKLKVTKDELQLLQKQLDERELE
LRRLRDEGRLKVEGGDGDTEMLKVRRVLETLTSANDQKERRIKELEESLTKCKEVQELDK
EKSKEDDYDDIPDDPSVPVSMEVEQVTLALEGEAGRSFGESVPCIAVLSEMNELDRERQL
QTQSSTVTSSSDQTINRAAAGSLPPSKSNTSSEQAFGSKKSRSSFGRGFLKLRGGKQAAS
TSNLDRSRSSSAPVLAETERKGTDHLDLAGVPPQKSHNAPPLASSPETKKKSKGFMKFFG
RLKRSHSTSFNLDDAAEMEFRRGGVRATAGPRLGWSREAKHNAVDVPFSRWSKEEVYEWL
HEQGLGLYAAQGQNWIKSGQTLLQASQHDVEKELGIRQPLHRKKLQLALQALGSDEDDLK
GKLDHNWVTRWLDDIGLPQYKSHFDEARVDGRMLDHMTVEDLLSLKVGSVLHHLGIKRAI
QVLRLNSYEANCLRRRPSDENNMTPAEISQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGG
LMVLEPRFNVEALALLLNIPPNKTLLRRHLATHFHLLVGSEAQRLKQDCLENPDYTVLSA
TAKVKPRRMSFGGFGTLRRKRQDDNEEYVCPMNVEMPKSSSFQTGVRIYEDHLDHLEQME
DSEGTVRQIGAFSEGINNLTNMLKGDGFFQETSVCHPDVDAAETHDSSNA
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtccgatgccagtgacatgttggcagctgccctggagcagatggatgggatc
atagcaggctccaaggcgatggattactccaacgggctcttcgactgccagtcgcccacc
tcacctttcatggggggcctccgggtgctgcacctccttgaggacctgcgggcggcactg
gagctcatggacaacgaggagagggacaacctgcgctgtcagatccccgattccaccgca
gaggggttggcagagtggctgcacggagggatggccaacggactcggcgcagacgcactg
aaccaagatcgtctgtcgcggctggagagtgacaaagagtgtcttattctccaggtcagt
gttctgacagaccaggtggaggtgcagggcgaaaagattcgagaccttgactcttgtctt
gatcatcaccgggagaaactcaatgctactgaggagcttcttcaactggagctgctgaac
cgatcggcgctggagacccagaagctggagctgatgaccgaggtgtcaagtctgaagctg
aagctaacgactgtggagcgagaccacagggaccatgagggcctgtaccaggaagtaacg
gacctgcggttcagggtgactgacatggagaacgaacggctgcagtgtgagaagaaactc
aaagttaccaaagacgagctgcagcttctacagaagcagctggacgagcgagagctggag
ctgcggaggctgagggacgagggccggctgaaggtggagggaggagatggagatacagaa
atgttgaaggtgaggagggtgttggagacgctgacgtccgccaacgaccagaaggagaga
cggattaaagagctggaggagtcgctaactaagtgcaaggaagtgcaggagctcgataaa
gagaagtcgaaggaagacgactatgacgatatcccagatgatccctcggttcctgtgtcc
atggaggtggagcaggtcacgctggcgttggagggggaggcaggaaggagctttggcgag
tcagttccgtgtatcgctgtgttgtctgagatgaacgagctggacagagaacgacagtta
cagacgcaaagctcgaccgtgaccagcagcagtgaccagacgataaaccgagcagcagct
ggttccctcccccccagcaaatcaaacaccagcagtgaacaggcgtttggttccaagaag
agtcgctcctcttttggtcgaggattcctgaagctgcgaggagggaagcaggcggccagc
acctccaacctcgatcgcagccggagctccagtgcacctgtgttagctgagacggaacgt
aaaggcacagatcacctggacttggccggcgttcctccacagaaatcccacaatgcacct
cccctggcgtcctcaccagaaaccaaaaagaagtcgaaaggcttcatgaaattctttggc
aggctgaagaggagtcactccacctccttcaacctcgacgacgcagcggagatggagttc
aggaggggaggagtcagagccacagccggaccccgactcgggtggtcgcgagaagctaaa
cacaatgctgtcgatgttcctttctcccgctggagcaaagaggaagtttacgagtggctg
cacgaacaaggcctcgggttatacgctgctcagggtcagaactggatcaaatcagggcaa
acgctgctgcaggcgtcacagcacgacgtggagaaggagctgggcatcaggcagcctctc
cacaggaagaagctgcagctggctctacaggcgctcggctcagatgaggacgacctgaag
ggcaaactggaccacaactgggtgaccagatggctggatgacatcggcctcccgcagtac
aagagtcacttcgatgaggctcgtgttgacggacggatgctggaccacatgacagtggag
gacttgttgtctctgaaggtcggcagcgttctccatcacctcggcatcaaacgagccatt
caggtcctccgcctcaactcctacgaagcaaactgcctcaggcgacgaccgtccgacgag
aacaacatgactccggctgagatctcccagtggacgaaccaccgagtgatggagtggctc
cgatcggtggacctggccgagtacgctccgaacctgagaggcagcggcgttcatggagga
ctgatggtgctggagccgcgcttcaatgtggaagctctcgctctcctgctcaacatcccc
cccaacaaaaccctgctgagacgccacctggccacacacttccacctgctcgtcggctcg
gaggctcagcggctcaaacaggactgtctggaaaacccagactacaccgtcctcagcgcc
accgccaaggtcaagcctcgccggatgtcgttcggtgggtttggaactctgaggaggaaa
cgtcaggacgacaacgaggagtacgtctgccccatgaacgtggaaatgcccaaaagcagc
agcttccagacgggggtccggatctacgaggaccacctggaccacctggaacagatggaa
gactccgaggggacagtgcggcagatcggagcgttttccgagggaatcaacaacctgacg
aacatgctgaagggcgacgggttcttccaggaaacctccgtctgtcatccagacgtcgac
gcagcagaaacacacgacagctccaacgcgtga
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