Hippoglossus stenolepis (Pacific halibut): 118101501
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Entry
118101501 CDS
T08308
Symbol
ppfia2
Name
(RefSeq) liprin-alpha-2 isoform X1
KO
K26226
liprin-alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118101501 (ppfia2)
Membrane trafficking [BR:
hsp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118101501 (ppfia2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Crescentin
Motif
Other DBs
NCBI-GeneID:
118101501
NCBI-ProteinID:
XP_047194558
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All DBs
Position
22:15000723..15136899
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AA seq
1359 aa
AA seq
DB search
MMCEVMPTISEDTALSQRGSQSSSSDPDSHFEQLMVNMLDERDRLLDTLRETQESLGLSQ
QHLQDVVYDRDSLQRQLSSALPQEFAALTKELNACRENLLEKEEEISELKAERNNTRLLL
EHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVS
LERVSALEEELTAANQEIVALREQNAHIQRKVASGDGGDDLLEGSDAQQKVHSKRLSNGS
LESAHEASQVVELQDLLEKQNYELAQMKERMSSLSSRVSEVEQELETARKDLIKSEEMNI
KYQRDIKEAMCQKEDMEERIVTLEKRYLSAQRESTSVHDINDKLENELANKEAFLRQMEE
KNRQLQERLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEERMRHLECQ
LEEKNQELLRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVLIQD
SEGYRKQYEDSIHEKTHLAEEIEKLRSEIDQFRLRTGSLTDPTLSRSHLDTSTELRFSLG
SLAETQSDHYRSAKVIRRPRRGRLGLRETKAKSLGEHEWRSQQLGVLGGHHFESDTEMSD
IDDDDRETMFSSMDMLSPSGHSDAQTLAMMLQEQLDAINKEIRLIQEEKESTELRAEEIE
NRVASVSLEGLNLARMHQYGASITASATASSLASSSPPSGHSTPKLDPRSPARDMERMGV
MTLPSDLRKHRRKIAAVDEDGHEDKATIKCETSPPPTPRTVRMTHTLPASSHNDARGIVA
SLEAEASALSSVASSQDSLHKQPKKKGIKSSIGRLFGKKEKGRMAHMAHRHVMVDPHATM
MDPDMAGQDLGLGKLGTQAEKDRRMKKNGHELLEEARRKGLPFAQWDGPTVVAWLELWLG
MPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPPT
SRTASGNVWLTHEEMETMAAPSKTKSDSEEGSWAQTLAYGDMNHEWIGNEWLPSLGLPQY
RSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMGLKKLNYDRKELERRREH
SQHEMRDVLVWSNERVIRWVQSIGLRDYANILLESGVHGALVALDDNFDYTSLALLLQIP
NQNTQARQILEREYNNLLALGTDRRLDECDDKDFRGPSWRRQFPHRDVHGISMMPGSAET
LPAGFRLTTSAHSRRLPPEVLYEALDDSPDDMYLDWYQGQICPNEGSGLVRPVACIINIL
HIIPPPLMVSANHCPAVSLILFLVSHPHLSSLTRLLQSLFYPTPRVLSCRVAKKSCCLVP
PLVVKASESSYGLRPMLAAVTLEVTEIEQQNKRWLSGAM
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagcgaggacacggcgctgagccagcgcggctct
cagagcagctcctcggaccccgactcccacttcgagcagctgatggtcaacatgctggac
gagcgggaccggctgctggacacgctgagggaaacccaggagagcctcggactgtcccag
cagcatctgcaggacgtcgtctacgaccgcgactcgctgcagcgccagctcagctccgcc
ctgccacaggagtttgctgcgctgaccaaggagctgaacgcctgcagggagaacctgctg
gagaaggaggaggagatctctgagctcaaagcggagaggaacaacaccaggctcctgctg
gaacatctggaatgtctggtgtccagacacgagcggtcgcttcgcatgacggtggtcaag
cgtcaggctcagtctccctcgggagtttccagcgaggtcgaggtcctcaaagctctcaag
tccctgtttgaacaccacaaagccctcgatgagaaggtcagggagagactacgggtgtca
ctggagagggtgtccgccttggaggaggagcttacagcagccaatcaggagattgtggcc
ttacgggaacagaatgctcacatccagaggaaagtggcgtccggagacggaggagacgac
ctcctcgagggaagcgacgctcagcagaaagtccacagcaagcgcctgtccaacggctcc
ctggagtcggcccacgaggcgagtcaggtggtggagctgcaggacctgctggagaagcag
aactacgagctggcccagatgaaggagcgcatgtcctcgctctcctcgcgggtctccgag
gtggagcaggagctggagaccgcccgcaaggacctcatcaagtcggaggagatgaacatc
aagtaccagagggacatcaaagaggccatgtgtcaaaaggaggacatggaggagcggatc
gtcacgctggagaaacgctacctgagcgcccagcgcgagtcgacctcggtgcacgacatc
aacgacaaactggagaacgagttggccaacaaggaggcgttcctcagacagatggaggag
aagaaccggcagctccaggagaggttggagctggcggagcagaagctccagcagaccatg
aggaaggccgagacgctgccggaggtcgaggctgaactggcccagcggatagcggccctc
acaaaggcggaggagcgtcacgggagcatcgaggagcgcatgaggcacttggaatgccag
ctggaggagaagaaccaggagctgctgagggctcgacagagagagaagatgaacgaggag
cacaacaagcggctgtcggacacggtggaccgactcctcaccgagtccaacgagcggctg
cagcttcacctcaaggagaggatggcagctctggaggagaagaacgtgctgatccaggac
tctgaaggttacaggaaacagtacgaggactccatccacgaaaaaacgcatctggcagag
gagattgagaaactgagatcggagatcgaccagttcagactgaggacaggttccctcaca
gaccccaccctgtcaaggtctcatctggacacgtccaccgagcttcgattctctctggga
tctctggctgaaacccagtcggaccactaccgctcggccaaggtcatccgccggccgagg
agaggtcggctgggtctgcgtgaaaccaaggccaaatctctgggcgagcacgagtggcgc
tcacagcagctcggcgtcctgggcggtcaccacttcgagagcgacaccgagatgtcggac
atcgacgacgacgacagggaaacgatgttcagctccatggacatgctctcgcccagcggc
cactccgacgcacaaactctggccatgatgctgcaggagcagctggacgccatcaacaag
gagattcggctgatccaggaggagaaggagtccacggagctgcgggcggaggagatcgag
aaccgcgtggccagcgtcagcctggaggggctcaacctggcccgaatgcaccaatacgga
gcctccatcactgcctcggccactgcctcctccctggcctcctcctccccacccagcgga
cactccacccccaaactcgacccccggagtcctgctcgggacatggagcggatgggggtc
atgacactgcccagtgatctgaggaaacacaggagaaagattgcagcggtggacgaggac
ggccacgaggacaaggccaccatcaagtgtgagacatccccccctccaacgccacgcaca
gtccgaatgacacacacactgccagcctcctcgcacaatgacgcacgagggatcgtggcc
tccctggaggctgaggccagcgccctgagcagcgtcgccagcagccaagactccctccac
aagcagccgaagaagaagggcatcaagtcgtccatcgggcggctgttcggcaagaaggag
aaaggccgaatggctcacatggcacacagacatgtcatggtggatccacatgcaaccatg
atggacccggacatggccggccaggacctgggcctggggaagctggggactcaggccgag
aaggaccgcaggatgaaaaagaacggacacgagctattggaggaggccaggaggaagggt
ttacctttcgcccaatgggacggccccactgtcgtcgcctggctggagctgtggttgggg
atgccggcgtggtacgtggcggcgtgccgggccaacgtgaagagcggcgccatcatgtcg
gcgctctccgacaccgagatccagagggagatcggcatcagcaacccgctgcaccggctc
aaactccgcctggccatccaggaaatggtctccctcaccagcccctcagccccgcccact
tcgagaaccgcgtcaggcaatgtatggctgacccatgaggagatggagaccatggcagcc
ccttccaaaacgaaatcagactctgaggaggggagctgggcacagactctggcttatggc
gacatgaaccatgagtggatagggaacgagtggctgcccagtctcggactacctcagtac
cgcagctacttcatggagtgcctggtggacgcccgcatgctggaccacctcaccaagaag
gacctgagggtgcacctcaaaatggtggacagcttccacagaacaagtttacagtacgga
atcatgggtctgaagaagctcaactacgacaggaaggagctggagagacgccgggagcac
agccagcacgagatgagagacgtgctggtgtggagcaacgagcgagtgatccgctgggtg
cagagcatcggcctgagggactatgccaacatcctgctggagagcggcgtgcacggagcc
ctggtcgccctggacgacaactttgactacaccagcctggccctgctcctccagatcccc
aatcaaaacactcaggcacgtcagattctggagcgagagtacaataatctgttggccctg
ggcaccgaccggaggctggacgagtgtgacgacaaagatttccgcggtccctcgtggagg
cgacagttcccgcacagagacgtccacggtatcagtatgatgcccggatcagcggagacg
ctccctgctggcttccgtctcaccacgtctgctcattctcggaggctgccccctgaggtc
ctctatgaggcgctggacgacagtcctgacgacatgtatttggactggtatcaaggtcag
atatgtcccaatgaaggttccgggcttgttcgcccagttgcgtgtattattaatattcta
catataatccctcctcctctcatggtctctgccaaccactgtcctgctgtgtctttaatt
ctcttcctggtctctcaccctcatctttcttctcttacccgtctacttcaatctctcttc
tatccaactccaagggtgttgtcttgcagagttgctaaaaaaagttgttgtctagtccct
cccctggtggtgaaagctagtgagtcaagttatggattacgacccatgcttgctgctgta
acccttgaagttacagaaattgagcagcaaaacaaacggtggctgagcggcgctatgtaa
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