Hippoglossus stenolepis (Pacific halibut): 118101510
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Entry
118101510 CDS
T08308
Symbol
tnpo3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
hsp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118101510 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118101510 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118101510 (tnpo3)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
118101510 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
TOR1L1_N
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
118101510
NCBI-ProteinID:
XP_035003273
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All DBs
Position
22:18575916..18590395
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AA seq
923 aa
AA seq
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MEGGKPNLTLVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEISDQLLQCKQDVESC
YFAAQTMKMKIQTSFYELPPETHNALRDSLLTHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYNNDISSMPFLVEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTV
VTLLTSCVEKTGDNEKMLIKVFRCLGSWFNLGVLDTNFMANNQLLMVLFQVLQRDETSTN
LHEAASDCVCSSLYAIENVDTNMALALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKINDAA
LHTIFRPYIQRLLHCLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLSEVLQQVVLLPESVHMAVRYT
SIELVGEMSEVVDRNPRFLDPVLSYLMKGLREKPLASAAAKAIHNICSVCRDHMAQHFQG
LLDIARSLDSFALSTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVIALKKLLAEES
TNGKSADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSDTLNTHQADNRIVE
RCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFVQRSPVTLLSSSIIINIIQCA
IAASALDHRDANCSVMKFVRDLIHTGVANDHEEDFEVRKQLIGQAMEQHGQQLVTQLMHS
CCFCLPPYTLPDVAEVLWEVMAFDRPTLCRWLENALKGLPKETSGGAVTVTHKQLTDFHK
QVTSAEECKHVCWAIREFTRLFR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaggggggcaaaccgaacctgaccctggtctaccaggcggtccaagccctgtaccac
gacccggacccggccgggaaggagcgagcctcggtgtggctcggagagctccaaagatcg
atgtacgcctgggagatctcagaccagctgctgcagtgcaaacaggacgtggaatcgtgt
tattttgctgctcagacgatgaagatgaagatccagacatccttctacgagcttcctcct
gagacccacaatgcacttcgagactcgctgctgacccacatccagaacctcaaagatctg
tcgcccatcattgtcacacagctggctttagcgatcgcagatctcgctcttcagatggcg
tcttggaaaggatgcgttcacacgctcatagaaaagtacaataatgacatcagctcgatg
cccttcctggtggagatcctcactgtgcttccagaggaagttcacagtcgatctctacga
atcggagccaatcgtaggacagagatcatcgaggatctggcttattactccagcactgtg
gtcaccctgctgacgtcatgtgtggagaagacgggcgacaatgagaagatgctcatcaaa
gtgtttcgttgtctcggcagctggttcaacctgggagtgctcgacactaacttcatggct
aataaccagttgctcatggttctcttccaagtcctgcagagggatgaaacctccactaac
ctccatgaggcagcgtcggactgtgtctgctcgtctctctacgccatagaaaatgtggac
accaacatggcgttggctctgcagctcttccagggcgtcctgaccttggagacggcctat
cacatggctgtagcccgagaagaccttgacaaagtgctgaactactgcaggatcttcacc
gaactctgtgagacgtttctagagacgactgtcaggagtccaggtcagggtatgggcgac
ctgaggacactggagctgctgctgatctgtgcaggacacccacagtacgaggtggtggag
atttcctttaacttctggtaccgtctcggagaacatctgtataaaattaatgatgcggcg
cttcacaccatcttcagaccgtacatccagagacttctgcactgtttggctcgacactgt
cagctggatccagaccacgagggaatcccggaggacacagatgattttggagagttcagg
atgagagtctctgacctcgttaaagacgtaatttttcttgtcgggtccatggagtgtttt
tctcagttatattctacgttaaaagaggggaacccaccctgggaagtgacggaagctgtt
cttttcatcatggctgcgattgcgaaaagtgttgatccagaaaacaaccctacgctgtcg
gaggtgctgcagcaggtggttttacttcctgaaagtgtccacatggcagttcgatacacg
agcattgagctggttggagagatgagcgaggtcgtagacagaaacccaagattcctggac
cccgtgttgagttacctgatgaaaggcctcagagagaaacctctggcgtcagcggcggcg
aaggcgatccacaacatctgttcagtgtgcagagatcacatggctcaacacttccagggt
ctgctcgacatcgctcgctccctcgactcattcgccctgtccacagaggcagccgtagga
ctgctcaaaggtacagctctggtcctggctcgtcttcctctagagaagattgcagagtgt
ctcagtgacctttgtgcggttcaagtcatcgctctgaagaagcttttagcagaagaatct
acaaacggtaaatcagctgatccgactgtttggctcgaccgactggctgttatcttcaga
cacacaaaccccatcgtagagaatggacagactcacccctgtcagaaagtcatccaggag
atctggccggtgctgtcggacactctgaacactcatcaggctgataacagaatcgtggag
cgatgctgtcgctgtctcaggtttgctgtcagatgtgttgggaaaggttccgcctccctg
ctacagccactcgtcactcagatggtgagtgtgtaccaggtgtatccacactcctgcttc
ctgtacctgggcagcatcttggtggatgagtacggcatggaggagggctgcaggcaggga
ctgctcgacatgttacaggctctgtgtatgccgaccttccagctgctggaacagcccaac
ggtctaaggaatcatcctgacaccgtggacgacctgttcagactagccaccaggtttgtt
cagcggagtccagtcacgttactcagcagcagcatcatcattaacatcatccagtgtgcg
attgctgccagcgcattagaccatcgagacgccaactgcagcgtcatgaagtttgtccga
gatctgattcacaccggagtcgccaacgaccacgaggaggactttgaggtgcggaagcag
ctgattggtcaggccatggagcaacatggtcagcagctagtcactcagctcatgcactcg
tgttgtttctgtctgccgccgtacacgcttcctgacgtggccgaggttctgtgggaggtc
atggcgtttgacagacctacgctctgtcgctggttagaaaacgctctgaaaggtttacca
aaggagacttcaggaggcgccgtgacagtcacacacaaacagctgactgacttccacaaa
caggtcaccagtgctgaggagtgtaaacacgtgtgttgggccatcagagagttcaccaga
ctgttccgatag
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