Hippoglossus stenolepis (Pacific halibut): 118101595
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Entry
118101595 CDS
T08308
Symbol
shank3b
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SH3_2
Ank_4
Ank_3
SAM_2
Ank_5
PDZ_6
PDZ
SH3_9
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
118101595
NCBI-ProteinID:
XP_047194557
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All DBs
Position
22:17774997..17800717
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AA seq
1724 aa
AA seq
DB search
MPLSPAADTKHDRPRQQAVTNGNPTGSAVARDDDADDTSPGNSTVVRIGIPDLQQTKCLR
LDPELPVWTSKQRVLVTLTQSLSDVLNYGLFQPAFNGRAGKFLDEERLLKEYPLPPITPI
PYLEFRYKRRIYTQTYVDDKQLAKLHTKANLKRFMEHVAQKNVEKLSKWLEKGLDPNFHD
ADTGECPLTLAVQLEESCELIKALRSGGAHLDFRTRDGITALHRAVLCRNSAALTTLLDL
GASPDYKDSRGLTPLYHSAMVGGAPYCCELLLQDHATIGMTDENGWQEIHQACRYGNVQH
LEHLLFYGADMSSQNASGNTALHLCALYNQDSCARVLLFRGANKDIKNYNNQTAFQVAII
AGNFDLAEIIKIHKTSDVVPFRETPSYTKRRRGGSRTSAGNGLSSPRSLIRSASDNALES
PASSPGPSLQSLETHHDTHTHSLRRHTRRLSPSAGGHVEASPPPSLPAPQMRKRRLYSAV
PGRTFIATRSHVPQGPGEIQLHRGERVKVLSIGEGGYWEGSVKGRTGWFPADCVEEVQMR
QYDPRLETREDRTKRLFRHYTVGSYDNYTSYSDYVIEEKAAVLQKRESEGFGFVLRGAKA
ETPIEEFAPTPAFPALQYLESVDQGGVAWRAGLRTGDFLIEVNGTDVVKVGHRQVVSLIR
QGGSRLLMKVVSVSRKSESNLIRKKAPPPPKRAPSTSLTLRSKSMTADLEDIEKLDEMLA
SGQPEVVLRPRPADDFRAATVKQRPTSRRITQAEINSLFERQGLVPPSAPEKSTMALPRG
MSRTKSFGTPEDDRISALINESRFPRSSSLTDSFIPPPPQTAPPPPPAASATSPLFLLDS
GPPPSFLPPPPPARGEGLTRSSFKPGAEPRLQELSDSPSRSHSHAERQRKARSMIILQDT
PPSLQPDAQAVAPPHALHTATHTLHTATHTSTLSLHSTSPALGHSPLSRRRGRPIENPYA
NVGQQAPPTKPQRRKSPLLKQLPVEEMGLGIRDYDLSKLDGGGPGSPSRAEMYQQQVLSE
RARVQGRRSSLFLSVEGAGSENQVPPLLTLSHSMDDLGELPPPAPVLSPSPTPHTFLHPL
TGKPLDPSSPLALALAARERALTARTPSPEPRSKHASASTTPIPTPAASPEGRHKRTPIA
TPQSSPEPRSKRTTPQTSPEQRTKRTTPQTSPELRHKRITPPLFPDGQVERPETEGGVTS
PAGPSPERWRPTPLPPLASESHSALIDRRRSLTVGSSEEEGGAYTVTLPPALLSSSDEET
REELRRIGLVTPPPAFGCPTAPPPPSSLTLLPRRVGEGGGEGGPDSLGRRGDEEEGSDER
LHDSSSPSSLPPSITLASPPAPASPSSPPATHQSSSSAVTSPSGLKPRLRSPIGRGRSAL
RDPLLKQSSDSELLPYTASSSPSSPLCSSPTGGGGRQPRYLFQRRSKLWGGGDDRGEERR
GLSPEEGGGRPAALGGQGLGSAVDLTSRSASALELSGRAGSGLDLVNRLQLLNKDSHSLG
EEPSPLDPGRRSPVGGARCVDRGESKSLFSSLGELHTISQRGYGASYTVRPGSRYPVTRR
SPSPSPSPSDRSIGLASSPTPCSERPDLSSGRGLTILKSSSLSLPSEPKEVRFVMRSASA
RTRSRSPSPSPHASPCPSPVLSGPLLALRPWRQRPLNLWNKYDVGDWLESVGLAEHRQRF
QEHEIEGSHLPALTKEDYVELGVTRLGHRINIERALRQLLDGST
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgagtccggctgctgacaccaaacatgatcgcccgcggcaacaggcggttact
aacggcaacccgacaggctctgctgttgccagggacgacgacgcggatgacacgtcccct
ggaaacagcactgtcgtccgcattggcatcccggacctgcagcagacgaagtgtttgcgg
ttggacccagagttaccagtttggaccagtaagcagagggttctggtgacgttgactcag
tctctgtcggatgttttgaactatggtctcttccagccggcgttcaacggccgagccgga
aagtttctggacgaggagcggctgctgaaggagtaccctctgccccccatcacccccatc
ccctacctggagtttcgttataagaggagaatttacactcagacctacgtggacgataaa
cagctggccaagttacacaccaaggccaatctgaagcgtttcatggaacatgttgctcag
aagaacgtggagaaactttccaaatggctggaaaagggcctggacccaaacttccacgac
gccgacacgggggagtgccccctgacgctggccgtgcagctggaggagagttgcgagctg
attaaagctcttcgcagcggtggagctcatctggacttcaggaccagggacggtatcacc
gctctgcaccgagccgtcctctgcaggaacagcgccgctctcactacgctgctcgacctc
ggtgcgtctccggactacaaggacagcagaggtctcactcctctctaccactctgccatg
gtggggggcgccccctactgctgcgagctgctactgcaggaccatgccaccattgggatg
actgatgagaacgggtggcaggaaatccaccaggcatgtcgctatggtaacgtgcagcac
ttggagcacctgctgttctatggcgctgacatgagttcccagaatgcatcaggaaacacc
gcactgcatctctgtgcgctctacaaccaggacagttgtgcccgagtgctgctgttcaga
ggagcaaacaaggacatcaagaactacaacaaccagacggcctttcaggtggcgatcatt
gctgggaactttgatttggcagaaatcattaaaatccacaaaacctctgatgttgtaccc
ttcagagaaactccctcctacaccaaacgccgccgcggtgggagcaggacgtcggcggga
aacggtctctcatctccacgttctctgattcgctcagccagtgacaatgctcttgaaagc
cccgcctcctctcctggcccctccctccaaagcctggagactcaccacgacacgcacaca
cactcgctacgacgtcacacacggcgactcagcccgagcgccggaggtcatgtggaggcc
agtcccccgccctccctccccgccccccagatgaggaagaggaggctgtacagcgccgta
ccgggacgcaccttcatcgccacccggtcccacgtcccccaggggcctggcgagatccaa
ctgcaccgaggagagagggtgaaagttctgtctataggtgagggggggtactgggaaggc
agcgttaaaggaagaactggttggtttcctgctgactgtgttgaagaagtacagatgaga
caatacgaccccagactggagacgagggaggatcgcaccaagagactgttcagacattat
actgtaggatcctacgacaactacacctcctacagcgactacgtgatcgaggagaaggcg
gccgtgctgcagaagagagagagcgagggattcggcttcgtcctcagaggagctaaagct
gagacccccatcgaggagttcgccccgacgccggcgtttcctgctcttcagtacctggag
tcagtcgaccaggggggcgtggcttggagggcggggctacggactggagactttctcata
gaggtgaacgggacggacgtggtgaaggtgggtcaccggcaggtcgtctctctgatccga
cagggaggaagtcgcctgctgatgaaagtcgtgtctgtttccaggaaatcagaatccaac
ctcatcaggaagaaagctccaccccctccaaaacgagcccccagcacctcgctaacgctc
cgatccaagtccatgaccgctgacctggaggacatcgagaaactggatgagatgttggcc
agcggtcaacccgaagtcgtcctgaggccacgacctgcggacgacttcagagcggcgacg
gtcaaacagcgaccgaccagccgacggatcacacaggctgagattaattctctgtttgag
cgtcagggtctggttcccccctcagccccagagaagagcaccatggctttacccagagga
atgtccagaaccaagagctttggcacacctgaggacgacaggatctcagccctgatcaac
gagagtcggtttccacggagctcctcgctgacggacagcttcatccctccccctcctcag
actgctcctccccctcctcccgccgcctccgccacctccccgctcttcctcctcgactct
ggacctcccccctccttcctcccccctcctccccctgcccggggggaggggctgacccgc
tccagcttcaagccaggggcggagccgaggctgcaggagctctctgactctccgtcgaga
agccactcccacgccgagcgtcagaggaaagcgaggtcgatgatcatcctgcaggacacg
cccccgtcgctgcagcctgatgcacaagccgtcgcccccccgcacgcgctgcacactgcc
acacacacgcttcacaccgccacacacacctccacgctctctctccacagcaccagccct
gccctcggccactcaccgctgtcacgccgcaggggtcgaccaatagaaaacccttatgct
aacgtgggacagcaggctccacccaccaaaccgcagaggaggaagtcacctttgctgaaa
caacttcctgtagaggagatgggacttgggatcagagattatgatttgtccaaattagac
ggaggagggcctggcagccccagcagggcggagatgtaccagcagcaggttctttcagag
cgcgctcgggtacaaggccgccggtcgtctctcttcctgtctgttgagggcgcggggtct
gaaaaccaggtgccacccctgctgactttgagccattcgatggacgacctcggtgagctt
cctcctcccgccccggttctatcgccttccccgacacctcacaccttcctccacccgcta
acgggaaaacctctcgacccgtcctccccactcgccctggctcttgcggcacgagaacga
gcgctcactgccagaacgccgagtcctgagcctcgatctaaacacgcatctgcctccacg
acacccatccccaccccagccgcaagcccagagggcagacataagcgcacccctatcgcc
acccctcagagcagccctgagccccgatccaaacgcacaactccacagacgagcccagag
cagcgaaccaagcgcaccactcctcaaaccagcccagagctgaggcataaacgcataacc
ccgcctctgttccctgatggacaggtagaacgtccagagacagagggaggagtaacatca
cctgctggcccatctcctgaacgttggagacccacccccttgccaccactggccagtgag
agtcactcagctctgattgacaggcgcagaagccttacagtgggcagctcagaggaggag
ggtggggcttacacagtgacactcccaccagcattgttgtcgtccagtgatgaggaaact
agggaggagctgcgcagaattggtcttgtgactcctccccctgcctttggctgtcctact
gctcctcctcccccatcctctcttaccctattaccacggcgagttggggagggaggggga
gagggcggtcctgactccctgggtagacgaggagatgaggaagaaggaagtgatgaacgg
ctccatgacagctcctcgcccagttcactccctccctccattaccttggcctcccctcca
gctccagcttccccctcctccccacctgctactcaccaatcttcctcgtctgccgtcact
tccccatcaggcctaaagcctcgtcttcgttcaccaatcggccggggtcgctctgcgctt
cgggacccgctgctgaagcaatcatcagacagtgagcttctaccctacactgcatcctcc
tccccttcttcaccactctgttcctcccccaccggtggtggtggtcgacagccacgctac
ctattccagaggaggtccaagctgtggggaggaggggatgaccgcggggaggaacgccgg
ggcctcagcccagaggaaggagggggccgtccagcagcactgggaggtcaggggttgggg
tcggctgtggatctgaccagtcgctcggcatcagcactggagctgagtggcagggcaggt
tctggactggatctggtcaatcggctacagctgctcaacaaagacagtcattctctgggg
gaggagccgagccctcttgacccaggccggcggtcaccagtaggaggtgccagatgtgtg
gacagaggagagagtaaatcgttgttctccagtctcggtgaactccacaccatctcccag
cgaggatatggcgcaagctacacagtccgaccaggaagtcgctaccctgtcacccgccgg
agcccctccccctctccttccccctctgataggtcgatagggctcgcctcctcccccacc
ccatgttctgaaaggccagatttgagctcaggtcgcggtctaaccatcctgaagtcctcc
agtctaagtctcccctcagaaccaaaggaggttcgctttgtgatgcgaagtgccagcgca
cgaaccaggtcccgttcgccttcaccttcaccccacgcctcaccttgcccctccccagtc
ctcagtggaccgctgttggcccttcggccatggaggcagcggcccctcaacctgtggaat
aaatatgacgtgggtgactggctggagagcgtgggtctagctgaacatcgccagcgcttc
caggagcacgagattgaaggctcccatctccctgccctcaccaaagaggactatgtggag
cttggcgtcaccagactggggcaccggatcaacatcgagagggcactgagacaactgctg
gatggttccacttga
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