Hippoglossus stenolepis (Pacific halibut): 118101599
Help
Entry
118101599 CDS
T08308
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118101599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118101599
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118101599
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118101599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
118101599
NCBI-ProteinID:
XP_035003403
LinkDB
All DBs
Position
22:complement(17904749..17911662)
Genome browser
AA seq
559 aa
AA seq
DB search
MTGAALETHRSEAAVTRGMFGANRKKFMEGGVENDYADDSSLYYSQQSMFPPHRPDKDML
VSSSASSTGQLSQLGASLYGPQSALGFPMRGMNSSAAPQLSRSGLNQSASQLSSHASTPN
TGTMHTPPSPSRGILPMSTRSVLNHSQQVGGPTGQAGGMGGGGGDRGGGGGGGRSGSMGS
PSRSSPSIIGMPKQQQARQPFTINSMSGFGVNRNPGFNLNNSLSNNIFNGTDGSENVTGL
DLSDFPVLAERSRRDGGSNPTPLLNPLAGRAPYGGIGMVTKPSSEQSQDFSIHNEDFPAL
PGPNYQTKDPTSTNEDSKTNLNSSGKSTSNSDGPKFPGDKSSAPSNNNQQKKGIQVLPDG
RVTNIPVGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFAS
PWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLSRYGEDLLFYLYYMNGGDLLQLLAA
VELFNRDWRYHKEERVWITRAPGMEPTLKTNAYERGTYYFFDCINWRKVAKEFHLEYDKL
EERPHVPSTFNYNPAQQAF
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaccggagctgctctggaaacgcacagatcagaagctgctgtgacacgaggtatgttt
ggtgctaaccggaagaagtttatggaggggggggtggagaacgactacgcggacgactca
agcctctactacagccagcagtccatgttccctcctcaccgcccggataaagatatgttg
gtgtcttcctctgcttcctctacgggtcaactgtcacagctgggagccagtttatatggt
ccgcagagtgcgttggggtttcccatgcgtggtatgaacagcagcgcagcacctcagtta
agtcgaagtggtctgaaccagtctgccagccagctctccagtcatgccagtacacccaac
actggaacaatgcacacgcctccatcaccgagcagggggatcctgcccatgagcacccgg
agtgtcctgaaccacagccagcaggtggggggtcccacgggtcaagcgggagggatgggt
ggtggcggcggcgacaggggaggtggcggcggaggagggaggagcggcagcatggggagt
cccagccggtcgtcgcccagcatcatcgggatgcccaaacagcagcaagcacggcagcct
ttcactattaacagtatgtcagggtttggggtgaacaggaatcccggcttcaacctaaac
aactcattatccaacaacatcttcaatggaacagacggcagtgagaatgtgacggggctg
gacctgtcagatttcccggtgttagcagagaggagtcggagggacggaggttcgaatccc
accccgctgctcaacccgctggccggtcgggcgccttacggtgggattggcatggtaacc
aagccgtccagtgagcagtcgcaagacttctccatccataacgaagatttcccagctctc
cctggtcccaactaccaaacaaaagaccccaccagcaccaacgaagacagcaaaacgaat
ctgaactcgtcaggaaagtccacctctaactcagatggtccaaagttccccggcgacaag
agctctgcacctagcaacaacaaccagcagaagaaagggattcaggttcttcctgacggg
cgcgtgaccaacatcccggtcggcatggtaacggaccagtttggaatgattggcttgctg
acgttcatccgggcggcggagacggaccctggcatggtccacctggcgctgggctcagac
ctcaccacgctgggcctcaacctcaactcacccgagaatctctaccccaagtttgcgtct
ccctgggcgtcggctccatgtcgaccgcaggatatagacttccacgtcccgtcagagtat
ttaaccaacatccacatacgggacaagttagcagctatcaagttgtctcgatatggtgaa
gatctgctgttttatctctactatatgaacggtggagacctactacaactgctggctgca
gtagaactctttaacagggactggcggtatcacaaagaagagcgggtttggatcactcgg
gctccggggatggagcccacgctgaagaccaacgcctacgagagagggacctactacttc
ttcgactgcatcaactggagaaaagtggccaaggagtttcatctggagtacgacaaacta
gaagaacgacctcacgttccctccaccttcaactacaatcctgcccagcaggccttctga
DBGET
integrated database retrieval system
