Hippoglossus stenolepis (Pacific halibut): 118101656
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Entry
118101656 CDS
T08308
Symbol
rpap3
Name
(RefSeq) RNA polymerase II-associated protein 3
KO
K23002
RNA polymerase II-associated protein 3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118101656 (rpap3)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
118101656 (rpap3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_11
TPR_16
TPR_BSK1_C
TPR_14
TPR_19
TPR_12
TPR_9
TPR_17
ANAPC3
ARM_TT21_4th
TPR_7
Fis1_TPR_C
RPN7
DUF835
Vps39_1
Motif
Other DBs
NCBI-GeneID:
118101656
NCBI-ProteinID:
XP_035003471
LinkDB
All DBs
Position
22:complement(3901778..3907571)
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AA seq
662 aa
AA seq
DB search
MSGGNKAIELQLQMRQNAEELHSYMKELEGWECDMKTKDEELRTGGAQETEEKLPPVRNK
KYKTKMREKRKKKMEHAGTGNGDAGNGDAKAEDLQQSSRIKAYDYQSWDKFDVDEALAEM
DKEESPVESNESDSEEAAVDREKALSQKEKGNMLFKEGKYDEAIECYTRGMSADPYSPVL
PTNRATSFFRLKKFSVAESDCNLAISLDSNYFKAYARRGAARFALKNYESALEDYKMVLK
LDPGNTEAQNEVKKINEALGKEAPTLQSEATQPQEASTVDPEQQGLMEEQQRRQEAVLQK
DRGNAYFKEGKYEAAIECYSRGMEADGMNVLLPANRAMAFLKLDKYKEAEEDCTKAIYLD
STYSKAFARRATARVALRKLEEAQQDFQDVLKLEPGNKQALNELQKLQIDLGPSGLLQTD
DSSQRRTVQPIDKPTHLRSTKPLRRIEIEEVSGKATVPEVESSGSKTLIQEVVREPEEDS
SPLSTSPSAKIIKIEEMADAPSHVSEKLPPSRPTEQPAQVEISHPPETTTNTPSLVTDLP
PPPTSSFQLEADIRKIGKQPEVIYRYLRQIKAESYVKILQNSLEPDILNQILTTLHEFYT
KNETPAVILEILSSLSNVRRFNMAVMFMSSTEKKALKDLFDFLHRAELEESAVALLQKKY
GV
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggggaaacaaagccatcgagttgcagcttcagatgcgacagaacgcggaggaa
ctgcacagctatatgaaggagctggagggctgggagtgtgacatgaagacgaaggatgag
gagctgaggacaggaggagcacaggagactgaggagaaactgccacctgtgcgcaacaaa
aaatacaaaacaaagatgagggagaagaggaagaagaagatggagcatgctgggactggg
aatggtgatgctgggaatggtgacgcaaaagcagaggatctccaacaatcgtcaaggata
aaggcgtatgattatcaatcatgggacaagtttgacgtggacgaggctctggcggagatg
gataaagaagaaagtccagtagagtcaaacgagtctgactcagaggaagctgcagtcgat
agagagaaagctctgtcacagaaggaaaagggtaatatgttgttcaaggaagggaagtac
gacgaggccattgagtgttacaccagagggatgagtgcagatccttacagccctgtgctt
cccaccaaccgagccacctccttcttcagactcaaaaagttttctgtggcggagtccgac
tgcaacttagcaatctctctggacagcaactactttaaagcttatgcgcgaagaggagcg
gcccggtttgcactgaagaattatgaatctgctttagaagattataagatggttctgaag
cttgaccccgggaacacggaagcacagaatgaagtgaagaaaatcaatgaggcccttggg
aaggaggcaccgactttgcagagtgaagccacgcagccgcaggaggcttccacagtcgac
cctgagcagcagggactgatggaggaacagcagaggaggcaggaggccgttctacaaaaa
gacagagggaatgcttatttcaaagaggggaagtacgaagcagccatcgagtgctacagc
cgaggtatggaggcagacggcatgaacgtcctacttcccgccaacagagccatggccttc
ctgaagcttgacaagtataaggaggcagaggaagactgcactaaagccatttatctggac
agtacttactccaaggcttttgcccgtcgagcaacagccagagtggctttaaggaaactg
gaggaggcccaacaagactttcaggatgtgttgaagctggagccagggaacaaacaggcc
ttgaatgaactccagaaactccagattgaccttggtcccagtggacttcttcaaacagac
gacagctcacagaggagaacagttcagccgattgataaaccaactcacctgcgctcaacc
aaacctctgaggagaattgaaatcgaggaagtcagtgggaaagctacagtgcctgaggtg
gagtcaagtgggtccaagaccttgatccaggaagtggtgagggagcctgaggaggactcc
tctccactgtccacctcccccagcgccaaaataatcaaaatcgaggagatggcagatgct
ccctcgcacgtatcagaaaaactccctcccagcagaccgactgaacaaccagcgcaggtg
gaaatcagtcacccgcctgaaacaaccaccaacaccccctcattagttacagacctgccc
cctccacccaccagcagcttccagctggaggccgacatccgcaagatcggaaagcagcca
gaagtgatttacagatatctgaggcaaatcaaggctgaatcgtacgttaagattttacaa
aactccctcgaacccgacatcctcaatcagatcctgacgacgctgcacgagttctatacg
aagaatgaaacgcctgctgttatactggagatcctcagcagtctatcgaatgtgcggcgc
ttcaacatggctgtaatgttcatgtcgtccacagagaagaaagcgctgaaagacctgttt
gacttccttcaccgagctgagctggaagaatcagccgtcgcactcttacagaagaagtat
ggtgtgtga
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