Hippoglossus stenolepis (Pacific halibut): 118101893
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Entry
118101893 CDS
T08308
Symbol
eri1
Name
(RefSeq) 3'-5' exoribonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118101893 (eri1)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118101893 (eri1)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118101893 (eri1)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
118101893 (eri1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Pox_D5
Motif
Other DBs
NCBI-GeneID:
118101893
NCBI-ProteinID:
XP_047194611
LinkDB
All DBs
Position
22:16045674..16049070
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AA seq
343 aa
AA seq
DB search
MDEHKENINTKDVNVKMSATREEDEEEEKTKSCSRICPAAESDAQASQSNSDFSHPVYKE
IAVANGHINRMSKDELRIKLSELKLDTRGVKDVMKKRLKSHYKKQKLLQSTTEGGPTDTY
YDYICVVDFEATCEEDNPPDFLHEIIEFPMVLVSTHTLEIVDSFQEYVKPELNPQLSDFC
VKLTGITQKMVDDAAPFPEVLQRVVAWLQERELGTKYKYAILTDGAWDMSKFLNIQCRLS
DIRYPQFAKKWINIRKSYGNFYKVPRTQTKLSTMLEKLGLKYEGRPHSGLDDSRNISRIA
LRMLKDGCQLRVNERMHAGQLLSVPSTDPVEGAPPPHSPRSRE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacacaaagaaaacatcaacaccaaggacgtgaacgtgaagatgtccgcgacg
agagaagaagacgaagaagaagaaaagaccaagtcctgcagcaggatatgtcccgcagcg
gagtctgatgctcaggcgtctcagtccaacagtgacttcagtcatccggtctacaaggag
atcgccgtggccaacggacacatcaaccgcatgtccaaggacgagctgcggatcaagctg
tctgagctgaagctcgacacgagaggagtgaaggatgtgatgaagaagaggttgaagagc
cactataagaagcagaagctgctgcagtccaccaccgagggggggcccaccgacacctac
tacgactacatctgcgtggtcgactttgaggcgacgtgcgaggaagacaatccgccagac
ttcctccatgaaatcatcgagttcccgatggtcctcgtcagcacacacacgctagaaatt
gtcgacagctttcaggaatatgtgaagcccgagttgaacccgcagctttcagacttttgt
gtgaagttaacaggaataacacagaaaatggtcgacgacgcagccccgttcccagaggtt
ctccagcgagtcgtagcctggctgcaggagagagaactgggaaccaagtacaaatatgcc
atcttgactgacggcgcctgggacatgagcaagttcctcaacatccagtgtcgtctgagc
gacatcagatatcctcagtttgcaaagaagtggataaacataaggaaatcgtacggcaac
ttctacaaggtcccccgcacacagacgaagctgagcaccatgctggagaagctgggcctg
aagtacgaaggtcgccctcactccggcctggacgactcgcgcaacatctcccggatcgcg
ctgcgcatgctgaaggacggctgccagctgcgcgtcaacgagcgaatgcacgccggccag
ctgctgtcggtccccagcacggatcccgtggagggagcccccccgccgcacagcccccgc
agcagagagtag
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