Hippoglossus stenolepis (Pacific halibut): 118101912
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Entry
118101912 CDS
T08308
Symbol
scube1
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118101912 (scube1)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
118101912 (scube1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_CA
EGF_3
CUB
EGF
hEGF
TNFR_ELAPOR1_6th
Orbi_NS3
Motif
Other DBs
NCBI-GeneID:
118101912
NCBI-ProteinID:
XP_035003889
LinkDB
All DBs
Position
22:complement(1079613..1178125)
Genome browser
AA seq
1020 aa
AA seq
DB search
MGSACFSRDVCLFILLINTCRVMGNVGLSDADECAEGSDDCHIDALCQNTPKSYNCICKP
GYKGDGKQCEDMDECENDYNGGCVHECINIPGNYRCTCYDGFMLAHDGHNCMDVDECRDN
NGGCQQVCLNTMGSYECQCTHGFFLSDNQHTCIHRSDDGMNCMNKDHGCAHICREAPGKG
GVSCECRPGFELAKNQKDCTLTCNYGNGGCQHSCDDTDTGPVCGCHQKYALHSDSKTCIE
KDEAAIESSEFNATSVADVDKRVKRRLLMETCAVNNGGCDRTCKDTATGVRCSCPVGFTL
QPDGKTCKDIDECQENNGGCDHFCRNTVGSFECSCQKGHKLLTDERSCQDIDECSFERTC
DHTCINYPGSFECLCNKGYILYGLTHCGDIDECSINNGSCEFDCVNSQGGYDCVCPPGQK
LHWNRKDCIEVVKCLPNGKPAPRAQLTCTKNGGAEVCSLSCPSNALFLADSENSYTLSCG
VPVQPVKAPQKRNTTTALPSCADTLAPPIKQKARFKIKDAKCHLRPRNKEKHRDSSKQNL
QGGHFPCTDDCQVTFVNLKCDSSKKRRRGRKSPSKEVSHITAEFEMEMKEEEASDSCNVD
CVRERMKQKLQSAMRTLRKSINKQQFYIQFSGTEYEVAQKPSKVPEGAEACSTGHVFREG
KCASCGVGTFYSGEQEQCVQCPSGTYQDTGGQLSCEPCPSTDGQGVAGAKNVSQCGGQCP
AGHFSPDGFRPCQHCPLGSYQPEPGRVLCFTCGGGLMTKYDGSVSFRDCEAKVHCAPGHY
YNSTTHRCIRCPAGTYQSDFGQNYCITCPGNTTTDFDGATNVSHCKNQLCGGELGEYTGY
IESPNYPGDYPSNVDCVWTINPPHKRRILIVVPEIFLPIEDECGDVLVMRKSALPTSITT
YETCQTYERPIAFTSRSRKLWIQFKSNEGNSGKGFQVPYVTYDEDYQQLIEDIVRDGRLY
ASENHQEILKDKKLIKALFDVLAHPQNYFRYTAQESKEMFPRSFIKLLRSKVTRFLRPYK
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgcttgtttttcccgggacgtttgtttgtttatcctcctcataaatacttgc
agggtgatggggaatgtcggactctcagatgcagacgagtgtgcagagggttcagatgac
tgccacattgatgccctgtgccagaacacgccaaaatcctacaactgcatctgcaagccg
ggctacaaaggagatggcaagcagtgtgaggacatggatgagtgtgaaaacgattacaac
gggggctgtgtccatgaatgcatcaacataccagggaactacaggtgcacctgctacgat
ggattcatgctggcccatgatggacacaactgcatggatgtggacgagtgtcgggacaac
aatggtggatgtcaacaagtctgtctcaacaccatggggagctatgagtgtcagtgcacc
catggcttcttcctcagtgacaaccagcatacctgcatccaccgctctgatgatgggatg
aactgcatgaacaaggaccatggctgtgcccacatctgcagagaggctccgggcaaaggc
ggggtgtcgtgtgaatgccgccctggctttgagctggccaaaaaccagaaagactgtaca
ttgacgtgtaactatggaaatgggggttgtcagcactcttgtgatgacacagacaccggg
ccagtgtgcggctgccatcagaaatacgccttgcactcagacagcaagacctgcattgag
aaagatgaggctgcaattgagagctctgagttcaatgccacgtcagtagctgatgtggac
aagcgggtgaaacggcggctacttatggagacctgtgccgtgaacaacggcggctgcgat
aggacatgtaaagacacagccacaggggtgcgctgcagctgccccgtgggattcaccctg
cagcctgatggcaaaacatgcaaagacatcgacgaatgccaggagaacaacggaggctgc
gatcacttctgccggaacacagtgggctcctttgaatgcagctgtcagaaaggccacaaa
ctgctcacagacgaacggtcgtgccaagacattgacgaatgctccttcgagagaacctgc
gaccacacctgcatcaactaccctggcagcttcgagtgcttgtgcaacaagggatacatc
ctgtatggcctcactcactgtggagacatagatgaatgtagcatcaacaatgggagctgt
gagtttgactgcgtaaacagtcagggcggctacgactgtgtgtgtccacctggacagaaa
ctccattggaacaggaaagactgtatcgaggtggtgaaatgtctgcccaatgggaagcca
gcaccccgagctcaactgacctgcactaaaaatggtggggcagaagtctgctcactctcc
tgcccctccaatgccctcttccttgcagactcagagaacagctacacactgagctgcggg
gtgccagttcagcctgttaaagctcctcagaagaggaataccaccactgccttaccctcc
tgtgccgacacactggcgccgcccatcaaacagaaggccaggtttaagatcaaagatgcc
aagtgtcacctgaggccccgcaacaaggaaaagcacagagattcatccaagcagaacctg
caaggaggccacttcccctgcactgatgactgccaggtaaccttcgtcaacctcaagtgc
gactcatctaagaagcgtcggcgaggacgcaaatcgccttcaaaagaggtttcccacatc
acagccgagtttgagatggagatgaaggaggaggaagcctcagactcgtgtaatgtggac
tgcgtgcgggagaggatgaagcagaagttgcagagcgccatgcggacactcaggaagtcc
atcaacaaacagcagttctacatccagttctctgggaccgagtacgaggtggctcagaaa
ccatccaaagtaccggagggagctgaggcctgcagcaccggacacgtctttagagaggga
aagtgtgcgagctgtggtgtggggacgttctacagtggagagcaggagcagtgtgtccag
tgtccctctggcacataccaggacacggggggtcagctgtcctgtgagccatgtcccagt
actgacggacagggtgttgctggagccaagaacgtgtctcagtgtggaggtcagtgtcca
gcgggtcatttctcgcctgacggatttcgcccgtgccagcattgtccgcttggctcctac
cagcctgaaccaggccgagtgctgtgctttacctgtggaggaggcctcatgaccaagtat
gacggatcagtctcttttagggactgtgaggccaaagtgcactgtgctcctggacattac
tacaactccactacccaccgctgcatccgctgcccagcaggaacctaccagtcggacttt
gggcagaactactgcatcacttgccccgggaacaccaccactgactttgatggtgccacc
aatgtctcccactgcaaaaaccaactgtgcggaggtgagctgggggagtacacaggctac
atcgagtctcctaactaccctggagattatccgtcgaatgtggactgtgtctggaccatc
aacccaccacacaagaggcggatcctcattgtggtaccagagatcttcctccccattgag
gacgagtgtggagacgtgctggtcatgaggaagagtgcccttcccacctccatcaccacc
tacgagacgtgtcagacctatgagcggcccatcgcctttacctctcgctctcgcaagctc
tggatccagttcaagtctaatgaggggaacagtggcaaaggcttccaagttccgtatgtc
acctacgatgaggactaccagcagctgatagaggacatagtgcgagatggcaggctttac
gcctctgagaaccaccaggagatcctgaaggacaagaagctgatcaaagccttgtttgac
gtgctagcccacccccagaactacttcaggtacacggctcaggagtccaaagagatgttt
cctcgctccttcatcaaactgctgcgctccaaagtgaccagattcttaaggccgtacaaa
tag
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