Hippoglossus stenolepis (Pacific halibut): 118101971
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Entry
118101971 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: caprin-2
KO
K18744
caprin-2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118101971
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
118101971
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
C1q
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
118101971
NCBI-ProteinID:
XP_047194618
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Position
22:complement(787436..807148)
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AA seq
699 aa
AA seq
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MVQLCLSPTEDVTTTLELSEEGSERQEDPMMAGNPNVELNTFQLNLEVSTVYIGYETYIE
DGLICLKHKVRNLEKKKLKLEDYRKRLTRSEELNKDQLAAVEKYQEVLHNLAFAQELHKT
LDDLTQSLLRAQKKAVKKEQVAKVEVERRRLATVLQIQNLLHSLQHEHIRRDLQVGHNQA
PHISAQKLRSLGQLATLLGVKRNNQLNLGEQMEQAAVVYLDLLEGTDKPVAGSTFKLLKE
ELTRLLNCKYFNCLLPNKTPEIFPSKISHSPISKSKGNETKVSNENWREDLEAIRKREPP
DNWDMECPVHKPWKGAATYIYKVPTKKQSDCKQKKERKAKGEQNAKLAVHMDMPQVVFNS
QSTLPKDPILRKQHLEDFMTKIHGSFSFMQDSVLDGESPSNNGHPGLKRQSSGLPSPLVV
QTDLRSPADFLLKAIHSTPLPTRLHGVQSQSDQWRSVPGVSLQGEYIISPEWELNYKPES
VVFSECSYNYCQYTKPHLVAPSEGEPQPTAWSDCSQLSSPDGEGSFTSIVDSGLGDSLSV
STVEGLTYSPQPTPPCNVPMQLYPLSQPLQVAFLPLHCQLCPCNLDQPIVFDQLHSNLGR
YTTPVSAASPAVSGAYVFIFHILKLAITVPLYINLMRNEDVMSVAYANDGAPGHGTASNH
AILPLFQEDQVWLRLHHNCTIYGSTWKYSTFSGFLLYQK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtgtctgtcccctacggaggatgtcaccaccacacttgagctctcagag
gagggcagtgaaaggcaggaagaccccatgatggctggtaacccaaacgtggagctgaac
acctttcagctcaacctggaggtctccactgtctacattggctatgaaacctacatagaa
gatggcctcatctgccttaaacacaaggtccgcaacttggagaaaaaaaagctgaaactg
gaagactacaggaaaaggctgaccaggagtgaggaactaaacaaagatcaactggcggct
gtggaaaagtatcaggaggtgttgcataacctggcatttgctcaggagctacacaaaacc
ctagatgacttgactcagagtttgctgagagcccagaagaaggcagtgaaaaaggagcag
gtggcaaaggtggaggtggagaggaggcgtctggcaacagtgcttcagatacagaatctt
ctccacagcctgcaacatgagcatattaggagagacttgcaggtcggacacaatcaggca
ccccacatctcagcccagaagctgcgcagcctaggtcagcttgccaccctgctgggagtc
aagaggaataaccaactgaatttaggggagcagatggaacaggcagctgtggtgtacttg
gacttgttggaggggacagacaagccagttgctggatccacatttaagctgttgaaagag
gagctcaccaggctgttgaattgcaaatacttcaattgtcttctacccaacaagactcct
gagattttcccgagcaaaatcagccacagccccatatcgaagtcaaaaggaaatgaaacg
aaagtttctaatgagaactggagggaggatttggaggccataagaaaaagggagcctcct
gacaactgggatatggagtgcccagtccacaaaccatggaaaggagctgctacttatatc
tacaaagtccccaccaagaaacaatctgactgcaaacagaaaaaagagaggaaagccaaa
ggagagcaaaatgccaagttggcagtacacatggacatgccccaggtagtttttaactct
cagtctaccttacccaaagaccccatcctgaggaagcagcacctggaggacttcatgaca
aagatccatggctccttcagtttcatgcaggactctgtccttgatggtgagagcccctcg
aataatggccaccctggactgaagagacagtcatctggattgccctctcctctggtagtt
cagacagacttgagaagcccagcggatttcctgctcaaagcaattcattccaccccactg
cctactaggcttcacggagtacaaagccagtctgaccagtggagatcagtgcctggagtc
agtcttcaaggtgaatacatcatctccccagaatgggaactgaactacaaaccagaatct
gtagttttctctgagtgcagttacaattactgccagtacacaaagccccacctggttgcg
ccctcagaaggcgaaccacagcccacagcatggagtgattgttcccagttgagtagccca
gacggagagggatccttcacaagtattgttgactctgggctaggtgactcattgtcagtc
tccactgtggagggtctcacttactccccacagccaacaccaccctgcaatgtaccaatg
caactctacccactctcccagcctctgcaagtggccttcctgcctctgcactgccaactt
tgcccgtgtaatctggaccaacctattgtgtttgaccagctacacagcaatctggggaga
tatacgacacccgtatcggccgcttcacctgctgtcagcggagcgtatgtcttcatcttc
cacattctgaagctcgccatcaccgtgccgctctatatcaacctcatgcgcaacgaggat
gtgatgagtgtcgcttatgccaatgatggagccccaggtcatggaacagccagcaaccac
gccatcctgcctctcttccaagaggaccaagtttggcttcgtttgcatcataattgcact
atctatggcagcacctggaagtacagcaccttctctggcttcctattgtaccagaaatga
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