Hippoglossus stenolepis (Pacific halibut): 118101979
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Entry
118101979 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: complement C3-like
KO
K03990
complement component 3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04080
Neuroactive ligand-receptor interaction
hsp04145
Phagocytosis
hsp04518
Integrin signaling
hsp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118101979
04518 Integrin signaling
118101979
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
118101979
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118101979
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118101979
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118101979
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118101979
Peptidases and inhibitors [BR:
hsp01002
]
Peptidase inhibitors
Family I39: alpha2M family
118101979
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Phagocytosis
Opsonins
118101979
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118101979
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TED_complement
MG1
A2M_BRD
A2M
NTR
A2M_recep
MG4
MG2
C3_CUB2
ANATO
C3_CUB1
Transglut_C
Motif
Other DBs
NCBI-GeneID:
118101979
NCBI-ProteinID:
XP_047194581
LinkDB
All DBs
Position
22:complement(3636520..3659983)
Genome browser
AA seq
1569 aa
AA seq
DB search
MSRTPLWLLASLAFASVTSLVDGSPLKVMSAPNLLRVGTAENVFVECQDCEGEDIRVEIN
VMNHPTKNKRLATTSVTLTSAEHFQALVQIKIPAGDFSKDANMKQYVYLQAQFPDRLLEK
VVLVSFQSGYIFIQTDKTLYTPNSKVHFRMFAVTPRMEPVERDEEIESDASIAIEFVTPE
GLVLPLDPVSLSSGIHSGYYQLDEIISPGLWKVVAKFCSTPQESFSAKFEVKEYGGEMVE
AELRGIQIVTSPLVTSPYTIHFKRTPTFFKPGMTFDVAIEVTNPDETPAQGVAVVVNPGE
VEGLTAANGYVKLTVNTVGGLPRLMINAKTNDPRISPERQAEANMVAVPYNTKSQNYIHI
GVYTAEVELGNNLKFTLSLKQQSNQAIDITYLILSRGQLIKHGRYRTRGQVLIFLMVPIT
KDLLPSFRIIAYYHLTDNEVVSDSVWVDVKDSCMGSLELESSRLAPSYEPRRIFSLKVTG
DPEATVGLVAVDKVQKNKHRLTQKKVWDIVEKYDTGCTPGGGKDSMSVFYDAGLLFKSGN
ASGTPYRTERKCPVPTRRKQSPTIMPVTTSLVSHYDNELQHGMRETSLSYTCQTHSECIS
DGASCAEAFLHCCTEVENLRDLAHSEDDDDSYMDSNEIVSRTRFPESWLWSDIKLRPCPR
QTPDCSTSFMKMLPLQDSITTWQFTGISLSRTHGICIGEPLDVIVRKDFFIDLRLPYSAV
RGEQLEVKAILHNYSPDVITVRVYLIEEEHVCSAASKHARYRQEVRVGGQTTRSVPFVII
PMKEGKFSIEVKAAVKDSTLSDGVMKMLQVVPEGVLVKQQQIITLDPSNKGVGGTQVEII
NSEIPKKYLVPNTLTTTQISVTGRGKIAPMVENAISGQSMGSLIYQPAGCGEQNMIHMTL
PVIAATYLDKTNQWEAVGFEKRNKALQHIQTGYKNELAYRKADGSFAVWAHHKSSSWLTA
YVTKVFAMVNGLMVVNTNLICDAVKYLILNAQQYDGVFREVGNVNDGEMMGDVRGSESEA
SMTAFILIAMQESRTLCAATVSSLPGSVGKAVQYLERRLDSLTNPYAVAMTSYALANEGK
LNREVLFKFASPELSHWPVPKGHIYTLEATAYALLALVKVGAFEEARPIVRWFNQQQKVG
GGFGSTQATIIVYQAVAEYWASAKEPEYDLYVDILLPGKSKPTKFYFNQENSYATRRSKI
NDINQDVKVTATGSGEATLTMVSMYYALPKEKESDCQKFNMSVQLIPEKMDADEKIYKLK
IEVLYKDREQDAGMSVLDIGLLTGFTVNTNDLDLLSKGHVRNISKYEMNTVLSERGSLII
YLDKVRRKPFFPLSPFSLDCSVSTSHLLXISLQVSHTRPEEITFRIHQKMKVGILQPATV
SVYEYYDQRHCVKFYHPERKAGQLLRLCRNDERKCAEENCSMQKKGKISNDLRIEISCET
TPTSKIDFVYKVRLENFTEGLSTDICTMRILEVIKEGSFDVGSQGKQRTFLSSPHCRESL
DLGKDKMYLIMGTSKDIHRDEQHQSYQYVLGERTWIEYWPTEAKCQVEEHRPTCLGLEEM
VQLYELFVC
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggactccactgtggcttctggcttcgctggcctttgcctctgtcacctcactg
gttgatggatctccactgaaggtgatgtctgcccccaacttgctgcgcgtaggaacggca
gaaaatgtctttgtggagtgtcaagactgcgaaggagaagacatcagggtcgaaatcaac
gtgatgaaccatccaaccaagaacaaaaggctggcaaccacatctgtgacgcttaccagt
gcagaacacttccaggcactggtacaaataaagatccctgctggagacttcagcaaggac
gccaacatgaagcagtacgtctacctacaagctcagttccccgaccgcctgctggagaaa
gtcgtcttggtgtccttccagtctggctacatcttcatccagactgacaagaccctctac
accccaaacagtaaagttcatttcagaatgtttgcagtgacgccccgcatggagccggtg
gagagggacgaggaaattgaaagcgacgcttccattgccattgagtttgtgactcctgaa
ggcctcgttttacctctggatccagtctctctgagttcagggatccactctggatattac
caactcgatgaaattatcagccctggactttggaaagttgtggctaagttctgcagtacc
ccacaggagagcttttctgcaaagttcgaggtcaaagaatatggtggtgagatggtggag
gcagagttgagaggtatccagattgtcacatcacccttagtcacatcaccctacaccatc
cacttcaagagaacgcccacatttttcaaaccgggaatgaccttcgatgttgcgattgaa
gtcacaaatccagatgaaactccggcacaaggtgttgcagtggtggtgaatccaggtgag
gtggagggtttaactgcagccaatggctatgtaaagcttacagtcaacacagtgggcgga
cttccaagactgatgatcaatgccaagaccaacgatcctcgtatttcacctgagagacaa
gcagaagccaacatggtagctgtcccatacaacactaaaagccaaaactacatccacata
ggtgtgtatacagcagaggtggaattaggaaacaatctgaaattcaccctcagtctaaaa
cagcagtcaaatcaagccattgacatcacatacctgatcctgagcaggggtcagttgatc
aaacatggccgttacaggacaagaggccaagtgttgattttcctgatggttcccatcacc
aaagacctgctgccatcattccgcatcatagcctattatcatctaactgacaatgaggtg
gtgtcagactccgtgtgggtggatgtcaaggactcctgcatgggttcgctggagctggaa
tcttcgagacttgctccgtcctacgagcctcgcaggattttttctctgaaggtcaccgga
gatccagaggccacggtgggactggtagcagtggacaaagttcagaaaaacaagcaccgc
ctcacccagaaaaaggtgtgggacattgtagagaaatacgacacaggctgcacacccggc
ggagggaaggacagtatgagtgtgttctacgatgccggcctgttgttcaagtccgggaat
gcctcggggactccctacagaacagagaggaaatgtccggtccccaccaggaggaaacaa
tctcccactataatgcccgtcacgaccagcttagtgagtcattatgacaatgaactgcag
catggcatgagggagacctccctgtcatacacttgtcagacgcacagtgagtgcatctcg
gacggtgcatcctgtgctgaggctttcctgcactgctgcacagaggtggagaacctgcga
gacttggctcacagtgaggacgatgacgacagttacatggacagcaatgaaattgtttct
cgcaccaggttccctgagagttggctgtggtcagacatcaaactgcgtccttgcccgcga
caaacaccggactgttccacatcctttatgaagatgcttcctttgcaagactcaatcaca
acctggcagttcactggcatcagtctgtcaagaacccacggaatctgcattggcgaacca
ttggacgtgattgtccggaaggacttcttcattgatctcagactgccctactctgctgtc
cgtggagagcagctggaagttaaggcgatcctccacaactacagccctgatgttatcaca
gtgcgtgtgtatctgattgaggaggagcatgtgtgcagcgcggcttctaaacacgcaagg
tatcgtcaggaggtcagagtcgggggacaaaccacacgatctgtccccttcgtcatcatt
cccatgaaggaaggaaaattcagcattgaggtcaaagcagctgttaaagactcaacactc
tctgatggagtcatgaagatgctgcaggtggtgccagaaggtgttctggttaaacaacaa
cagattataacactagacccctctaacaaaggtgtcggaggtacacaagtggaaattatc
aacagtgaaatcccaaagaaatatttggttccaaacacacttactaccacacagatttct
gtgacagggaggggaaaaattgctccaatggtagagaacgcaattagtgggcagtcgatg
ggtagccttatctaccagccggcaggctgcggagagcagaacatgatccacatgacctta
cccgttattgcagccacttatttggacaaaaccaaccagtgggaggctgtgggctttgag
aaacgaaacaaagccctccagcatatccagaccggctacaagaacgagcttgcctaccgt
aaagctgatggctcttttgctgtgtgggcccatcacaaaagtagctcctggctgacagcg
tacgttaccaaggtgttcgccatggtcaacggtctgatggtagtgaataccaacttgatc
tgtgacgctgtgaagtacctgattctcaacgcgcagcaatacgacggcgtgttcagagaa
gtcggaaatgtgaacgacggagaaatgatgggtgatgtgcgtggctccgaatcagaagcc
tccatgacggccttcatcctcatcgccatgcaggagtcacggactctatgtgctgccact
gttagtagtcttccaggcagtgtaggcaaagcggtgcagtacctggagaggcgtttggac
agcctcaccaacccatatgctgttgccatgacatcgtacgccttggccaacgaaggcaaa
ctgaaccgagaagtcctcttcaagttcgcttctccagagctgtcccactggcctgtacct
aagggacatatttacacactggaggccacagcttacgctcttctggctctggtcaaggtc
ggggccttcgaagaagcccgacctattgtgagatggttcaaccaacagcagaaggtgggc
ggaggatttggatcaactcaggctaccattatagtgtaccaggctgtagcagagtactgg
gccagtgctaaagaaccagagtacgatctgtatgtggatatcttgttgccgggcaagtca
aagcctacgaagttttacttcaaccaggaaaacagctatgccacaagaagatctaaaatc
aatgatataaaccaggatgtgaaagtgactgccacaggatcaggagaagcaacattgaca
atggtgtctatgtattatgctctacctaaagagaaggagagcgactgtcagaagttcaac
atgtcagtgcagctcatcccagaaaaaatggatgccgatgagaagatatacaagctgaaa
atagaggttttatataaggacagggagcaagatgcaggcatgtcagtcttggatatcggt
ttgctgactggctttaccgtcaacactaatgacttggacttattgtctaaaggacatgtc
cgcaatatttcaaaatatgagatgaacactgtcctgtcagaaagaggctcactgatcatc
tacctggacaaggtaagacgtaagcctttcttccccctttcacctttttctctagactgc
tctgtctctacatcacatttgctttaaatttctctgcaggtttctcacacacgaccagag
gagatcacatttaggattcaccagaagatgaaagtgggcatcttacagccagccactgtt
tctgtctatgaatattatgaccaaagacattgtgtgaaattctatcatccagagaggaaa
gctggacagctactgaggctctgcagaaatgatgagcgcaaatgtgccgaagagaactgc
agtatgcagaagaagggcaagatcagcaatgatctgcggatagaaatatcttgtgagact
actcctaccagcaaaatagatttcgtgtacaaagtgagactggagaatttcacagagggt
ttgtctactgacatttgcacaatgaggatattggaagtgatcaaagaaggaagtttcgat
gtgggttctcaggggaaacagcgcacattcctgagttctccacactgcagggagtcttta
gatctgggcaaagacaaaatgtacctcatcatgggcacgtcaaaagatattcacagagac
gaacaacatcaatcgtaccagtacgtgctcggggaaagaacctggatcgagtactggccc
acagaagccaagtgtcaagtcgaggagcacagaccaacgtgtttgggcttggaggagatg
gtccagctgtacgagctctttgtatgttag
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integrated database retrieval system
