Hippoglossus stenolepis (Pacific halibut): 118102257
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Entry
118102257 CDS
T08308
Symbol
rin1b
Name
(RefSeq) ras and Rab interactor 2
KO
K17638
Ras and Rab interactor 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118102257 (rin1b)
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
118102257 (rin1b)
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
YjcZ
Motif
Other DBs
NCBI-GeneID:
118102257
NCBI-ProteinID:
XP_035004212
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Position
23:891384..911029
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AA seq
784 aa
AA seq
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MQGGGSTQRGSARLFSVLDRLLLTHPVWLQLSLNHDSALYILLREPVGTFLVRKCSSSQR
KVLCLRVTADRSASSVKECFICEEDSTFALESSALSFPDLCRLVAFYCVSRDVLPFPLEL
PDAIAKATTHRQLEAISHMGQDFWSSPGSPDVQNGPVAPSASTSGSPAAVAQDRCTLLSR
GRQGKLCFINPLFLQLEVYKQPQLTHHSASNKRHRFTRSIRLRLSETSMNLSLEGVGSYS
PPSSLEQPDGAERLQRANPQRRVHPGAGVLRRTPAVSPGSAEEEDTMSVYVPEVEASAKP
QQSERAPGIEVAVLALERRPAPSLAELDSSSSFSSMDEDNDSDSDPDSSVQGQMLAHHRP
PLVRSRGRGGLHRMSEAFVCFFAPDKRLTRLVEELSRDRRSTFGGMVQDFLLAQREVLKA
LASSSPPSSSSAPVTAVQLLQGLRLFLSQARCCLLDSGELEPPIETLVPENEKDLALERA
MFSCVLRPLRSHLEKALVALHNQDGSSQRLTQNLLRLRGDAAMERLGVRTGVPDSRGVER
VKQKLVLMQRTHSPIDKVLLLLQVCKCVHKAMGCLLGQEVSWDDFLPSLSYVMVECNRPH
ILLEVEYMMELLEPSWLGGEGGYYLTSVFASLCLIRSLDGEQPAASCLTPEAQEALKEWS
SRRSREAQRQKESQQNQRCVRILFQDGERSAVRTLQWRAGESSQALAQLCADTFGVSDPQ
QYTLYWRSGGEMRALPPQAQPQDLAGHSEGGPSLSYLRTDHDFSKMRRLTRGGAVDLSES
VCEE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggggggcagcacacagcgaggctctgcgcggctcttcagcgtcctggatcgt
ctcctgctcacgcatcccgtgtggctgcagctgtcactcaaccacgactccgccctctac
atcctgctcagagagcctgtggggacctttctggtgcgaaagtgcagctccagccagagg
aaggttctgtgtttgagagtgacagcggaccggagtgcctcctctgtgaaggagtgcttc
atctgtgaagaggactccaccttcgccctggagagctccgccctcagcttccccgacctg
tgtcgactggtggccttctactgtgtcagcagggatgtgttgcctttcccactggagctg
ccggacgccatcgccaaggccacaactcaccggcagctggaggccatttcccacatggga
caagacttctggagctcgccaggttctccagacgtccaaaacggacccgtggcgccatct
gcatccaccagcggcagcccggcagcggtggcccaggaccggtgcaccctgctgagccga
ggcagacaaggcaaactctgcttcatcaacccgctcttcctgcagctggaggtttacaag
cagccgcagctcacacaccacagtgcctccaacaagcggcaccgcttcacgcgcagcatt
cggctccggctctccgagacctccatgaacctgtccctcgagggcgtcggctcctactcg
cctccgtcgtcactggagcagccggacggggcggagaggctgcagagggccaacccacag
aggagagtccaccctggggcgggggtcctgaggagaacccccgctgtgtcgccaggttct
gcagaggaagaggacacgatgtccgtctatgtgcctgaggtggaagcgtctgcgaagccc
cagcagtcagagcgagcgccaggcatcgaggtggcggtcctggccctggagcgccgcccg
gccccgtccctggccgagctggacagcagcagctccttcagcagcatggacgaggacaac
gactcggattcggatccagacagctcggtccaaggccagatgctcgcccaccatcggccg
cccctcgtgcgctccagagggcgcggcgggctgcaccgcatgagcgaggccttcgtttgt
ttctttgctccggataagcgtctgacgaggctggtggaggagctgtcccgggacaggcgc
tccaccttcggggggatggttcaggacttcctgctggcacagagggaggtgctgaaagcc
ctggcctcctcgtcaccaccctcctcttcctcagctccggtgacggccgtgcagctcctg
cagggtctgaggctctttctgtcccaggccaggtgctgcctgctggacagtggagagctg
gagccgcccatcgagacgctggtgccagagaacgagaaagacctggcgctggagcgagcc
atgttctcctgcgtgctccggcccctgaggtcccacctggagaaggccctggtggcgttg
cacaaccaggacggctccagccagcgcctcacccagaacctgctccgtctgagaggggac
gccgccatggagcggctcggcgtgcggacgggcgtcccggacagccgcggggtagagcgg
gtgaagcagaagctggtgctcatgcagcggacgcactcgcccatcgacaaagtcctgctg
ctgctgcaagtttgcaagtgcgtccacaaggccatgggctgcctgctcggacaggaagtg
agctgggatgacttcctgccgtccctgtcgtatgtgatggtggagtgtaaccggccccac
attctgctggaggtggagtacatgatggagctgctggagccgtcctggctcggaggggag
ggcggttactacctgaccagtgtgttcgccagcctgtgtctgatccggagcctggacggg
gagcagccggcggcgagctgcctgacgcccgaggcccaggaggcgctgaaggagtggagc
agcagacggagccgagaagcccagagacaaaaggagagccagcagaaccagaggtgcgtg
aggatactgttccaggacggggagcgcagcgctgtgcggacgttgcagtggagagccggg
gagagcagccaggctctggcgcagctgtgcgccgacaccttcggcgtgtccgacccgcag
cagtacaccctgtactggcgcagcggcggcgagatgagggccctgccgccgcaggcccag
ccccaggacctggcgggccacagcgaggggggcccctcgctctcctacctgaggaccgac
cacgacttcagcaagatgcggcggctcaccaggggtggcgccgtggacctgagcgagtcg
gtgtgtgaggagtga
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