KEGG   Hippoglossus stenolepis (Pacific halibut): 118102282
Entry
118102282         CDS       T08308                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b isoform X1
  KO
K21944  period circadian protein 1
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsp03400]
    118102282 (per1b)
DNA repair and recombination proteins [BR:hsp03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    118102282 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 118102282
NCBI-ProteinID: XP_035004254
LinkDB
Position
23:5868446..5884308
AA seq 1418 aa
MSYENSKLMASSSTRGRVARANGKNNDQEAESEGFNSMKTIGGQPSANITIPVQGSGARG
GSSPSAGSGSGGSSRDQRGPNSDDMDGLSSGNDSGERESEGGMERGSGSRGRQSTSSSHS
SSNGKDSGMMLETTESNKSSNSQSLSPPSCSVAYSTSGCSSDQSARAQTQKELMKAIKEL
KLRLPSERKSKGHSSTLNALKYALQCVRQVRANREYYHQWSVEECEGCSLDLSTFTIEEL
DNITSEYTLKNTDTFSMAVSFLSGKVVYVSPQGSSLLRCKSDCLQGTMFSELLAPQDVST
FYSGTAPCRLPSWASCIGSVSPQEKSMFCRISANRVQGGEMRYYPFRLTPYQLTLQDSDT
AEPQPCCLLIAERVHSGYEAPRIPADKRIFTTSHTPSCLFQEVDERAVPLLGYLPQDLVG
TPILLYIHPEDRPLMVAIHEKIFQFAGQPFDHSPLRMCARSGEYVTIDTSWSSFVNPWSR
KVAFVVGRHKVRTSPLNEDVFTMPHGCESQTTTPDIVQLTEQIHRLLGQPVHGGGSQGYS
SLGSSGSRGSHRSRHQHHSASATSSSDGNGPAMDKAVVAVALQKPMTFQQICKDVHMVKT
SGQQVFIESRNRPTPRKTANTATANIRAINSDPIRGLIADMTKPPKALVPAPIAQKEPPT
GYSYQQINCLDSIIRYLDSCNIPNTVKRKCGSSRTASSTSDDDKQQEASGNNKVNLVGEP
PALPPLTMATKAESVASVLSQCSFSSTIVHVGDKKPPESDIVMEDAPTTPTLAPPRSLNM
PTPPTGGLMLPASTATAPPPPMSPLTQTAQPDRDSRRSCSVGGGGGGGRLGLTKEVLSAH
TQQEEQAFLDRFNDLSKLRVFDQTASSTVRCLTPAANPLSRGVRCSRDYPAAGGSTGHRR
GRGGKRLKCQESSDQHSSLGMSGSRLDPRTSAAPMPLHVPHGPLTNSSSWPSVGSRASIP
SAPFAPGMLPIYPVYPPLTQPLPIPDPSRFPPTQMVPPMMALVLPNYIFPQMGAPISQPG
ATPGHFYNPNFTYPSATPAIAPAMIPTVISSPVPIPGSCVPSRSSTPQSYNQTPVDREGA
VSPLFQSRCSSPLNLLQLEETPSNRLEVASALAASQQATPSAQGGAAGGPSSGNQRSADD
TSKENENGEANESNQDAMSTSSDLLDLLLQEDSHSGTGSASGSGFSGTRSSGSGSGSNGC
SSSGTSGNSSSQGSHTSKYFGSIDSSENDHSRKQPAGGSSSAGGDGGEEQFIKCVLQDPI
WLLMANTDDKVMMTYQLPVRDMETVLREDREALRSMQKHQPRFSEEQKRELSQVHPWIRT
GRLPRAINISGCTGCKVPPSVAPATPFDLEMELCSEQKAQEGSAGRGKKNLSETPMDETR
PEVKEEEEKGTKRQKGSHDMMAEEQTACSQAAESAMSH
NT seq 4257 nt   +upstreamnt  +downstreamnt
atgagttatgaaaactcaaaattaatggccagcagcagcactcgggggagggttgcaagg
gccaacgggaaaaacaatgaccaggaggcagagtcggaagggtttaactctatgaaaacc
attggcggtcagcccagtgccaatatcaccatcccagtgcaagggagcggagcccgtgga
ggctcatctcccagtgcagggtcgggatccggaggttcatccagagaccagaggggtccc
aactcggatgatatggacggcctctccagcggtaacgactctggggagcgggaaagcgaa
ggcgggatggagaggggaagcggctcacgtgggcgccagtccacgagcagctcccacagc
tcgtcgaatggcaaggactcaggcatgatgctggagaccacagagagcaacaagagctcc
aactcccagagcctgtcccctcccagttgctccgtggcctacagcacctccggctgcagc
agcgaccagtcagcgagggcccagacccagaaagagctaatgaaggccatcaaggagctg
aagctccgtctgccatctgagcgaaagtcaaagggtcactccagcactctaaatgcactg
aaatacgcacttcagtgtgtccgacaagtcagagcaaaccgggagtactaccaccagtgg
agtgtggaggagtgtgaaggctgcagtctggatttgtccaccttcacaatcgaggagctt
gataacatcacctcagaatacaccctcaaaaacaccgacacgttctccatggccgtgtcg
ttcttgtcagggaaggttgtgtacgtatccccccagggctcgtccctgctgcgctgcaag
tccgattgtcttcaggggactatgttctctgagctgttggccccgcaggatgtcagcact
ttctacagcggcacagcaccctgccgccttccttcctgggcctcctgcatcggttccgta
tctcctcaggagaagtccatgttctgtcggatcagtgctaaccgggtacagggcggcgag
atgcgctactacccattccgcctcacgccgtaccagctcactcttcaagactctgacact
gctgagccacagccctgctgcctgcttattgcagagagggtccactctggatatgaagct
cctcgtatcccagcagacaagaggatcttcacaaccagtcacactcccagctgcctcttc
caggaggttgatgagagggcagtgccgttgttgggttaccttcctcaggacttggtggga
acccccatcctgctttacatccacccagaggatcggccactaatggtggccatacacgag
aagatctttcagttcgcagggcagccgttcgaccattcgcccctgaggatgtgtgcccgc
agcggggagtatgtgaccatcgacaccagctggtcttcctttgtcaacccctggagccgc
aaggtggcattcgtcgtagggcgccacaaagtcagaacgagccctctgaatgaagacgtg
ttcaccatgcctcatggctgcgagagccagaccaccacgcccgacatcgtgcagctgact
gagcagatccaccggctccttgggcagccagtgcacggcggcggctcccagggctacagc
tcgctcgggtccagtggatcgcggggctcccaccggtcacgccatcagcaccatagtgcc
tcggccacctcgtccagcgacggcaacggcccggccatggacaaggcagttgttgctgtt
gctttacaaaagcctatgacattccagcagatctgcaaagacgttcacatggtcaagacg
agcggacagcaagttttcatcgagtcccgtaatcgtccgacgcccagaaaaaccgccaac
acagctacagcaaacatcagagccatcaacagcgacccaatcagaggtttgatcgccgac
atgacaaaacctcccaaagctttagtccctgcaccgatcgcacagaaggagccgccaacc
ggctactcctaccagcagatcaactgtctggacagcatcataaggtacttggacagttgc
aacattcccaacacagttaagaggaagtgtggctcctcccgcacagcctccagtacatct
gacgatgacaaacagcaggaagccagcggcaacaacaaagttaacctcgtaggtgaacca
cctgctctgccccctctgaccatggccacaaaggcagagagtgtagcctcagtcctgtcc
cagtgtagcttcagcagcaccatcgtgcatgtgggtgacaagaagcctcccgagtcagac
atcgtcatggaggacgcaccaacaactcccacgctagcccctcctcgttctctcaacatg
ccgacaccgcccaccggcggcctgatgcttcccgcaagcacagccaccgcaccccctcct
cccatgagccctctcacacaaactgctcagccagacagggacagccggagaagctgcagt
gttggtgggggcggaggaggaggtcggctaggtctgacgaaggaggtgctctctgcccac
acccagcaggaggagcaggcattccttgaccgcttcaatgacctcagcaagctgcgcgtg
ttcgatcagacggcatcttcgactgtgcggtgcctcacccctgctgccaacccactgtca
cgaggagtgcgttgttcccgtgactaccccgctgcaggaggcagcaccggtcaccggcga
ggccgcggaggaaaaagactcaagtgccaggagtcatctgatcagcacagctctctggga
atgagcgggagccggctagaccccagaaccagcgccgcccccatgcccctccacgtgcca
catggacccctgacaaactcctcgtcctggccctctgtaggctcccgggccagcattccc
tccgcccctttcgctcctggtatgcttccaatataccctgtatacccaccgctcactcag
ccactacccatcccagacccttcacgcttccccccgacccagatggttcctcccatgatg
gcgctcgttcttcccaactacattttcccccagatgggagcgcccatctctcagccgggt
gccaccccaggacacttctacaatcctaacttcacataccccagtgccaccccagccatt
gccccagccatgatccccactgtcatctccagccctgtgcccattcccggcagctgcgtc
ccgtctcgtagcagcacgccacagtcctacaatcagacgccagtggaccgcgagggcgcg
gtgtcccccctcttccagtcccgatgctcctcccccctcaacttgttgcagctggaggag
acgccaagcaaccggttagaggttgcctctgccctggcggcatcacagcaagccacgccc
tctgcacagggcggtgctgctgggggaccgagctctggcaatcagaggagcgctgatgat
acctccaaggagaatgagaatggtgaagctaatgagtccaaccaggatgcaatgtccacc
tccagcgacctgctggacctgctgctgcaggaggactcccactcaggcaccggctcagct
tctggttcagggttctcgggaaccaggtcctcgggttcaggctccggctccaacggatgc
agttcctctggcaccagcggcaacagcagcagtcagggcagccacaccagcaagtacttt
ggcagcatcgactcatcggagaacgaccactcccgcaaacagccagcagggggcagcagc
agtgcagggggagatggaggcgaggagcagttcatcaagtgtgtcctccaggaccccatc
tggctcctgatggccaacaccgacgacaaggtcatgatgacgtatcagctgccagtcagg
gacatggagacagtgctgcgagaggaccgcgaggccttgaggagcatgcagaaacatcag
cctcggttctcagaggagcagaagagggagctgagccaggtccacccctggatccgcaca
ggacgcctgccacgagccatcaacatctctggctgcacgggctgcaaagttcccccctcc
gtggcaccggccacaccgttcgacttggagatggagctgtgcagtgagcagaaggctcag
gagggcagcgccggcaggggcaagaaaaacctctcagagacccccatggatgagactcgc
cctgaggttaaagaagaggaggagaaaggaaccaaaaggcaaaaaggcagccatgacatg
atggcagaggagcagacagcgtgctcacaggctgcggagtctgccatgagtcattga

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