Hippoglossus stenolepis (Pacific halibut): 118102290
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Entry
118102290 CDS
T08308
Symbol
ntn5
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hsp00536
]
118102290 (ntn5)
Glycosaminoglycan binding proteins [BR:
hsp00536
]
Heparan sulfate / Heparin
Axon guidance molecules
118102290 (ntn5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
118102290
NCBI-ProteinID:
XP_035004272
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All DBs
Position
23:5917373..5932496
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AA seq
834 aa
AA seq
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MMFLPFSPPPSTSFFPVFLLLLLFLPPSLVSSSLFHTPLSWTSPHDPCYHLDGRPRHCLS
EFINAAYGVPVNASHSLQGSDYDSNVTTLTDLHNPHNLTCWMAHRGTDIGEWEITVPLGR
RFEITYISLQFCHQGEPSDPISISILKSMDFGRTWRPMQHYSSNCLGNFGLPSQTVAQTR
HQETEPLCSDPRPLQKQRGGMVLAFSTLDGRPSSPDFDHSHALQDWVTATDIRVVFHQVS
KVAKTGGSDRADESKWRDSREDHRETGLLRSRSGHKGRAEDQVNKLNTDSALGFFDRETK
QSRNKGDKVDKHGRKGPGKGSGQDEDGHNVTSKEGVDIFGIDTLTSSKKGAKGRGRGHKK
ENDHWLPCPNGGCNWTVEGRSRGNKGRELRKRRNNNLNLRQGARSMQAAMPSVFNPPAHA
PLALSDLQVGGRCKCNGHASRCRRDDKGRAVCVCEHHTAGPDCDVCEDFHFDRPWHRATP
THPNPCVACECNGHSNKCRFSMEVFQQSGRRSGGVCQKCRHHTAGRHCQYCQNGYTRDHS
KPLDNRKACQPCHCHPLGAVGRWCNQTSGQCLCREGVTGLRCNRCAPGYKQGKSPLRPCI
RIQEVAPTPAYQPQYSIAEECVSYCQPSQVKVRMNLETYCLKDYVLKVQVRGMERSGPWW
QFSISVQTVFRTGSTSRVRRGPHSLWVPDRDLGCGCPALHVGRTYLLIGAEEGERGWGPE
ESRLVADRSTLALQWREHWSPKLRGFRGHDKRGRCPEKSPDSPRREQAKAQEGYIPPHLL
TEKDTDNVDTHSVKEDETRTLAEPHTHPPTEAESTETTPAPPTSALVCSTTHPE
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcctgcccttttcccctcccccctccacctctttcttccccgttttccttcta
ctcctcctcttcctccctccatccctcgtctcctcttcccttttccacaccccgttgagc
tggacttcgccgcacgacccctgctaccacctggacggccgtccgcgtcactgcctgtca
gagttcatcaacgccgcctacggggtcccggtcaacgccagtcactcactacaagggtct
gactatgacagcaatgtcaccaccttgacggacctccacaaccctcataacctcacctgc
tggatggctcacagaggcactgacatcggggaatgggagatcaccgttccactgggccgt
cgctttgagatcacctatataagtctgcagttctgccaccagggggaaccatcagatccc
atctccatctccatcctcaagtcgatggactttgggcgcacctggaggccgatgcagcac
tactccagcaactgcctcggaaactttgggctgccctcccagacggtggcccagaccagg
catcaggagacggagcccctctgctcagaccctcgccccctgcagaagcagaggggtggc
atggtgctggccttctccaccttggacgggcgaccatcctctcccgatttcgaccacagc
cacgccctccaggattgggtgacggccacagacatacgcgtcgtcttccatcaggtgtcc
aaagtcgccaagacgggtggctcggacagagcggacgaatcaaaatggcgcgacagtcga
gaggatcacagagaaactgggctgctgaggtcgagatcgggccacaagggccgtgctgaa
gatcaggtcaacaagctaaacacagatagtgcactgggattttttgacagggagacaaaa
caatcgaggaacaaaggagacaaagtggacaaacatggaaggaagggtcccggtaaaggg
tcaggtcaagatgaagatggacacaatgtgaccagcaaagaaggggtggacatttttggc
atagacacgctcacgtcttcaaagaaaggcgcgaaaggtagaggtcgcggccataagaaa
gagaatgaccactggctgccttgccccaatggcggctgtaattggacagtggaggggcgg
agcaggggcaacaaagggcgggaactgaggaagaggaggaacaataatttaaacctgaga
caaggtgccaggagtatgcaggcggccatgccctctgtttttaaccctcctgcccacgct
cccctggccctgtccgacctgcaggttggcggcaggtgcaaatgtaacggacacgcctct
cggtgccgccgggacgacaagggacgggcggtatgcgtgtgcgagcatcacacggcgggg
ccggactgtgacgtgtgtgaggacttccactttgacagaccatggcaccgagctacaccc
acgcacccaaacccctgtgtcgcctgtgagtgtaacggtcactcaaacaagtgccgcttc
agcatggaggtgttccagcagtcgggccggcgcagcggaggggtgtgtcagaagtgtcgg
caccacacggccggacgccactgccagtactgccagaatggatacacccgcgaccacagc
aagcctctggacaaccgcaaggcctgccaaccgtgtcattgccatcccctgggagcagtg
ggccgctggtgcaaccagacgtcaggtcagtgtctgtgtcgagaaggggtgaccggcctc
aggtgcaaccgctgcgccccgggctacaaacaagggaagtcccctctacggccctgcata
cgaattcaagaggtcgctccgaccccggcgtaccagcctcagtacagcatcgcggaggag
tgtgtttcatactgccagccgtctcaggttaaagtccggatgaacttagagacctattgt
ctcaaggactacgtgctgaaggtgcaggtgagggggatggagcgttcaggtccctggtgg
cagttctccatctcagtccaaaccgtcttccgcacgggctccacctcccgcgtccgcagg
ggcccccactccctgtgggtccccgaccgtgacctcggctgcggctgccccgccctccac
gtgggtcggacttacctcctgattggcgcggaggaaggagagcggggctggggcccggag
gagagtcgcctggtggcggaccgctccactctggccctccagtggcgggaacactggagc
cccaaactcaggggcttccgggggcacgacaagaggggacgctgccccgagaagtccccc
gacagcccgcgcagggagcaagcgaaagcacaggaagggtacatccccccccatctgctg
acggagaaagacacggacaatgtggacacacactctgtcaaagaagacgagactcgaacc
ttagcagagccgcacacacaccctcccacagaggctgaatccacagagacgaccccggcc
ccccccacctcggccctggtctgctccacgacacatcccgagtga
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