KEGG   Hippoglossus stenolepis (Pacific halibut): 118102405
Entry
118102405         CDS       T08308                                 
Symbol
rpgrip1
Name
(RefSeq) protein fantom isoform X1
  KO
K16550  protein fantom
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hsp01009]
    118102405 (rpgrip1)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:hsp03037]
    118102405 (rpgrip1)
Protein phosphatases and associated proteins [BR:hsp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118102405 (rpgrip1)
Cilium and associated proteins [BR:hsp03037]
 Primary cilia and associated proteins
  MKS complex
   118102405 (rpgrip1)
SSDB
Motif
Pfam: RPGR1_C C2-C2_1
Other DBs
NCBI-GeneID: 118102405
NCBI-ProteinID: XP_035004419
LinkDB
Position
23:10832832..10843178
AA seq 1362 aa
MSPVMDETAEDLPVRDVGLIRGGLMPTVPDTLRDVKLWKKHHVMKTKDPQRLFRFPREHL
EDLCLRLQEENSVLRQHTRTQEQRLRRMSTRLMRLRQARPGSTGVKERDMEDTIQELEAH
VAMLESQKGLLQNKLSLAKQHIMDLGGRTPYKFSKGKNMEVEGPVRRAAQTAPPRYGPMV
DDSRAEVERFRSSVTEQVRVAEMELTAQSLRDTLREKEKEIEGTVKEMRKQQADTHRITI
RENVDLIRLQNQLSNKSTALRVTQEKFNDLQEAYENQLDESHRSLRESQGALLEKVEELT
EQLKQEKQRALALQGQFNTATLSLQNLDKLQERITDLEGERDMIKENYDTLLESTLSAQS
NHDGHVEERSVVDHKSEDVGPNVCRLDIQRLEEALRAEREERGRLELEKEKLRQEKKMLE
EHRERDREFPVMTGDKREHLERELLQYREQVSALQDRLDSVTKVFDMSVEELSDTLLQIK
AFRMQQESRESLRFLWADGKVEDLPREMVNIQATHAETVLELQKTRNLLLLEHQISNDLK
EELNTVGQRMEREREESRSRMAEKVKLLSKRALQINTLQAQLKELAYSPRNYKRTIPMQY
TWPAGDQEVVQPIEDDMCFSQLRAGESLLEIHLKAATYTPAGQRIMSRLSAGTGISEDIV
TFCTYGLLDFEVHSTPLVSGSQPNYGFTSRYALTARDLGRLGGQGSRVRVELHQALGGVK
FVTHGSGQMSLMGTMERRGQRVSGRFNITGSEAEIVGVVDFWVRLFPPAEPICIEVEQPG
ERRTATQRSPVHYSYGWQETCSEEIHDYGGGIPNELVVMLERCVGLNARWPGLLPDAYVT
YRFYDLPPHVSQTVQCAADPVFNDKTSYPLAVTADVLHYLRSSSLWVYLFDDGDDQMPPT
YLAKTPIPLRALATGREIRGDYVLRDPAGGPRGMVRIMIKWKYPFLPTADDSLVKQGRQN
RATESTGTEERRREEEESQKPIAKPRVKTQLLAARETKAVQRETKTWPMPPAVKLKSSKN
TRPEPNTSVKPLDTRQSRDRKRSTKRSTAHLTPESKPSHLPSRTSSEGRSPRQSPATLSR
ESSASAVRTQDLLSVDQVSEDEEEGRSESAAAGESDVPKSSESSSSLSDMIIIPPKRKIR
KREKLRVEILSLMFEPSSHVALDKSVQRVYVEYRLLGVPIETTETPMSLRKPTKGEEVHY
NFTRVIYVDGSRSAPLRQYLYTMLEGTDPNQGRLKFTVVSEPMDDDDEEECVDVGHASLD
LQELLLTGNDVLEQEIDILSLDEDKEVIGNLKVSLEAAKALTGIYQEFHKEDETKKEDET
DEEEEEEEEEEKEEEEKKEEEQEEGKKKDQIQVLDYDEDSDF
NT seq 4089 nt   +upstreamnt  +downstreamnt
atgtcacctgtcatggacgagacggccgaggatctcccagtcagagatgtggggctaatc
aggggggggctcatgccaactgtcccagatactcttcgtgatgtgaaactgtggaagaag
catcatgttatgaagacaaaagatcctcaacgcctgtttcggtttcccagagagcacctg
gaggacctgtgtctgcggctgcaggaggagaacagtgtgctgaggcaacacacgcgtaca
caggaacagaggctgcgcaggatgtccaccaggctaatgcgtcttcgtcaggcccgtcct
gggtccaccggtgtgaaggagagagacatggaggacaccatacaggagctggaagcacat
gtggctatgctggagagccagaaagggttgctacagaacaaactcagcttggccaagcag
cacattatggacctggggggacgcacaccatacaagttcagcaaaggtaaaaatatggaa
gtggagggcccagtcaggagggcagcccagacagccccgccccgctatggccccatggtg
gatgacagcagggcggaggtggagagattcaggtccagtgtgacagagcaggtgagggtg
gccgagatggagctgactgcccagtccctcagagacacactgagagagaaggagaaggag
atcgagggaaccgtgaaagagatgaggaagcagcaggccgacacacacagaataactatc
agagagaacgtggatctgattcgtctccaaaatcagctctcaaacaagagcacagctctg
cgagttacgcaggagaagttcaacgacctgcaagaagcatatgagaatcagctagatgag
agtcacaggtcgctgagggaaagccagggagctctgctggagaaagtggaggagctgaca
gaacagctgaagcaggagaaacaaagagcgctggcactgcagggacagtttaacacagct
accctgtctctacagaacctggacaagctacaggagaggataacagacctggaaggagag
agggacatgataaaagaaaactatgacactctcctagagagtactttgtctgcccaaagc
aaccacgatggccacgtggaagagcgtagcgtagtggaccacaagagtgaggacgtgggg
ccaaacgtgtgcaggctggatatccagaggctggaggaggcactgagagcagagagggag
gagagaggcagactggagctggagaaagagaaactgagacaagagaagaagatgttagaa
gagcacagagagcgggacagagagtttccagtgatgacaggagacaaacgtgagcatcta
gagcgggagcttctccagtacagagagcaggtctccgctctgcaggacagactggactct
gtaactaaggtgtttgacatgagtgtcgaggagctcagtgacactcttttgcagatcaag
gcattcaggatgcagcaggagagcagggagagtctgcgtttcctctgggctgatgggaag
gtagaggatttgccccgtgaaatggtaaatatccaggcaacacatgctgagactgtgctg
gagctacagaaaaccagaaacctgctactgctggagcatcaaatcagtaacgacctgaag
gaagagttaaacacagttggccagaggatggagagagaaagggaggagagcaggagtagg
atggcagagaaagtcaagcttttatccaaacgagcccttcagatcaacactttgcaagcc
cagttgaaagagctagcatacagccccaggaactataaacggaccataccaatgcagtac
acctggccagctggagaccaggaggtggtacagcccattgaagacgacatgtgtttttct
cagctgagagcaggggagtcactgctagagatccaccttaaggctgccacttacacacca
gcagggcagcggattatgagcaggctcagtgcaggaacgggcatcagcgaggacatcgtg
accttctgcacctacggcctcttggactttgaggtgcactccactcccctcgtgtcaggc
agtcagcccaactacggcttcacgtcccggtacgctctaacagcccgcgatctgggcagg
ctgggaggtcaggggtcaagggtcagagtggagctccaccaggcgttaggaggggtcaag
tttgtgactcatggaagtgggcagatgtcgctcatgggcaccatggagaggagagggcag
cgtgtcagtggacgtttcaatatcacaggctctgaagctgaaattgtgggtgtggtggat
ttctgggtgcgtctgttccctcctgcagagcccatttgcattgaggtagagcaaccaggt
gaaaggagaacagcgacacagaggagtcctgtgcattactcttatggctggcaagagaca
tgttccgaggagatacatgactacggcggagggatccccaatgagttggtggtgatgttg
gagcgctgtgtgggcctcaatgctcgttggccaggactacttcctgacgcctacgtgact
tacaggttctacgacctgccgcctcacgtctctcaaacggtccagtgcgctgctgacccg
gtgttcaatgacaaaaccagctacccactggcagtaacagctgatgtgttgcactacttg
aggtcaagtagtctttgggtgtacttgtttgatgatggtgatgaccaaatgccaccaact
tatctggccaagacccccatcccactgcgagccctggctacaggcagggagatcagaggt
gactatgttctgagggatccagctgggggacctcggggcatggtcaggatcatgataaaa
tggaagtaccccttcctgccaacggcagacgactcgctggttaaacagggaagacagaac
agggcgacagaaagcactgggacggaggagaggaggagagaagaggaggagtcacagaag
cccatagccaagcccagagtgaagactcagctactcgctgcaagagaaaccaaagcagtg
caaagggagacaaaaacctggcctatgcctccagctgtcaaactgaaaagctcaaagaac
acacgacctgagccaaacacctctgtgaaacctctggacacccgtcagtccagagacagg
aagagatccaccaagaggtcaactgcccatcttacgcctgagtcaaaaccctctcatttg
ccatctcggacctcctcagagggaaggtctcccaggcaatcacctgccactctgtcaagg
gaaagctccgctagtgctgtcaggactcaggacctcctctctgtggatcaggtgtcagag
gatgaagaggagggaaggagtgagagtgctgctgcaggagagagtgatgtccctaagtct
tcagagtcaagctcctccctaagcgacatgatcatcattcctcctaaacggaaaataaga
aagagagaaaagttgagagtcgagatcctgtccttgatgtttgaaccgtcctcacatgtg
gccctggacaagtcggtgcagcgtgtgtacgtggaatatcggctgctgggcgtccccata
gagacgacagaaacgcctatgtccctccgcaaacccacaaagggagaggaggttcactac
aacttcacacgagtgatctacgtggacggatcgcggtcggctccactcagacagtatctc
tacaccatgctggagggcactgaccccaaccagggcaggttgaagttcacagtcgtcagt
gagccgatggatgatgatgatgaggaggagtgtgtggacgtgggacacgcgtctctcgac
ctacaagaactgctgctcacaggaaatgatgtcctcgaacaagagattgacatcttgagt
ctagatgaggacaaggaggtgataggaaatctgaaagtgtctcttgaagcagcaaaagct
ctgaccgggatataccaggagtttcacaaggaagatgagaccaagaaagaagacgaaaca
gatgaagaagaagaagaagaagaagaagaagaaaaagaagaagaggagaagaaagaagag
gagcaagaggaagggaagaaaaaagatcagatacaagtgctggattatgatgaggacagt
gatttctaa

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