Hippoglossus stenolepis (Pacific halibut): 118102406
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Entry
118102406 CDS
T08308
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04814
Motor proteins
hsp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118102406
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118102406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118102406
03036 Chromosome and associated proteins [BR:
hsp03036
]
118102406
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118102406
Membrane trafficking [BR:
hsp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
118102406
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
118102406
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
118102406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
RTBV_P46
DUF7259
Lipase_GDSL_2
Motif
Other DBs
NCBI-GeneID:
118102406
NCBI-ProteinID:
XP_035004422
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All DBs
Position
23:complement(10850329..10862745)
Genome browser
AA seq
1276 aa
AA seq
DB search
MSSAGTVESGKPPKIGSTVEVTGKGQRGTVAYIGATLFASGKWVGVVLDEPKGKNDGTVQ
GKRYFTCEENHGIFVRQSQIQVVEDGSSATSPDTPEFVLAKILKQKDIPETPKTSKLQTP
MNVKKSSTRRSAKWSTPRLTPATSLPSLLVRSAGRPNLPLTTSRESLSSSLSGDVSEVGV
SSHQGALGAPIVPQPSGSPAPVASPVPATPSKAEPPISKQEEESLRGQVKDLDEKLETLK
MKRTEDKAKLKELEKHKIQLEQLQEWKIKMQEQQTDLQKQLKEAKKEARDAQESKDHYME
EMSDTADAIEMATLDKEMAEERAESLQVEVDSLKEKVDELSMDLEILRHEISEKGSDGAA
SSYHVKQLEEQNSRLKEALVRMRDLSSSEKQEHVKLQKQMEKKSTELDTLRTQKEKLQEE
VKHAEATIDELKEQVDAALGSEEMVETLTERNLDLEEKVRELRETVTDLEAINEMNDELQ
ENGRETEMELREQLDMGGAKVREAEKRVEAAQETVADYQQTISKYRDLTTRLQDANRDLI
NQQNANAEQVQQPPAELFDFKIKFAETKAYAKAIEMELRKMEVAQSNRQVSLLTSFMPDS
FLRHGGDHDCILVLLLIPRLICKAELLSKQAQEKFDLNGNLAQGAGLRGPPGEQRSFASG
LVYSLSLLQATLHKYEQALNTCNVEVFKRMGTLYSEMNFHERSLDYFIDLLHKDQLDETV
QVEPLTKAIKYYQQLYSVHLADHTEDCTVQLADHIKFTQNALDSMGVEVARLRAFLAAGQ
ESSGLAVLLKDLDTSGSDIRQFCKKIRRRMPGTDVVGVPAALNFGPQVAETLTECRRQLT
RVVAVLQEVAAAGAQMVAPLAEQEGVNALKLEDIACNAVDQVYGSHGLSGPECLRQSCSS
VIATMNKMATAMQEGEYDADKPQGKTPPVEMRAATVRAEMTDAEGLGVKLEDRETVNKEV
KKSLKIKGEELSEANVRLSLLEKKLDTSTKDADERVEKIQTKLSDNLSLLKKKEKEFEET
MDALQADIDQLEAEKAELKQRINNQSKMTIEGLRGPPASGIASIVQGSAGAGVALSMAGP
VEVVDSPLLRQQVEAQRLGIKHLKNENNRLKAEKMRAQLASLPPLRPPKLPQVSKESSMP
PEGLNTGIYRRTDQLLATLLKLSAEFKVVDITGKTTVSASAQLLEQTSRLQNLSDALDKL
KGEVAEHVVTHHRGAKASSDFATFPVSSFVKAKEEKQGNTVLVGRVSIPCTRGHEQVHRL
VLSQQQLQQVHSLLMV
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgcaggaacagtggagagtggtaaacctccaaagattggctctacagtagag
gtgacagggaagggtcaacgcggcactgtcgcctacatcggcgccaccctctttgcctct
gggaaatgggtgggtgttgtacttgatgagcctaaaggcaagaacgatggcaccgtgcag
gggaaacgctacttcacctgtgaggaaaatcatgggatatttgtcagacagtctcagatt
caggtggtggaagatggctccagtgccacctcaccagatactcctgagtttgttcttgcc
aagattctcaaacaaaaagacattccagagactccaaaaacatccaaactgcagacacca
atgaatgttaagaagtcttctacccgccgctctgccaagtggagcacgccacgtctcaca
cctgccacctccctcccctccctcttggtacgctccgccggccgccccaacctgccactg
acgacgtctcgtgagagtctgtcgtcctcgttgtctggcgatgtcagtgaggttggagtg
tcctcccaccagggtgcactgggagctcccatcgtgcctcagcccagcgggtcacctgcg
ccagtcgcatccccagtcccagctactccgagcaaggcggaacctcccatttccaaacag
gaggaggaatcactgcgaggtcaggtcaaagacctggacgagaagctggagacgctgaag
atgaagaggacagaggacaaggccaaactgaaggagctagaaaaacacaagatccagctg
gagcagcttcaggaatggaagataaaaatgcaggagcagcagaccgacctccagaaacag
cttaaagaagccaagaaggaagcccgtgatgcacaggaatccaaggaccactacatggag
gagatgtcagacacggccgacgccattgagatggcaacactggacaaagagatggcggag
gagcgagcggagtcattgcaggtggaggtggacagtctgaaagagaaagtggatgagctc
tccatggacctggagattcttagacatgagatttcagagaaaggctcagacggagctgcc
tcaagttaccatgtcaaacagctggaggagcagaacagcagactgaaggaggctctagtc
aggatgcgtgacctgtcttcttcagagaaacaggaacatgtgaagctgcagaagcagatg
gagaagaagagcactgagctggacactctgaggactcagaaggaaaaactgcaggaagaa
gtcaagcacgcagaggccactattgatgaactgaaggagcaggtggatgctgctctgggc
tcagaggagatggttgagacgcttacagagaggaaccttgacttggaggagaaagtcaga
gagctgagagaaacagtcaccgatctggaggcgatcaacgagatgaatgatgagctccag
gagaatggaagggagactgaaatggagctgagagagcagctcgacatgggtggtgcaaag
gtcagagaagctgaaaaacgagtggaggctgctcaggagactgtggctgattaccagcag
accatcagcaaatacagagatctcactaccaggctgcaggatgccaatagggacctgatc
aaccagcagaatgccaacgctgaacaagttcagcagccgcccgcagaactgtttgacttc
aagatcaagtttgcagagaccaaggcctatgccaaggccattgagatggagctgaggaaa
atggaagtggctcagtccaacagacaggtgtccctcctcacctccttcatgccagactcc
tttctccgtcatggtggagatcatgactgtattctggtccttcttctcatccccaggctc
atctgcaaggctgagctcctcagtaaacaagcccaggagaagtttgacttgaatgggaac
ctggcgcagggggcagggctcagagggcctccaggagaacagcgcagctttgcctcaggg
ctggtgtactccctcagcttgctgcaggccactctgcacaaatatgaacaggctctgaac
acctgcaacgtagaggttttcaagcgcatgggtacactttactctgaaatgaatttccat
gagcgctccctggattatttcatcgacctgctgcataaagaccaattagatgagactgtt
caggtggagcccctgaccaaagccatcaagtactaccagcaactgtacagcgtccatctg
gcagatcacactgaggactgcacagtgcagctggctgaccacatcaagtttacccagaat
gcattggactccatgggagtggaggtggctcgtctgcgggcgttcctggctgcaggtcag
gagagctctggccttgctgtgcttctgaaggacctggacacttcgggctcggatatcaga
cagttctgtaagaagatccgccgtcgcatgcctggaacagatgtggttggagtacctgct
gctctcaattttggaccacaggtggcagagacgctgacagagtgtaggcgccagctgacc
cgtgtggtggccgtgctgcaggaggtggctgcggctggggctcagatggttgctccgctg
gcagaacaggagggtgtcaacgctctcaagctggaggatattgcctgcaacgctgtggat
caggtgtatggctcccatggcctgagtggcccagagtgtctgcgtcagtcctgcagctct
gtcattgctaccatgaacaagatggctacggccatgcaggagggagagtatgatgctgac
aaacctcagggcaagactcctcctgtggaaatgagagctgccaccgtcagggctgagatg
actgacgctgagggtctaggtgttaaactagaagacagagagacggtcaacaaggaggtc
aagaagtctcttaagatcaagggtgaggagctgagtgaagccaatgtccgcctcagtctg
ctggagaaaaagctggacacctccaccaaagacgcagatgagcgggtggagaagatccag
accaaactcagcgataatctctccctgctgaagaagaaagagaaggagtttgaggagacg
atggatgctctgcaggctgatatcgaccagctggaggccgagaaggcagagctgaagcaa
cgcatcaataaccaatcgaagatgaccattgaaggccttagaggcccgcctgcctctgga
atcgcctctattgttcagggatctgcaggagcaggtgtggctctatccatggcggggcca
gtagaggtggttgactctcccctcctccggcagcaggtcgaggctcagagactgggcatt
aaacacctcaagaatgaaaacaacagactcaaggccgagaagatgagagcccagctggcc
tccctgcctccactccgcccccccaaactgccacaagtgtccaaagaaagctccatgccg
ccagagggactgaacacaggcatctatcgcaggactgaccaactgctggcgacgctgctc
aagctgagtgcagagtttaaagtggtggacatcactgggaagacaacagttagtgccagt
gcccagctgctggagcagacgtctcgactgcagaacctcagtgatgctctggacaaactc
aagggagaagtagctgaacacgtggtcacgcatcaccgtggagcaaaggcttcctctgac
ttcgccaccttcccggtgtcatcctttgttaaggccaaggaagaaaagcaggggaatacg
gtgcttgtgggtcgtgtttccattccatgcacccgcgggcacgaacaagtccaccgcctc
gtcctctcacagcagcagctgcagcaagtgcacagcctcctcatggtgtaa
DBGET
integrated database retrieval system
