Hippoglossus stenolepis (Pacific halibut): 118102509
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Entry
118102509 CDS
T08308
Symbol
si:dkey-185m8.2
Name
(RefSeq) trichohyalin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
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Gene cluster
GFIT
Motif
Pfam:
AIG1
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
118102509
NCBI-ProteinID:
XP_035004638
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Position
23:4034928..4041669
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AA seq
1960 aa
AA seq
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MDTADENCSLIAVPNGAYPVHCTEEVLLPFFSDESLPAAMASHLPPALPELRLVLLGRKG
AGKSAAGNTVLGGVGGFESGRPTEECVKSRADVAGRRVTVVDTPGWEWYYPLNSTPNWVR
RETLRSVSLCPPGPHAVLLVVRSCASVTDAYIQEMEEHLEPLGSGVWDHTMLLFTRGDEL
GLTTMEQRIVTSGPALQRLLQKCGNRYHVVNNLRKADGTQQVQELIRKLEQMVEEKKDGN
SHLEMDSSVLLGLEADGKRRARERRKKQRQMEAQMQRGTIKAALMSDGPQGSELDAHHSF
SKAPRRLQEVRLVLLGERETGKSSAGNTILGQTGFFQAGGVTEECSRRQAEVAKRLVTVV
DTPGWEAGVAGATPERMRREIINGVALCPPGPHALLLTLRVDTLVSAGHVREHLELLGEG
VWRHTILLFTHGDQLRQGVDFEQHIQGGGRDLQWLMEKCRGRYHVISSADGGSGGSTTVT
ELLEKVEKMATMNRCEAFSSLVQDVRDLSRQRNEKFNQRLKEMGDKMLRQELELKNVRER
EMKSIRWFFDWKRKVKSPGKANVQREEEEEEEEDRRMGERKQDFGELEERMRWLTEDKER
EVQDLSVENERNRVALNQSGRERDEAMLNLERKEIEVEELRERIDEQQAKLLDLERAGVD
NEQERKRREDTIRAKEQEWRKKLEETVERHKREEAEWTEQVESFKAEMDETKQHCDNVLE
RKEREVTKLEEKLKREMEVKLFERDKEEEALRKKAAEEKRFTLDAATLQHQEMTRKISEL
EVKHQEQIHQSVKEKADDMEKVREQHANEIRDMNEETRREIENLKKHFAKENEEHVKAKK
QEIEELEQKYHKQIREKLRENEKERETITLNHKKDVTQKIQEKDKEMEALKRQHQEEIND
MRKLMEATRAEQQREIDRKVKEKEEDVERVQQQCEEKLRDMEEERKRENEEQREKFAKES
GKQMQERERQIRELQLKFSAQIEEREIMNQENEKCLLEKLQERDELKRQHLSQVEEKVRE
SEKEKERFEKEMEKRVEEKEKEIEETKLNVGELKTKLQQEKEKEIDYLNYKKEIEQGMRE
KEKEIEAMELNVNEMKEKLQQRQEKETSYKKELEERLEEKDREIEEMREHSKRKEEKRER
VQLNQKRLTMQKLEENERVIEKLNEHIKDIEEIVQRKDEESVKMILNQQEEAEQRLQDRG
RRTEEMKLQLLNEMERKLKEKETEIESMRQEADSRETRWREDQETRENEMKKLMEILEKK
TEEITETQSLLAQRHREVDEVLEKLQEKEEALERLRQKDGGNEKEIVQLKLTIEQTKSEL
KNLTDKMEKEMMSLIQEYEKEIARRDENVESISKDKDEAVARLEEESQRSVVAVTEKYEE
LQEQSEKMRKEADNFKFKYEELRREKEEEVRKHQRGYEEIQSILKERDLEVRALTDASEK
LETERELREHFERQMMERESEWRKKEEEMEEKLLKREREVEEREEDTRRNEEELSKRRLG
LGAKEGELEQGLRKLEVNLVMQRKERNQYEQGLKLRTETIERKEREIESLLRALEVKQQE
LSSHGQDLQKNVKRLKDQGKELKDREHYLNNEERELLNWKSELQKQNEHVDSTTQQLSEM
GRDLALLKDELHKKEKNLKTALKKWSKWEADLEAREAELHERNLEGGQGPDAAVESSENN
VFVMCREVSERRAKGRAAVQGESTKEREDQTTKTAQSAAESNNCHHETLEEIEMGEEKEG
MRGRGGEMEEEKGLERKQVVQGQRLSSHNSTASPGLHLRVLVLGESWSSRCPAGVTILGG
EVPKPDGSTFRSWRGQTAGRRLAVAEPLGLRWRDGSDPTDLKKSLLDGVSWCHPGPHVVL
LLMPVFLACTRKYRRAVEEDMGLLGEGIWQRTLVVFTWGETLGVSAEQHILRSGELTGLV
EKCGGRFHVLTSKRTNPETEGLFEKMEDIVASNSRGQCLV
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atggataccgcagatgagaactgcagtctaatcgctgtgccgaatggtgcttatccggtg
cactgcactgaggaagtccttctccccttcttctcagatgagagtctgccggctgccatg
gcctcacacctgcctccagctctcccagaacttagactggtcctgctgggcaggaaagga
gcggggaagagcgcggcgggcaacaccgtcctgggaggagtgggaggctttgagagcggg
aggcccacggaggagtgtgtgaaaagtcgagcagatgtggcggggaggagagtcacggtg
gtggacacccctgggtgggagtggtactaccctctcaacagtacccccaactgggtgagg
agggaaaccctgcggagcgtgtcgctgtgtcctcctggaccccacgctgtgctcctggtg
gttcggtcctgtgcctcagtgactgacgcctacatccaggagatggaggagcacctggag
cctctgggaagtggagtttgggatcacaccatgctgctgttcaccaggggagacgaactg
ggcctgaccaccatggagcaacggatcgtgacgagcggaccggcgcttcagaggctcctc
cagaagtgtgggaacagatatcatgtcgtgaacaatctgaggaaagctgatgggacgcag
caggttcaagagctgataaggaagctggagcagatggtggaggagaagaaagacgggaac
agtcatctggagatggatagttcggttctgttgggtttggaagcagacgggaagaggaga
gccagagagaggaggaagaagcagaggcagatggaggcacagatgcagagaggaaccatc
aaagctgctctgatgagtgatggtcctcagggttccgagcttgacgctcatcactctttc
tccaaagctcccagacgtttacaagaggtcaggctggttctcctgggggagcgtgaaacc
ggaaagagttctgctgggaatactatcctcggccaaacaggcttcttccaagcagggggg
gtaacagaggagtgcagccgtcgacaagcagaggtggccaagcggctagtgacggtggtg
gacacaccgggctgggaggccggtgtggcgggggcgacgccggagaggatgaggagggaa
atcatcaatggcgtggcgttgtgtccgccggggccccacgcactcctgctgacgctgaga
gtggacacactggtgagtgcgggacatgtgagggaacacctggagctgctgggcgagggc
gtatggagacacacaatcctgctgttcacccacggcgatcagctccgacagggggtggat
tttgagcagcacatccagggtgggggcagggacctgcagtggctgatggagaaatgcagg
ggcaggtaccatgtcatcagcagtgcagacggaggaagtggaggctccactacggtgaca
gagctcctggagaaagtggaaaagatggcgacaatgaacaggtgcgaggctttctcaagt
ctggttcaggacgtcagagacctgagtcgtcaaaggaacgaaaagttcaaccagcgcctg
aaggagatgggagataagatgcttcgtcaggagctggagctgaagaacgtgagggagagg
gagatgaagagcatcaggtggttctttgattggaagaggaaggtgaaatcgcccgggaag
gccaacgttcaaagggaagaggaggaggaggaggaggaggacaggaggatgggtgaaagg
aagcaggacttcggagagctggaggagaggatgcgatggctgacggaggataaagagaga
gaagtacaggatctgagcgtagaaaatgagagaaaccgcgtcgcgctgaaccaaagtgga
cgagagagagacgaggcgatgcttaacctggagcggaaagagatagaggtcgaggagctg
agagaaagaatcgacgagcagcaagcgaagttgcttgaccttgaacgtgccggtgtggat
aatgaacaagagagaaagaggagggaggacaccattagagcgaaggagcaagagtggaga
aagaaactggaggaaactgtggagcggcacaagagagaagaagcagagtggacggaacaa
gtcgaatctttcaaagcagaaatggacgagacaaaacaacactgtgacaatgttctcgag
agaaaagagagggaggtgacaaagctggaagagaaactaaaaagagagatggaagtaaaa
ctgtttgaaagagataaagaggaggaggcactgaggaagaaagctgcagaggaaaaacgg
ttcaccctcgatgcagcaacactgcagcatcaggagatgacgaggaaaatcagtgaatta
gaagttaaacaccaagaacaaattcatcagagtgtgaaagaaaaggcagatgatatggaa
aaggtcagagaacagcatgcaaatgaaataagagacatgaatgaagaaacccgcagagaa
atcgaaaatctgaaaaagcattttgcaaaagaaaatgaggaacatgtgaaagcaaaaaag
caggagatagaagagctggaacagaagtatcacaaacaaataagagaaaaactgcgagaa
aatgaaaaagagagagaaacgattactttaaatcacaagaaagacgtgacgcaaaagatt
caagagaaagacaaagaaatggaagctttaaaacggcagcatcaggaagaaattaacgac
atgagaaaactaatggaggcgacgagggcagaacaacagagagagatagatagaaaagtg
aaagaaaaagaggaggatgtagaaagagtgcaacagcagtgcgaggaaaaactaagagac
atggaggaagaaagaaaaagagaaaatgaagagcagagagaaaagtttgcaaaagaaagt
gggaaacaaatgcaggagagagaaaggcagatcagagagttacaactaaagttttctgcc
caaatagaagagagggaaataatgaatcaagaaaatgaaaagtgccttttagaaaaattg
caagagagagacgagttaaaacgacaacacttgagccaagtcgaagaaaaggtgcgagag
agtgaaaaggaaaaagagagattcgagaaagagatggagaaaagggtggaagaaaaagaa
aaggagattgaagagacgaaactgaatgtaggggaactcaagactaagctgcaacaagag
aaagagaaagaaatagattatttaaattacaagaaagagatagaacaaggaatgagagaa
aaagagaaagaaattgaggcaatggaactgaatgttaatgaaatgaaggagaaactgcag
caaaggcaggagaaagaaacaagttacaagaaagaactggaggaaagacttgaagaaaaa
gacagagaaatagaagagatgagagaacattcaaaacgaaaagaagaaaagagagagagg
gttcagttgaatcaaaagagactgacgatgcaaaaactggaagaaaatgaacgagtgata
gaaaagttgaacgagcacataaaggacatcgaagaaatcgtgcaaagaaaagacgaagag
agtgtgaagatgattctaaaccaacaggaagaggcagagcagcgactgcaggacagaggg
agacggacggaggagatgaaactacagcttttaaatgaaatggagagaaagttaaaagag
aaggagacagagattgaaagcatgagacaggaggcagactcaagggagacgagatggagg
gaggaccaggagacgagggagaatgagatgaagaagctgatggagatcctcgagaagaag
acagaggaaataacagaaacacagagtcttcttgcacagagacacagggaggtggacgag
gtgttggagaagctgcaggagaaagaggaggcactcgagcggttgaggcaaaaggatgga
ggcaacgagaaggagatcgtccagctgaagctcacgatcgagcaaacgaagtcagagctg
aagaatctcacagacaagatggagaaggagatgatgagcttgattcaggaatatgaaaag
gagatcgcaagaagagacgagaacgtagaatcgatatccaaggacaaggacgaggctgtg
gctcgtctggaggaagaaagccagcgaagcgttgtggccgtcacagagaaatacgaggag
ctgcaggagcaaagcgagaagatgagaaaggaggcggacaatttcaaatttaagtatgag
gagctgaggagggagaaggaagaagaggttaggaaacatcagaggggatacgaggaaatc
caaagcattcttaaagagagagatctggaggtcagggcgttaactgacgcaagtgagaag
ctggagacggagagggagctgagagagcattttgagagacagatgatggagagagaaagt
gagtggagaaagaaggaagaggagatggaagagaaattgctgaaaagggaaagggaggtc
gaggaaagggaagaggacacgaggagaaatgaggaagagttgagcaagagacgacttgga
ttgggtgcgaaagagggagagcttgagcaagggcttcgaaaactggaagtgaatcttgtg
atgcaacgaaaagagcgtaatcaatacgagcaaggactgaaactgagaactgagactatc
gagagaaaggaacgggagatagaaagtttgctacgagctctggaagtcaaacagcaagag
ctgagcagccacggtcaagatcttcagaagaacgtaaagcgtcttaaagaccaagggaag
gagctgaaagacagagagcactatctaaacaatgaggagcgggagttgctcaattggaag
tctgagctgcagaagcaaaacgagcacgttgactctacaactcagcagctgtccgagatg
ggcagagatttggctttgctgaaagacgagctgcacaaaaaagagaagaatctaaagacg
gcgcttaaaaaatggagcaagtgggaagcagaccttgaagcgcgagaggcggagttgcac
gaaagaaacttagagggcggtcaaggtccggatgctgcggtcgagagttcggagaacaac
gtctttgtgatgtgccgagaggtcagcgagcgaagggcaaagggcagagcggcggttcaa
ggagagagcacaaaggaaagggaggatcagacaacgaaaacagcacagtcagctgcagag
agcaataactgtcaccatgaaacactagaagagatagagatgggagaggaaaaggaaggg
atgagaggaaggggaggagagatggaagaggaaaaaggcctggaaaggaaacaggtcgtt
cagggtcagaggttatctagtcacaacagcacagcctctcctgggttgcatctgagggtg
ctggtgctgggggagtcctggtcgtcacgctgcccagctggagtcaccatcctgggtgga
gaagtgcccaaaccagacggatccaccttcaggtcttggagaggtcagacagccgggaga
cgccttgctgtggcagagccgctgggtttgaggtggcgggacggatcggacccaacagac
ctaaagaaaagcctcctggacggcgtttcctggtgtcacccgggacctcacgtcgtcctc
ctgctcatgcccgtcttcttggcctgcacgaggaagtacaggagagctgtggaggaggac
atgggtttgctcggggaagggatctggcagcgcaccctggtggtgttcacgtggggggaa
actttaggggtgagcgcagagcagcacatcctgaggagcggggagctgacggggctcgtg
gagaaatgtggcggcaggtttcacgtgctgaccagcaagagaacaaaccctgagactgag
ggactgtttgagaagatggaggatatagtggcttcgaacagcagggggcagtgtttggtg
tag
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integrated database retrieval system
