Hippoglossus stenolepis (Pacific halibut): 118102570
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Entry
118102570 CDS
T08308
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X2
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118102570 (sorcs2)
Membrane trafficking [BR:
hsp04131
]
Protein recycling
Others
Others
118102570 (sorcs2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
InlK_D3
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
118102570
NCBI-ProteinID:
XP_035004738
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All DBs
Position
23:13424225..13714202
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AA seq
1152 aa
AA seq
DB search
MAPLRPKEPLSAAAHLCVFLLTTSAWMALPGPALCDSGALNRRGGLDRTFDTGVGDGGSP
PGFQRDGDEGSSPRFRRALSREKQMALLSSSFVLKGDATHNQAMVHWTGENSSVILILTK
YYHADSTKVLESSLWRSSDYGTTYTKLNLMPGTTIVVTSFYICPTNKKKVVLVGSSINER
DQMLFISTDEGSSFQRQSIAFTPDTIIFHPKEEDKLLAYCKEGRIFASTDLGRKWTLLQE
RVTKDRVFWSVSGVDVDPDLVHMEMQDTSGGYLYVTCLIQNCSDKMVTAQFLGKIDHNSL
LVQDDYIFVKVTTGNRTKHYVSYRRNEFVQMRFPKYALPKDVQIVSTDENQVFLALQEWY
QSDTYNLYQSDPQGVYYSIVLENVRSTKQPEENVLIDILEVRGIKGVFLANQKSNGKVTT
LITYNKGRSWEPLAPPTTDMNGKPVSCKAPECQLHLHLRWADNPYVSGTVHTKDSAPGLI
MGAGNLGSKLVEYKEEMYVTSDCGKTWRQVFEEEHHILYMDHGGVIVAIKDTSIPLKILK
FSIDEGQTWTVHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDFRQSFPR
QCTESDYDSWQLTDLQGEKCIMGQERSFRKRKDTAFCIKGKSYTSALITKPCQCTEKDFN
CDYGFERSHKEGDRCLSDFWHDPDSPPEDCHLGQTYESTTGYRKVISNVCEGGLNRQQSA
KQHNCPLLPPRGLRIGIKGQMLAVAPGDDITFIVHQEQGDTSSTKYQVDLGDGVRAIYQN
LTVTDEPIQHRYEKPGVYKVTVKAENMAGHDEATMYIQVTAPLQEVHLEVVPIAGRNHEV
NLTAIVLPTEANLTVFYWWIGDNLRPTLTLQNSLLTRFPETGEVSVTVQASNGRSMVQDT
RTVRVYDNFQVIPLSFSRNLDHFNPNIPEWREDIGQVVTKILAKITGVPQESLVTVVKPG
LPTTADLYVLPLSSKPAKKSMFVDKRIPAIMQAFNDNNVSFVVRGGLQVLVMLADPNAGL
IANDSTATAAETGYHGAAGGPGVWALAVIFLISIIATGSFILYKFKSPWIRTEDAYPPLF
FRKLPGNRNVYAQMHNEKEQEMTSPVNHSEDTQHIIQGEEFIDDDLDSQTLGNAGGSPAF
RSLIRTTTNHCY
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggcacctctgcgccccaaagagccgctctctgccgctgcgcacctctgcgtctttctg
ttgaccacctcggcctggatggcactgccgggacccgcgctctgtgacagcggggcttta
aaccgacgcggcgggctggaccgtacgtttgacacgggcgtcggagacggaggctccccg
ccgggcttccagagggacggtgacgaggggagctcgccccgcttcaggagagcactatcc
cgggaaaaacaaatggcactgctcagcagctccttcgtgctcaaaggggatgcgacccac
aaccaggcgatggtccactggacaggagagaacagcagcgtcatcctgatcctgaccaag
tattaccacgctgactccaccaaggtcctggagagctcgctgtggaggtcttctgactat
ggcaccacctacaccaaactcaacctgatgccagggacgaccattgtggtgaccagtttc
tacatctgcccgaccaacaagaaaaaggtagtgctggtgggctcatccatcaacgaacgg
gatcagatgctgttcatcagcaccgacgaaggttcctctttccagcgacagtccatcgct
ttcacccccgacacgatcatcttccaccccaaggaagaggacaagctcctcgcctactgc
aaggagggcaggatctttgcttcgaccgacctgggccgcaagtggactttgcttcaggag
cgtgtgaccaaggacagagtcttctggtctgtatctggtgtggatgtggaccctgatctg
gtgcacatggaaatgcaagatacaagtggaggttacctgtacgtcacgtgtctcatccag
aactgctcagacaagatggtgacggctcagttcctcggcaaaatcgaccacaattcgctg
ttggtgcaggacgactacatatttgtcaaggtgaccacagggaatcgtaccaagcactat
gtgtcctatcggcgcaacgagtttgtccagatgaggtttcccaagtatgccttgccaaag
gatgttcagatagtgagtacggacgagaaccaggtcttcctcgccctccaggagtggtac
cagtcagacacctataacctgtaccagtcggacccccagggtgtctactactccatcgtg
ctggaaaatgttcgcagcaccaagcagccggaggagaacgtcctcatcgacatcctggag
gtgcgtggaatcaaaggggtctttctggccaatcagaagagcaatggcaaagtgacgact
ctcatcacctataacaaaggacgaagctgggagcccctggccccgcctaccactgacatg
aatggaaagccggttagctgcaaagcacccgagtgtcaactccacctgcacctgcgctgg
gccgacaacccctacgtgtctgggactgtccacaccaaagactctgctccaggtctcatc
atgggagccggtaaccttggctccaagttagtcgagtacaaggaagagatgtacgtcact
tcagactgtgggaagacatggagacaggtgtttgaggaggagcatcacatcctgtacatg
gaccacggtggagtcattgttgccatcaaggacacttctatccccctcaagatactcaag
ttcagtatcgatgaaggacagacgtggaccgttcacaacttcaccagcacctctgtgttc
gttgacggactcctgagcgagccaggagacgagaccctggttatgaccgtgtttggccac
atcagctacaggtcggactgggagctggtcaaagtggacttcaggcagtcttttccccgt
cagtgtacagagtctgactatgactcctggcagctcacagacctgcagggagagaagtgc
attatgggccaggagcggagtttcaggaagagaaaggacaccgcgttctgcatcaaagga
aagagctacacctctgctctcatcaccaaaccctgtcaatgcacagagaaagacttcaac
tgtgactacggttttgagaggtcccacaaagagggcgatcgctgcttatctgacttctgg
catgacccagactcaccccctgaagactgccatctaggacagacctacgagtccaccact
ggctacaggaaggtgatatctaatgtgtgtgagggggggctaaaccggcagcagagtgcc
aaacagcacaactgccctctactgccccctagaggactacggatcggcatcaaagggcag
atgctggccgtggcacctggtgatgacatcacattcattgtccatcaggaacagggcgac
actagcagcaccaagtaccaggtggacctcggtgacggcgttcgggccatttaccagaac
ctgacggtgactgatgaacccattcagcatcgctacgaaaagcccggcgtctacaaggtc
acagtgaaggccgagaatatggcagggcacgacgaggccaccatgtacatccaggtcaca
gctcctctacaagaagtgcacctggaagtggttcccatcgctgggagaaaccatgaggtt
aatcttaccgccatagttcttcccactgaggccaacctgactgtcttctactggtggata
ggagacaacctgcggccgacgctgactctgcagaacagccttctgactcgtttccctgag
acaggagaggtttcagtcaccgtccaggcttccaacggccgatccatggtgcaggatacc
aggaccgtccgagtctacgataacttccaggtcatccctctgagcttcagcaggaatctg
gaccacttcaacccaaacatcccagagtggagagaggacattggccaggtggtcaccaaa
attctcgccaagatcacaggtgtccctcaggagtccctggttactgtggtgaagcccggc
ctccccaccaccgctgacctgtacgttctcccactgagcagcaaaccagccaagaagagc
atgtttgtagataagcgtattccggccatcatgcaggccttcaacgacaacaatgtcagc
tttgtggtgagaggaggtctacaagtgctggtgatgctagctgacccgaatgcaggtcta
attgctaatgactcaacagctacagcagcagagactggttaccacggagcagctggaggt
ccaggtgtttgggctctcgcagtcattttcctcattagcatcatcgccactggctctttc
atcttgtacaagttcaaaagtccttggattaggactgaggatgcctatcctccgctgttt
ttcaggaagcttccaggaaatcgcaatgtctacgcccagatgcacaatgagaaggagcag
gagatgacaagccctgtcaatcacagcgaggacacccagcacatcattcagggcgaggag
ttcattgatgacgacctggactctcagactctaggtaacgcaggaggtagccccgccttc
cgttcccttataaggactaccactaaccactgctactaa
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