Hippoglossus stenolepis (Pacific halibut): 118102603
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Entry
118102603 CDS
T08308
Symbol
sec24d
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118102603 (sec24d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118102603 (sec24d)
Membrane trafficking [BR:
hsp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
118102603 (sec24d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
118102603
NCBI-ProteinID:
XP_035004793
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All DBs
Position
23:8427466..8443517
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AA seq
1031 aa
AA seq
DB search
MSQQGYVAAPPYSQAQPGMGGYQGGFGSGPTQPLYGHYGGPPQAFTAPPAGMMKSPVSSP
AGMPPPQVGSSYNPNVQQNGAHPQRYPAPPAVSPAYGQPPHAPYNSMASTAPPAAQQLTN
QMSAMNMGSYAPGPMQSPPPPTGSVAQQPFQAPPPPAMGHPQMLPGQQSLHSSQQMPPQM
GPPQSPQMSMGGMGSPFPGPPPSGPGGFQQPGPGPIGPPGYPQQAGQFGGHMAGPQQGMQ
GAFPGTPGALAGPPQKKLDPDSIPSITQIIQDDQANQGGQVFSTNIRGQVPPLVTTDFTA
QDQGNASPRFMRCTTYSLPSTADLAKQCQVPLACIIKPFATLPKNETPLYVVDHGETGPI
RCNRCKAYMCPYMQFIDGGRRYQCSFCNCVNEVPAFFFQHLDHMGRRVDFYERPELSLGS
YEFTATIDYCKNNKRPNPPAYIFMIDVSYNNVKSGLVKLICDELKTLLEKLPREEGEESS
AIKVGFVTYNKVLHFYNVKSALAQPQMMVVSDTEDVFVPLLDGFLVNFQESRAVIVNLLD
QIPDMFADTNESETVFAPVIQAGVEAFKAAECSGKIFLFHSSMPTAEAPGKLKNRDDKKL
VNTEKEKNLFQPQKGVYEQLSKDCVAQGCCVDLFLFPSQYLDLATMGDVPSHTGGSVYKY
NNFQVETDGEHFLRDLRKDVQKSIGFDAIMRVRTSTGFRATDFFGAIHMNNTTDVEMAAV
DCDKALTVEFKHDDTLSEETGALVQCAFLYTTISGQRRLRIHNLSLNCSSQLSELYKGCE
TDSLINFFAKSAYRAILSQPLKNVREILVNQTAHMLACYRKNCATPSAASQLILPSTMKV
FPVYMNSLMKTAPLVSSTELSTDDRAHLRQSVMAMGVEDTQLLLYPRLIPLHNVDVGGDA
LPASVRCSEESLADSGMFLLENGHSVFLWLGQASPPDIIQSIFNLPSLAHLQANMFSLPE
LDNPLSKKVRSIINGLLEKRPNSMKLVIVRQKDKPELLFRQFLVEDKSLLGGASYQDFLC
HVHREIRQLLT
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcagggttatgtcgccgcacccccgtactcccaggcccagccagggatgggg
ggctaccaaggtggatttgggagtggtcctacacagcccctctatgggcactacgggggg
ccacctcaggcattcaccgctccaccagcaggaatgatgaaatcaccggtttcctctcct
gccggcatgcctccacctcaagtcggcagttcgtacaatccaaacgtccagcagaatggc
gctcatccacaaaggtaccctgctccaccagctgtatctcctgcttatggacaaccccca
catgccccatacaacagcatggcctcaactgccccgcctgcagctcagcagctcaccaat
cagatgagtgctatgaacatgggcagctatgccccagggcccatgcagagccctcctcca
ccaaccggctctgtagcccaacagcctttccaggcgcctcctccaccagcgatgggccat
ccacagatgcttcctggccagcagtcactccactcatcccagcaaatgccccctcagatg
ggtccaccgcagtcaccccaaatgagcatgggaggcatgggcagtccttttcccggccca
ccgccttcaggccccggaggttttcagcagcctggtcctggacccattggtccaccagga
tacccacagcaagctggtcagtttgggggtcacatggctgggccccagcagggcatgcaa
ggggccttccccggaacaccgggcgcactggctggcccaccgcagaagaaactggaccct
gactctatcccaagcataactcagatcatacaagatgaccaggctaaccaaggaggacag
gtcttcagcacaaacatcagaggacaggttccacctctggtcaccactgacttcacagca
caggaccagggcaatgccagtcccaggttcatgcgctgcaccacctactccctcccctcc
accgccgatctggccaagcagtgccaagtgcccctggcttgcatcattaaaccctttgcc
actttgccaaagaatgagactcctctatatgttgtggaccacggtgagacgggccccatc
cgctgcaatcgatgcaaagcctacatgtgtccctacatgcagtttatcgatggcggccgt
cgctaccagtgctctttctgcaactgtgtcaacgaagtgccagccttcttcttccaacat
cttgaccacatgggccgtagggtggacttctacgagaggcctgagttgtccttgggatcc
tacgagtttacagccaccattgactactgcaagaacaacaagcgtccgaatcctcccgcc
tacatcttcatgatcgacgtgtcctataacaacgtcaagagtggcctggtcaaactgata
tgtgacgagctgaagactctgctggagaagctgcccagagaggaaggtgaggagagctcg
gcgattaaagtgggcttcgtcacctacaacaaggtcctgcacttctacaacgtgaagagc
gctttggcccagccccagatgatggtggtgtcggacacggaggacgtgttcgtcccgctg
cttgacggcttcctcgtcaacttccaggagtcgagggctgttatcgtaaacctcctggac
cagatccctgacatgtttgcagacaccaacgagagtgaaacggtctttgctcccgtcatc
caggccggcgtggaggcatttaaggccgcagaatgtagcggaaagatcttcctcttccac
tcctccatgcccacggccgaggctcctggcaaactcaagaacagggatgacaaaaagctg
gtcaacacagagaaagagaaaaacctgttccagcctcagaaaggagtgtatgagcaactg
tcgaaggactgtgtggcacagggctgctgcgtggatctcttcctcttccccagccagtac
ctcgacttggcaaccatgggtgatgtgccctcgcacaccggaggctccgtttacaagtac
aacaactttcaggtggagacagatggggagcatttcctgagagacctcaggaaagatgtg
cagaagagcatcggatttgacgccatcatgcgtgttcgcaccagtacaggcttcagagcc
acagacttcttcggtgccatccacatgaacaacaccacagatgttgagatggcggccgtg
gactgtgacaaggccttgaccgtcgagttcaagcacgacgatacgctcagcgaggagacc
ggagcactcgtgcagtgtgccttcctgtacaccaccatcagcggccagcgacgcctgcgt
atccacaacctcagtctgaactgcagctcgcagttgtcagagctgtacaagggctgcgag
acggactcgctcatcaacttctttgccaaatcagcttaccgtgccatattgagccagcct
ctaaagaatgtgagggaaatcctggtcaaccagacagcccacatgttggcttgttacagg
aagaactgcgccaccccttccgccgccagccagctgatcctgccgagcaccatgaaggtg
ttcccagtctacatgaacagcctgatgaaaacagcccccttggtgtctagcacggagctc
tccacagacgacagggcccatctgaggcagtcggtcatggccatgggggtggaggacaca
cagctgctgctctaccctcgcctcatcccactgcacaacgtggacgttggaggcgatgct
ctgcccgcttcggtgcgctgttcagaggagtctcttgccgactctggcatgttcctgctg
gagaacggccactccgtgtttctgtggttgggccaagcaagcccccctgacatcatccag
agcatcttcaacctgccctccctcgcccacctgcaagcaaacatgttttcgctgccagag
ctggacaacccactgtcaaagaaagtccgatctatcatcaatggcctgcttgaaaagagg
ccgaactccatgaagctcgtcatcgtgaggcagaaggacaagcccgagctgttattccgt
cagttcctcgtggaggataaaagtctgctcggcggcgcctcctaccaagacttcctttgc
cacgttcaccgggagatcaggcagctgctcacctaa
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