Hippoglossus stenolepis (Pacific halibut): 118102626
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Entry
118102626 CDS
T08308
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118102626 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118102626 (dhx15)
03009 Ribosome biogenesis [BR:
hsp03009
]
118102626 (dhx15)
Enzymes [BR:
hsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118102626 (dhx15)
Spliceosome [BR:
hsp03041
]
Complex A
U2 snRNP components
U2 related factors
118102626 (dhx15)
Complex B
118102626 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
118102626 (dhx15)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
90S particles
Helicases
118102626 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
HA2_N
Helicase_C
AAA_22
AAA_19
SRP54
Flavi_DEAD
AAA_29
AAA_30
AAA_25
AAA_7
Motif
Other DBs
NCBI-GeneID:
118102626
NCBI-ProteinID:
XP_035004834
LinkDB
All DBs
Position
23:complement(8972709..8998232)
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AA seq
734 aa
AA seq
DB search
MRRGYDRDRDDRSKERARERDRDRDRDVKSSVVHNIQTPCSGGFLKPNPVQQQINPFTNL
PHTPRYYEILKKRLQLPVWDYRESFSNIMMRNQSFVLVGETGSGKTTQIPQWCVDMVRST
GGPKRAVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTVLKYMTDGML
LREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRPDLKVIVMSATLDAGKFQ
VYFDSCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEVDEGDLLLFLTGQEE
IDEACKRIKREVEDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPNKPSGAIGRKVVVST
NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTCPGKC
FRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALE
LLNYLAALNNDGDLTELGSMMAEFPLDPQLAKMVIASCEFNCSNEILSITAMLSVPQCFV
RPTEARKVADESKMRFAHIDGDHMTLLNVYHAFKQNHDATQWCYDNFVNYRSLMSADNVR
QQLSRIMDRFNLPRRSTEFNSRDYYINIRRALVTGFFMQIAHLERTGHYLTVKDNQVVQL
HPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDVKPEWLVKVAPQYYEMSNFPQCEAKRQLE
RIVAKLSTKEYSQY
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgtggctatgacagagaccgtgatgatcggtcgaaagagagggcccgggagcga
gaccgtgaccgggacagggacgtgaagtcatctgtggtgcacaacatccagactccatgt
agtggaggctttcttaagccaaaccctgtacagcagcaaatcaacccattcaccaacctg
ccccacacgccacgctactatgagatcctcaagaagcggctgcagctgcctgtctgggac
tacagagagagcttcagtaacatcatgatgcggaaccagtcctttgtgctggtgggagag
acgggctctggaaagaccacacagatcccccagtggtgtgtggacatggtgcgctccacg
ggggggccaaagagagcggtggcctgcacccagccccggcgggtggcggccatgagcgtc
gctcagagggtggctgatgagatggatgtcatgctgggccaagaggttggctattccatc
aggtttgaggactgcagctctgccaagactgtactcaagtatatgacagatggaatgttg
ctgcgggaagccatgaacgatcccctgctggagcgctacggtgtcatcatcctggacgag
gcccacgaacgcacattagctacagacatcctcatgggggtcctcaaggaggtggtccgc
cagaggcctgacctcaaggtcattgtcatgagcgccacactcgacgccggcaagttccag
gtgtactttgacagttgcccactgctgaccatccctggacgcacccaccccgtggagatt
ttctacacaccggaaccagagcgcgactacctggaggcggccatccggactgtgatccag
atccacatgtgcgaggtggatgaaggggaccttctgcttttcctcactggacaagaggaa
attgatgaagcctgcaagcgaatcaagagagaagttgaggacctggggcctgaagttggc
gatatcaaaatcatcccgttgtattccactctgcctccacagcagcaacagaggatcttc
gagccacccccacccaataaaccaagcggtgcaatcggaaggaaggtcgtcgtgtcaaca
aacatcgcagagacgtcccttaccattgacggtgtggtgtttgtaattgatcctggattt
gccaagcaaaaggtgtataacccaagaatccgagtggagtcgcttttggtgacggccatc
agcaaggcctcagcccagcagagggcagggcgcgctggaaggacgtgcccaggaaagtgt
ttccgcctttacactgagaaagcctacaagacagaaatgcaggacaacacatatccagag
atcctgaggtcgaacctgggctctgtggtgctgcagctgaagaagctgggtattgatgac
ctggtgcacttcgacttcatggacccaccagccccagagaccctgatgcgagccctggag
ttgctgaactacctggcggcgctcaacaacgatggcgacctgacggagttgggctccatg
atggcagagttccccctggacccccagctggccaaaatggtcatcgccagctgtgaattc
aactgttccaacgagatcctctccatcactgccatgttgtcagtcccacagtgcttcgtc
cgacccacggaggctaggaaggtggccgacgagtccaagatgcgcttcgcccacatcgac
ggagaccacatgacactgctcaacgtctaccacgcattcaaacaaaaccacgacgctact
cagtggtgctatgacaactttgtcaactaccgctcgctgatgtcggcagacaacgtgcgg
cagcagttgtccaggatcatggaccgcttcaatctgccgcgacggagcaccgagttcaac
agcagagactactacatcaacatccgccgagcgctggtcactggcttcttcatgcagatc
gctcacctggagcgcactggccattacctcacggtgaaggacaaccaagtcgttcagctg
cacccctccaccgtgctggaccacaagcccgagtgggtgctctacaatgagttcgtgctc
accaccaagaattacatccgcacgtgcacggacgtcaaaccagagtggttggtgaaagtc
gccccgcagtactacgagatgagcaacttcccccagtgtgaagcaaagagacagttggag
cgaattgttgcaaaactctccaccaaggagtactctcagtactaa
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