Hippoglossus stenolepis (Pacific halibut): 118102639
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Entry
118102639 CDS
T08308
Symbol
chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118102639 (chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118102639 (chrnb1)
Ion channels [BR:
hsp04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
118102639 (chrnb1)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
118102639
NCBI-ProteinID:
XP_035004860
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All DBs
Position
23:11915072..11934441
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AA seq
497 aa
AA seq
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MKRSDLLLLTCCLCSLGTLGGAAEMEQVLMKKIFTNYNLMVRPAPTPEYRVVVRVGMVLS
SFVGLNMKNEEMSTVVVMDLEWTDHRLSWKPKDYDGIEVLRIPAAKVWLPDIVLINNNDG
VFHVALKVHVQAYSNGRVTWTPPALYCSSCGVKVTLFPFDWQNCTMQFRSYTYDSTEIDL
QYALDSKGKEIREILLDDGYTEGGEWHIKHKPARKVVSDDMYEDMVFYLIIERKPLYYVL
NIILPCILITIIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADKIPETSLGVPIIVN
YIMFTMILVTFSVILGVVVLNLHHRSPNTHMMPMWVRKIFIHMLPPYLRMLRPKVETPLF
LENLPRREKPKIAISKVADEYFIRKPDSSILFPKPHRFQPEGMCTDMRKFINGPSSYLSL
PDELKSAIEAITYIAEALQAAKDYEALKEDWQYVAMVVDRMFLWLFVIITTVGTLAIFSD
AKFNHTPTDPFQVQLNH
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgctcggatctgctcctgctgacatgttgcctgtgcagcctgggcacattggga
ggcgccgcggagatggagcaggttctgatgaagaagatcttcaccaactacaacctcatg
gtccggccagcccccaccccggaatatagggtggtggtccgcgtgggtatggtcctgtcc
tccttcgttgggctgaatatgaagaatgaagaaatgagcacggttgttgtcatggacctg
gaatggacagatcatcggttgtcctggaaacccaaggattatgatgggattgaggtgttg
cgtatccccgctgccaaggtttggctgcctgacatcgtcctcatcaacaataatgacggc
gtgtttcatgtggccttgaaagtccacgtccaggcttacagtaacggcagagtaacctgg
accccccctgcactgtactgcagctcctgtggagttaaggtgacattgttccctttcgac
tggcagaactgcaccatgcagttccgctcttacacgtacgactcgacggagatcgacctg
cagtacgcgctggactcaaagggcaaagagatacgggagatcctcctggacgatggctac
accgagggcggcgagtggcacatcaagcacaagccggcgaggaaggtggtgagtgacgac
atgtacgaggacatggtcttctacctgatcatcgagaggaagcctctgtactacgtcctg
aatatcatcctcccctgcatcctcatcaccatcatcgccatctttaacttctacctgcca
cctgacgcaggtgaaaagatgggtctgtccatcaacgtgctgctgaccctcaccgtcttc
ctgctgctgctggctgataagatccccgagacgtccctgggcgtccccatcatcgtcaac
tacatcatgttcaccatgatcctcgtcaccttctccgtcatcctcggtgtggtcgtcctc
aacctgcatcaccgctcccccaacacccatatgatgcccatgtgggtccgtaagatcttc
atccacatgcttcctccttaccttcgcatgctgcggcccaaagtggagacccccctgttc
ctggagaacctgccccgccgagagaaacccaagatcgccatcagcaaagtggccgatgaa
tacttcatccgcaaaccagactcgtccatcttgttccctaagccccacaggtttcagcca
gagggcatgtgcacggacatgagaaagtttatcaacggccccagtagctacctttcatta
ccggacgagctgaagtcagccatagaagccatcacatatatcgcagaggctctacaggct
gcgaaagactacgaggctctgaaggaggactggcagtacgtggccatggtggtggaccgc
atgttcctctggctctttgtcatcatcaccaccgtgggaaccttggccatcttctccgac
gccaaattcaaccacacgcccactgacccttttcaagtccaactgaatcactga
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