Hippoglossus stenolepis (Pacific halibut): 118102709
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Entry
118102709 CDS
T08308
Symbol
rab1ba
Name
(RefSeq) zRAB1B, member RAS oncogene family a
KO
K07874
Ras-related protein Rab-1A
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118102709 (rab1ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118102709 (rab1ba)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118102709 (rab1ba)
04031 GTP-binding proteins [BR:
hsp04031
]
118102709 (rab1ba)
Membrane trafficking [BR:
hsp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
118102709 (rab1ba)
Autophagy
Other autophagy associated proteins
118102709 (rab1ba)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118102709 (rab1ba)
Exosomal proteins of other body fluids (saliva and urine)
118102709 (rab1ba)
Exosomal proteins of colorectal cancer cells
118102709 (rab1ba)
GTP-binding proteins [BR:
hsp04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
118102709 (rab1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
SRPRB
AAA
FeoB_N
AAA_7
ABC_tran
AAA_16
PduV-EutP
Septin
AAA_29
LANC_like
AAA_22
AAA_5
CRAL_TRIO_2
Motif
Other DBs
NCBI-GeneID:
118102709
NCBI-ProteinID:
XP_035005001
LinkDB
All DBs
Position
23:15915633..15928876
Genome browser
AA seq
201 aa
AA seq
DB search
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAG
SDKPNLKIESTPVRQSGGGCC
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgaatatgactatctgttcaagctcctgctgattggagactctggagtagga
aagtcctgtcttctgctgcgatttgcagatgacacctacacagagagctacatcagcacc
attggagtggacttcaagatccgcaccattgagctggatggcaagaccattaaactgcag
atttgggacactgctggtcaagagaggtttcgtaccatcacctccagttactaccgtgga
gcccatggcatcatagtcgtgtatgatgtcacagatcaggagtcctataacaatgtcaag
cagtggcttcaggaaatcgaccgctacgccagtgaaaatgtcaacaagcttctggtgggc
aacaagtgtgacctgaccaccaagaaagtagtggactacacaacagccaaggagtttgct
gactctttggccatccccttcctggagacaagcgccaaaaacgccaccaatgtagagcag
gctttcatgaccatggctgcagagatcaagaagcgcatgggccccggagccacagctggt
agcgacaaacccaacttaaaaatcgagagcactcccgtcaggcagtctggagggggctgc
tgctaa
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