Hippoglossus stenolepis (Pacific halibut): 118102757
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Entry
118102757 CDS
T08308
Symbol
cyldb
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04217
Necroptosis
hsp04622
RIG-I-like receptor signaling pathway
hsp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
118102757 (cyldb)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118102757 (cyldb)
04625 C-type lectin receptor signaling pathway
118102757 (cyldb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118102757 (cyldb)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118102757 (cyldb)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118102757 (cyldb)
Peptidases and inhibitors [BR:
hsp01002
]
Cysteine peptidases
Family C67
118102757 (cyldb)
Ubiquitin system [BR:
hsp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118102757 (cyldb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
118102757
NCBI-ProteinID:
XP_035005128
LinkDB
All DBs
Position
3:23974377..23981056
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AA seq
704 aa
AA seq
DB search
MEPKTVVKEKYFIVTRGKSRKGFCRGCIGRVEAETQCGELMGLLFSGGSNVGSPKSGGVV
RREDTYPLTRHQAQLLLFVSSFSKRVELLCNPQLFSAICELTQDDLVVVKHKKGHLPGLV
KNLMQIGRKENKDDLYMLGFEVEFVDSDHNLSSKKPTPLPLFSAADIIQVVPSNSVPLGL
HWKDGQCKCLNTKAVTRINSMPHISSRARQGREGHTEHSVIQNQSPSTSPAPLEVGSMVE
VVSNSRITVYGVVQWLGVPAGKTGEWAGIELDYEVNGCSDGIYGGQRYFTCKGGRALFVP
VTKCSPDGRFVYSSTGSGTSKPTEIPPVPPFEDPEEDAPPIPESEALSLLEGRMKGIQGH
INSCYLDATLFSLFSTSVTLDHICRKPADTEQPITGTLRKIVNRLRRQGFVPTESVMNFR
KQLGCDTFQTEEKDPEEFITVLFQKVFSTEPLLKLRSRRETCQGAYTLQIFLEKEQMGQM
PTVQQLLDTSCLSGDIKFDEAPHCLIVQMPRFGNKYKMFSHIIPSTELDITDLLYNSPRE
CFVCGHLAEYECLQCLPDRKLQPGRIKQYCTTCNTQVHSHHTRQGHSPKPLQVPANVSPD
TPVPRHMMQLFAVLCIQTSHYVSFVKYGPDPRSWLFFDSMADRCGDDQSGFNIPEIRACP
ELGDFLSRPEEELARANPSQTPELTRRLLCDSYMFLYQSPATPL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaaaactgtcgtgaaggagaagtatttcatcgtgacacgagggaagtcgagg
aaaggcttctgccggggatgtatcggccgtgtggaggcagagacgcagtgtggggagctg
atgggactcctgttctctggtggcagcaacgtcgggagccccaagagcggcggtgtggtg
cggagggaggacacgtaccctctgacccgacaccaggcccagcttctgctcttcgtctcc
tctttcagcaagcgtgtggagctgctgtgcaacccccagctgttctcagccatctgcgag
ctgactcaggacgacctggtggtggtgaagcacaagaagggacacctgcccggcctggtg
aagaacctgatgcagattgggaggaaggagaacaaagatgacctctatatgctcggcttt
gaggtggaatttgtggacagtgatcacaacctgtcatccaagaaacccactcccctgccc
ttgttcagtgctgcagacatcattcaggtggtcccgtctaactcggtccccctcggactg
cactggaaagacggacaatgtaagtgtctaaacacgaaagcggtgacgcgcatcaactcc
atgccacacataagttcccgtgcacgccaagggagagagggccatacggagcacagtgtc
attcagaaccaaagcccgagcacgtctcctgcgcctctggaggtgggatccatggtggag
gtggtgtccaactccaggatcacagtgtacggagtcgtccagtggttgggagtccctgca
ggaaagactggtgaatgggctgggatcgaactggactatgaggtgaacggctgctctgat
gggatatatggaggccagagatatttcacatgcaaagggggccgagctttgtttgttcct
gtcacaaagtgcagccctgatggcagatttgtctactcctctacaggaagtgggacctca
aagcccactgaaatacctccagttcctccatttgaggaccctgaggaggatgcaccacct
atcccggagtccgaggccttgtctttgttagagggaagaatgaaggggattcagggtcat
atcaactcctgttatcttgatgccacactcttcagtttgttcagcacgtctgtgaccctg
gatcacatctgcaggaagcctgctgacacagagcagcccataaccggcactctgaggaaa
atagtcaaccgtttacgcagacaaggatttgtgccaactgagagcgtcatgaatttccgc
aaacagctcggctgcgacacatttcaaacagaggaaaaggacccagaggagttcatcaca
gtcctctttcagaaggtgttcagcacagagccacttctcaagctcagatcgaggcgagaa
acatgtcagggtgcctacaccttgcagatctttctagaaaaagagcagatgggacagatg
cccaccgtccaacagctgctggacacatcctgcctgtcaggtgacatcaagtttgatgag
gcaccacactgtctcattgttcagatgccacggtttggaaacaagtacaagatgttttct
cacatcattccctccactgagctggatatcacagatcttctatacaactctccaagagaa
tgctttgtctgtggacatttggccgagtatgagtgtcttcagtgtctaccagatcgcaaa
ctacagccaggaagaatcaaacagtactgcactacctgcaacacacaggtgcacagtcat
cacacacggcagggtcactcccccaaacctctacaggttccagcaaatgtctcccctgac
actcctgtgccaaggcacatgatgcagctgtttgctgtgctctgcattcaaaccagccac
tacgtgtcttttgtcaaatatggccctgaccctcgctcctggctcttctttgacagcatg
gcagacagatgcggtgacgatcaaagtggcttcaacattccagagatccgagcttgtccg
gagctgggcgacttcctgtcccggccggaggaggagctggctcgggccaacccctcccag
actcctgagctgacgcgtaggcttctgtgtgactcctacatgtttttataccagagccca
gccacgccactttga
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