Hippoglossus stenolepis (Pacific halibut): 118102799
Help
Entry
118102799 CDS
T08308
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hsp01001
]
118102799
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118102799
Enzymes [BR:
hsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118102799
Protein kinases [BR:
hsp01001
]
Serine/threonine kinases: Other
Other
118102799
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118102799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
EIF3I
WAPL
Beta-prop_WDR90_POC16_2nd
LisH
Beta-prop_WDR19_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
118102799
NCBI-ProteinID:
XP_035005210
LinkDB
All DBs
Position
3:complement(1348739..1364296)
Genome browser
AA seq
1576 aa
AA seq
DB search
MSSPEEEPSSAVSAILSSALSSAVSAAMAVAMAVEAKAELSQLLDEWEEAQRGSTEQLVA
SLTKISELIERETSEYHKADPDPFDDRHPGLRRANPDGMLGQLLKMLFMNNNFTNALLDT
YIMTSRELSLRTAACRLLLDIMPGLETSVVFQEKEGLVETLFGFAREAERPLCVYATGLL
ARAMSNQEVAAGYRPSNLQLVPMMILRLQELQTQEAENHLGPNKTLQHLPQVEATQTANI
SADQRDKTEGEDVGEDKDRKDGDAESSRPVLKAGSKPFAQKNGGSGSSSGGGSSSTRMLP
HFVDQASNDPASRGTQDRLGGVKRPAGKENGRNAKQKLSLERTNTSNQPISSSWSEMSSM
VIGSDYCLSPLSPAMEQRLILQYLQPLGEYQELLAIFMQQDTRLLLMNYIDLRQTKNVQL
TYDALLYLASLLLHKKFVAEFIAHGGVQKLLQIPRPSMAATGVSLCLYYLAYNQDAMERV
CMLPDGVLSDMVSYAVWLLESSHASGVCHATMFFSISFSFRAVLQLFDQQDGLRRLVNLV
STLEILNRESEVSIMSDDQVFSSRQTAKHTCMAVRRYFEAHLAVKAEQVKQALHTSDKGT
IVPQQQFYKAYTYTREQVIEMMEFLIECGPPQLHWEPVELFYKLSCVPLMLQLISTACDW
RTYYGRSDTVRYALDILAILTVVPKVQLVLADTVDVLDETRSLVSTVGMSVILGVAEGEV
FINDAEIQKSALQVIINCVCAPDQSLNSVGAFAVAPLRPSLHPQQPPTPFNKVLAHMWQV
VQNNNGIKVLLSLLSVKMPITDADLIRSLACKALVGLSRCSAIRQIISKLPLFTSGHIQQ
LMKDPVLQDKRSEHVRFCRYAAEMTERVSGKPLLMGTDVSLARLQRANVVAQSRITFPEK
ELLMLVRNHLVAKGLHDTAGLLVKEANLGSLCPNASSCVSPPPSSLIPRTCRLAGGIAAR
AASHVGYSPVSSVVPSTSPPPSRTLVTPHPPCSSSSSTSALPTPLPPHSHGQGSHPVGRI
LFTRERPVASCNSGKKLRALKQKSDHGAFIQTPAMKKQLERHLPSPPTLDSIITEYLREQ
HARCPNPVTTCPPFSLFTPHRCPEPKQRRQAPPNFTVRLGSRVLYPKYGGVDRGCLDRHL
IFSRFRPMSVFHEGDGDESGFTCCAFSARERFLMLGTCSGRLKFYNVFSGEEEANYTCHT
SAITHLEPSRDGKLLLTSASWSVPLSALWSVDGVFSMKNSFVDDHYVEFSKLSQDRVIGT
KDQVAHIYDIQTGQKTLTLNDPGLANNYKRNCATFNPTDDLVLNDGVLWDVRASRAVHKF
DKFNMNISGVFHPNSLEVIINTEIWDLKTFHLLHTVPALDQCRLVFNSNATIMYGAMLQA
DDEDDVMDQQMKSPFGSSFRTFDATDYKPIATVDVKRNIFDLCTDNKDCYLAVIENQDTV
SLDTVCRLYEVGRQKLAEEGDDDDQEDDDQDDDDSSDTDDDDDDDDDMDTDPLIEELTNR
ENRENGDGADSPTDEEIADLLGGNSDDDDNDDSEDDDDDSDRSDDRSDPFDPDFDGERSD
DEDLQLLRSLHDRWFS
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccccagaagaagaaccatcgtctgccgtgtcggccattctgtcgtctgccctg
tcgtccgccgtgtcggccgccatggccgtggctatggcggtggaagctaaggcggagctt
tcccagctgttagacgagtgggaggaggcacagcgaggcagcacggagcagctggtggcc
agcctcacgaaaatctctgagctgattgaacgagagacatcagagtatcacaaagcagat
ccagatccgtttgatgatcgacatccaggtttacgtcgggcgaacccagacggcatgctg
ggacagctcctgaagatgctcttcatgaacaacaacttcactaacgctttgttggacacg
tacatcatgacgagcagagaactgagcctcagaacagccgcctgtcgtctgctgctggac
atcatgccgggcctcgagacctccgtcgttttccaagagaaggaggggcttgtggagacg
ttgtttggctttgcccgtgaagccgagcggccgctgtgcgtctacgccacggggctgctg
gcccgagccatgagcaaccaggaggtggcagccggctacagaccctcgaacctgcagctg
gtaccgatgatgattctgcgtctgcaagagctgcaaactcaagaggccgagaatcacctc
ggtcccaacaagaccctccagcatcttcctcaggtcgaagccacacaaaccgcaaacatc
tcagcagaccagcgagacaagacagagggcgaagacgtgggcgaggacaaagacagaaaa
gacggcgacgcagagagcagcaggccggtgttgaaggccggttccaaaccttttgcccag
aaaaatggtggaagcggcagcagcagcggtggaggatccagctccacacgaatgcttcca
cactttgtggaccaagcaagcaatgaccccgcctccagggggacgcaggacagactggga
ggagtcaaaagaccagcgggaaaggagaacggaaggaacgccaaacagaagctcagcttg
gagaggaccaacaccagtaaccagccaatcagcagctcctggtctgagatgagctcaatg
gtgattggatctgactactgcctttcaccgctgagcccggccatggagcagaggctcatc
ctgcagtacctgcagccgctcggagaatatcaagagttgcttgccatcttcatgcagcag
gacacgcgcttgttgctgatgaactacatcgacctcagacagaccaagaatgtgcagctc
acctacgacgctctgctgtatctcgcctcgttgctcctgcataaaaagttcgtggcagag
ttcattgctcatggaggcgtccagaaacttctgcagatcccgaggccctcgatggcagca
accggagtttcactctgcttgtactatctggcgtacaaccaagacgccatggagagggtg
tgtatgctcccagacggcgttctttccgacatggtgtcctacgcagtgtggctgctggag
tcgtcccacgcttccggcgtctgccacgccaccatgttcttctccatctccttctcgttc
agggccgtgctgcagctcttcgaccagcaggacgggctgcgcaggctcgtcaacctggtt
agtactctggagattctcaacagagagagtgaagtgtccataatgagtgatgaccaggtt
ttctccagccgacagacggccaaacatacctgcatggccgtccgcaggtattttgaggct
cacctggcagtgaaggccgagcaggtgaagcaggccctgcacacgtcagacaaaggcacc
atcgttccccagcagcagttttacaaggcttacacgtacaccagagagcaggtgattgag
atgatggagttcctcatcgagtgcggacctccgcagctccactgggaaccggtggagctc
ttctacaagttgtcctgtgttcccttaatgctgcagctgatctctacagcctgtgactgg
aggacttactacggcaggagtgacactgtgcgttatgccttggacatcctggccatcctg
actgtggttcctaaagtccagctggtgctggcagacactgtcgatgttctggatgagacc
aggtcgctggtttccactgtgggtatgagcgtcatcctgggcgtcgctgagggcgaggtg
ttcatcaacgacgctgaaatccaaaagtctgcgctgcaggtcataataaactgtgtgtgc
gctccggaccagagcctgaacagtgtgggggccttcgctgtcgcccccctcaggccgtcc
ctccacccccagcagcctcccacccccttcaacaaggtgctggcccacatgtggcaggta
gtgcagaacaacaacgggataaaggttctcctgtctctcctgtcggtgaagatgccgatc
acagacgcagacctgatccgctctctggcctgcaaggctctggtcggactctctcgctgc
tcagcgatcagacaaatcatcagcaaactgccactgttcaccagcggccacattcaacag
ctgatgaaggatccggtgctgcaggacaaacgcagtgagcacgtccggttctgccgctac
gctgccgagatgacggagcgagtgtctgggaagcctttgctcatgggcaccgacgtgtcg
ctggctcgtctgcagagggccaacgtggtcgcccagtcacggatcaccttccctgagaag
gaactcctcatgctggtcaggaaccaccttgtggccaaagggctccatgacacggccggc
ctgctcgttaaggaagctaatttaggatccttgtgtcccaacgcctcgtcctgcgtcagc
cctcccccctcctccctgattcccaggacttgtcggctggccggtgggattgcggcccgc
gccgccagccacgtcggatactctcccgtgtcctcggtggtcccctccacctctcctcct
ccctcccgcaccctggtcacgcctcaccccccatgctcctcttcctcgtctacctctgcc
ctccctactcctctgcctcctcattcccacggacagggttcacatccagttggacggatt
ttgttcacacgggaacgcccagtggccagttgcaactcagggaaaaaacttcgtgcgctg
aagcagaagtccgaccacggtgctttcatccagactccggccatgaagaagcagctggag
cgccaccttccttcccccccgacccttgacagcatcatcacagaatacctgagagaacaa
cacgcccgctgccccaatcccgtcaccacctgcccgcccttttccctgttcacgccgcac
agatgccccgagcccaagcagaggcgacaggcaccgcccaacttcactgtccgcctgggc
agccgggtgctgtaccccaaatacggaggtgtggaccgggggtgtctggatcgacatctg
atatttagcaggtttcgcccaatgtccgtcttccacgagggcgacggggacgagagcggc
ttcacctgttgtgccttctcagcccgagagcgtttcctgatgctgggaacctgctccggt
cgactcaaattctacaacgtcttctctggagaggaggaggcgaactacacctgccacaca
tcagccatcacgcacctcgaaccctccagggatggaaagctgctgctcacctcggcctct
tggagcgtccccctgtccgctctctggagtgtggatggtgtctttagcatgaagaactct
tttgtagacgaccactacgttgagttcagtaaactctctcaggacagagtcatcggcacc
aaagaccaagtcgcacacatctacgacatccagacgggtcagaagacgttgaccctgaac
gaccccggcctggccaataactacaagaggaactgcgccaccttcaacccgaccgatgac
ctggtgctcaacgacggcgtgctgtgggacgttcgagcgtcacgggccgtccataagttc
gacaagttcaacatgaacatcagcggcgtgttccatcccaacagcctggaggtcatcatc
aacactgagatttgggacctgaagaccttccacctcctgcacactgtccccgccctcgac
cagtgcagactcgtcttcaacagcaacgccaccatcatgtatggagcaatgctacaagcc
gatgatgaggatgatgtgatggatcagcagatgaagagtccctttggttcgtccttcaga
acctttgatgccacagactacaaacccattgccacagtggacgtaaagaggaacatcttt
gacctgtgcactgacaacaaggactgttacctggctgttatcgagaaccaggacacggtg
agtttggacacggtgtgtcgtctctacgaggtgggacgacagaaactggctgaggaggga
gacgacgacgaccaggaagatgacgaccaggatgacgacgactcgtcagacacagacgac
gacgacgatgacgacgacgatatggacacagacccgctcatagaggaactgaccaatcga
gagaatcgggaaaacggggacggggccgactcgcccacagatgaagagatcgcagatctt
cttggaggcaacagcgacgatgacgacaacgatgactcggaggacgacgacgacgactcc
gacagaagtgatgacaggtcggatcccttcgaccccgactttgacggagaacgatcagat
gacgaggaccttcaactcttgcggtcgctccatgaccgatggttctcctga
DBGET
integrated database retrieval system
