Hippoglossus stenolepis (Pacific halibut): 118102833
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Entry
118102833 CDS
T08308
Name
(RefSeq) RNA-binding protein 4.1-like
KO
K13187
RNA-binding protein 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118102833
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118102833
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
zf-CCHC
zf-CCHC_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
118102833
NCBI-ProteinID:
XP_047194879
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All DBs
Position
23:complement(15614155..15621147)
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AA seq
385 aa
AA seq
DB search
MVKIFIGNLACNTTPEELRELFEKYGKVAECDIVKNYGFVHMNNVSEAEVAIQNLHQHQL
HGWRMNVEMSKGRPKSTTKLHVSNLGEGITCDVLRAKFEDFGSVVECDIVKDYAFIHMER
VEDAMDAISKMDNTAFKGKLMSVQLSTSRLRTAPGMGEHTGCYVCGKHGHWSKDCPIGRS
DSHGDDERGHSGRAPPRGPPGYGRGSYGMAPPPGADYMGGSAYSQGSYVGGIPPPPRRLS
GYGSELGDRYGGRPAGSYADRSSAYDRDRLYSSVDYYEKYRARPYGSSYFEDRRMSYLPP
PPPPPSSLSKLSSGVDPYDRRPPPPPVAAASAAAYYAQDRNPIGRVPVSSAGYTYERTRL
SPVSSRSTYATPRPKDHYAPRYAPY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatttttatcggcaatcttgcctgcaacaccacacccgaggagctgcgtgaa
ctcttcgagaagtacggcaaagttgcggaatgtgacatcgtcaaaaattatgggtttgtt
catatgaacaacgtctcggaagcagaggtggccattcagaacctccaccaacaccagttg
cacggctggcgtatgaacgtggagatgagcaaagggaggcccaagtccaccaccaagctg
cacgtcagtaaccttggcgaaggcatcacctgtgatgttctgcgggcaaagtttgaagat
tttggctcagtggtggaatgtgacatagtgaaggactatgcatttattcacatggagcga
gtggaggatgccatggatgccatcagtaagatggacaacacagcctttaaaggcaagctg
atgagcgtacagctgtccaccagtcggcttcgcactgccccgggaatgggagaacatacc
ggctgctatgtctgcgggaaacatggtcactggtcgaaagactgtccaatcggtcggagc
gatagccacggtgatgacgagagaggtcacagcggccgggcccccccacgcggtccccca
ggttatggcaggggcagctacggaatggccccacctccaggagctgattacatgggtggc
tctgcgtatagtcagggtagttatgtgggtggtatccctccaccccctcgtaggctcagt
ggctacggctctgagctgggggatagatatggaggcagaccagcaggctcctatgctgac
aggtcatcagcttatgatcgtgaccgtctttatagcagtgttgactattatgagaagtac
agagctcggccttatggctcaagctatttcgaggatcgtcgcatgtcttatctcccccct
cccccaccccccccttcctccctttcaaagctctcctccggtgtcgatccgtacgaccgt
cggccaccgcctccacctgtagcggccgcttcagctgctgcttactatgcacaagaccgc
aacccgatcggacgagtacccgtctcttcggccggctacacctatgagcgaacacggctg
tcaccggtgtcctccaggagcacctacgctactccgcgacccaaggatcattatgcgcca
cgttacgcgccttactaa
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