Hippoglossus stenolepis (Pacific halibut): 118102869
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Entry
118102869 CDS
T08308
Symbol
dysf
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118102869 (dysf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118102869 (dysf)
Membrane trafficking [BR:
hsp04131
]
Endosome - Lysosome transport
Others
Ferlins
118102869 (dysf)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118102869 (dysf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
FerA
FerI
Pex24p
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
118102869
NCBI-ProteinID:
XP_035005327
LinkDB
All DBs
Position
23:complement(2923893..2971988)
Genome browser
AA seq
2141 aa
AA seq
DB search
MLRVFILCAERLQTPDDDVSDAYCQVIYEGSKKKTKVIKNNSNPVWNEGFEWDLKGIPLD
SGAELHCVVKDHEKMGRNRFMGECRLALRDVMNSPSLAASFTISLLDTKRNNTGATLTLQ
VSYIPPPGSFPLFQPPSQPEAYSHNNPSVELDTVTMISLDTLGEEDTESLMMLEPPEDQG
PDDGRSMVIVGPQGPPGKESPTNHTPKRSPPSYNAQGGLRKRRKGSSSQHRPLPNKPQDL
QVRVRVIEGRQLPGINIKPVVKVTVAGQTKRTRIRKGNNPVFDETFFLNFFETPSDLFDE
PIFITVCDSRSLRTDAVIGEFKLDVGTVYNEHRHCFLRKWLLLCDPDDLSAGVKGYLKVS
LLVLAAGDEPPADKRECVEDKEDIEGNLLRPAGLSLRGAAFTLRIFRAEDLPQMDDAFMD
GMKHILGFDSNRKNLVDPLVEIHFAGKTICTKILEKNANPQWNQSLAMPIRFPSMCEKMR
IRILDWDRASHNDVIGTTHLCMSKISAPGGEIDDDLTPRTVQPGIDDSLGFLPTFGPCFV
NLYGSAREFTAFSDPHENLNLGKGEGVAYRGRVLVELTTKLADKPEQRTEDIPSDDLLVV
EKFLRKRKFSLFVAFYSATLLQDVDDAIQFEVSIGNYGNKFDYTCLPLASTTQFSRAVFD
GCHYYYLPWGNVKPVVVVSSEWEDIKPRIEALNMLLSIIDRLEASLQQVQLEVKTGSDLE
DLEQRVVELLDQVITDCSEELPSLAQWQCATPLDRSLRHIRTLHLQQIVAAALALKHGPA
TDLSTVLEQAEDWASRLRTMAEEPQNSLPDIVIWMLQGDRRVAYHRIPAHTVIFSQEHCG
KHCGQLQTVFLKYPQGSGAEAKLPGQLRVKLWFGLAADVKHFNQFAEGKLSVFAETYENQ
TRLALVGNWGTTGLTYPKFSDVTGRVKLPKESFKPSPGWTWAGDWYISPEKTMLFEADAG
HMTFSEEVFENQMRLPGGQWIGMPEGYTDVNGEKAVPKDDVECPPGWAWEEEEWSEDLNR
AVDDQGWEYGITIPPDRRPKSWVPAEKMYHTNRRRRWVRMRRRDQQKMEALRKQRPDEAD
RELWEYASLFGWRFHLKPRKTDSFRRRRWRCRMEPLEKTGPAAIFALECSLSSIEDKSED
RSITTTFGVNRPTISCFFDSGSRYHLRCYLYQARDLLAMDKDSFSDAYAVVSYLHQSQRT
VTVRNTLNPIWDQTLIFYELEIFGDPEAMMANPPNVVVELYDQDTYGADEYMGRCVCQPT
VTPSPRLTWFPVRQGGKNAGELLAAFELIRREKPSVHHIPGQEGGDITTSTHVLDELMFS
GFLTENLQQWPEESDLPYLPPQREPNVFMVPQGIKPVLQRTAIEILAWGVRNLKSFQLAS
VTSPSLQVECGGTMVQSCVIRSVKKKPNFDVNRLILDVRLPREELYMPPIVIKVIDNRQF
GRKPVVGQCTIRLLEEFRCDPEEERAAAEEESEQDGWRRETPHSISGEVFVDIDDEEPLV
PDQFADGTCSAIINLSASSSSLHTVPWGEEFMDWWSKFYASTGEKNKCGTYLEKGFDTLK
VFERELEKVEGYGGLSDFCQTFKLFRGKTQDEGEDPSVVGEFKGMFKIYPLPDDPSASAP
PRQFRKLPPNGIEECLVRVYVIEAQGLQPKDTNGKCDPYVKITLGKKTVNDHDNYIPCTL
DPVFGKMFEFPCSLPVDKDLRVMVYDHDMLTKDEKIGETVIDLENRFLSRYGALCGLPQS
YCVSGVNQWRDQLTPRQLLGRVCERRNLRKPVYQDDCVLFRGDRHTAADLDDKNECKRHL
GPLKERLSLHILRKLGLVPEHVETRPLYNPLQPDIEQGRLMMWVDLFPKSLGPPGPPFNI
TPRKAKKFFLRCVIWNTSDVILDDVSISGERMSDIYVKGWLDGHEHIKQKTDVHYRSLGG
EGNFNYRFLFPFHYLPAEQLCVVDKKEHFWSVDKAETKLAPKLTVQIWDNDKFSFDDYLG
HLVFDLNHMLRPAKSPEKCDLQLLQQSSERLVSLFEQKTVKGWWPCTCEKNGEKIIAGKV
EMSLEVVTEQEQDERPAGHGRDEPNMNPHLEEPQRPETSFLWFSSPFKTLRFILWRRFKW
FILLFIIFFFIILFFGVFLYAFPNYAAMKMVGPFGPAKAAE
NT seq
6426 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtgtgttcatcctgtgtgcagagcgtctgcaaacgccggacgacgacgtcagt
gatgcctactgccaagtcatctatgaagggtccaagaagaagacgaaggtcatcaagaac
aactcgaatcccgtctggaacgagggcttcgagtgggacctgaaggggattcctctggac
tctggagccgagctgcactgtgtcgtcaaagaccatgagaagatggggaggaacaggttc
atgggagaatgtcggctcgctctcagagacgtgatgaactctcccagcctggccgcctct
ttcaccatctccctgctggacaccaagagaaacaacacaggggccacgctgaccctccag
gtttcctacatcccccctccaggatcgtttcccctcttccagcctccttcccagcctgag
gcctattcccacaacaaccccagcgtggagctggacacggtcacaatgatttctctggac
acgctgggcgaggaggacacggagagtctgatgatgctggagcccccagaggaccagggg
ccggacgacggacggtccatggtcatcgtcggccctcaggggcccccgggcaaggagtct
cccaccaaccacacgcccaagcgttcgcctccgtcctacaacgcccagggagggctgagg
aagaggaggaagggatccagcagtcagcacaggcctctgcccaacaagcctcaggacctg
caggtccgcgtgcgggtcatcgaggggcgacagctgccgggcatcaacatcaagcctgtt
gtcaaggtgacagtcgctgggcagacgaagaggacccgcatccgaaaaggaaacaaccct
gtgtttgatgagactttcttcctgaacttctttgagactccatcagacttgtttgacgaa
cccatcttcatcactgtgtgcgactctcgctctctccgaactgacgctgtgatcggtgaa
ttcaagttggatgtcggcaccgtctacaatgagcacagacactgcttcttgaggaagtgg
ttgctgctgtgcgaccctgacgacctctccgcgggggtcaaaggttacctgaaggtcagc
ctgctcgtcctggccgccggagacgagcccccggctgataaacgcgagtgtgtggaggac
aaagaggacatcgaaggaaacctgctgaggccggcgggtctgtccctgagaggagccgcg
ttcaccctgaggatcttcagagccgaagacctgccgcagatggacgacgccttcatggac
gggatgaagcacatccttgggttcgacagcaacaggaagaacttggtggaccctctggtt
gagatccacttcgccggcaaaacaatctgcacgaagattctggagaagaacgccaaccct
cagtggaaccagagtctggccatgcccataagatttccctccatgtgtgagaagatgagg
atcaggattctggactgggacagagccagtcacaacgacgtcatcggcaccacccacctc
tgtatgtctaagatctccgcccctggaggagagatagatgatgacttgactccacggacc
gtccaacctggcatcgacgacagtcttggtttcctgccgacattcggcccgtgtttcgtg
aacctgtacggcagcgccagagagttcaccgccttcagcgacccgcacgagaatctgaac
ctcggaaaaggggagggtgtggcgtaccgaggacgagttttagttgaactaaccacaaag
ctggcggacaaaccggagcagagaactgaagacatcccatcagacgacctgctggtggtg
gagaagtttctccggaagaggaagttctcgctctttgtggcgttttactcggccacgctc
ctccaggacgtcgacgatgccatccagttcgaggtcagcatcggtaactacggcaacaag
ttcgactacacctgcctccccctggcctccaccacccagttcagcagggccgtgtttgat
ggttgtcactactactacctcccgtggggaaacgtgaagccggtggtggtggtgtcttct
gagtgggaggacatcaaaccgaggatcgaggctctcaacatgttgctgagcatcatcgac
agactggaggccagcctgcagcaggtgcagctggaggtgaagacaggaagtgacctggag
gacctggagcagcgagtggtggagctgctggatcaggtgatcacagactgcagtgaggag
ctgccctctctcgcccagtggcagtgtgcgactccactggaccggtcgctgaggcacatc
cgcacgctgcacctgcagcagatcgtcgcagccgcgctcgccctcaaacacgggccggcc
acggacctgtccacggtgctggagcaggcggaggactgggccagccggctgcggaccatg
gccgaggagcctcaaaacagcctcccggacatcgtgatctggatgctgcagggcgaccgc
agggtggcttatcaccgcatcccggcacacaccgtcatcttctcccaggagcattgtggg
aaacactgcggacagctgcagactgtcttcctcaagtacccgcagggcagcggtgcagag
gccaaacttcctggtcagctgagagtcaaactctggttcggtttggctgcagacgtcaaa
catttcaaccagttcgccgaagggaaactgtcggtcttcgctgaaacgtatgagaaccag
actcgactcgccctggtgggcaactggggaactacaggcctgacctaccccaagttcagc
gacgtcacaggaagagtgaagctgccaaaggagagtttcaaaccgtcgcccggctggacc
tgggccggggactggtacatcagccccgagaagactatgctgtttgaggcggacgccggt
cacatgaccttctcagaggaagtgtttgaaaaccagatgaggttaccaggcgggcagtgg
atcggcatgccggagggatacaccgacgtgaacggagagaaggcggtgccaaaggacgat
gtggagtgtcctccgggttgggcgtgggaggaggaggagtggagtgaggatctcaacaga
gccgtcgacgatcaaggctgggagtacggtatcaccatccctccagaccgccgccccaag
tcgtgggtgccggcagagaagatgtaccacaccaaccgacgcaggcggtgggttcggatg
agacggcgagaccaacagaagatggaggctctcagaaagcagcgtccggacgaggcggac
cgcgagctctgggagtacgcgtcgctgttcggctggaggttccacctgaaacccaggaag
acggacagcttcaggcgccgcaggtggaggtgtcgcatggagcctctggagaagacgggc
ccggccgccatctttgctctggagtgttctctgagcagcatagaggacaagagcgaagac
aggtcgatcacgaccacgttcggagtcaacagacccaccatttcctgtttctttgacagt
ggcagccgctatcacctgcgttgttacctgtaccaggccagagacctgttggccatggac
aaggacagtttctcagacgcgtacgccgtcgtgtcgtacctccaccagtcccagaggacg
gtgacggtgaggaacactttgaatcccatctgggaccagacgctcatcttctacgagctg
gagatctttggtgaccccgaagccatgatggccaacccccccaacgtcgtcgtggagctt
tacgatcaggatacatacggtgcggatgaatacatgggccgctgcgtgtgccagcccacc
gtgactccctccccccgtctcacctggttcccagttcgccaagggggcaagaacgccggc
gagctgctggccgccttcgagctcatacgcagggaaaagccatcggttcatcatattcca
ggtcaagagggtggagacatcacgacgtccacacatgttctagacgagttgatgttctcg
gggttcctcactgaaaacctgcagcaatggccggaggagtcggaccttccgtacctgcct
cctcagagagagcccaacgtcttcatggttcctcaggggatcaaacctgttctgcagaga
accgccattgagatcttagcgtggggcgttcgtaacctgaagagcttccagttggccagc
gttacctccccgagcctgcaggtggagtgtggaggcaccatggtccagagctgcgtcatc
cgcagtgtgaagaagaagcccaactttgacgtcaataggctcatccttgatgtgagactt
ccgcgcgaggagctctacatgccgccgatcgtcatcaaggtcatcgacaaccgtcagttc
ggcaggaagccggtggtcggccagtgcaccatccggctgctggaggagttccggtgcgac
ccggaggaggaacgagcagcggcggaggaggagagtgagcaggacgggtggagacgtgag
acgcctcattccatctctggggaggtttttgttgacatcgatgatgaggagccgctggtg
ccggaccagtttgcagatggaacctgttcagctatcattaacctttcagcctctagctcc
agcctccatacggttccgtggggggaggagttcatggactggtggagcaagttctacgcg
tcgaccggagagaaaaacaagtgcgggacgtatctggagaaaggcttcgacacactgaag
gtgtttgagcgggagctggagaaggtcgagggttacgggggtttgtctgatttctgtcag
acgttcaagttgttcagaggaaagactcaggacgaaggagaagatccgtcagtggtcgga
gagttcaagggcatgtttaagatctaccctctgccagacgacccctccgcctctgctcca
cccaggcagttcaggaaacttcctcccaacggcatcgaggagtgtttggtccgagtctac
gtcatcgaggctcaggggctgcagcccaaagacaccaacgggaagtgtgacccttatgtg
aagataactctggggaaaaagaccgtcaacgaccacgataactacatcccctgtaccctg
gaccctgtgttcggaaagatgtttgagttcccgtgctccctccccgtggacaaggacctg
cgggtgatggtgtacgaccacgacatgctgaccaaagacgagaagatcggggagacggtg
atcgacctggagaaccgcttcctgtccagatacggagccctgtgcggcctgccgcagtcc
tactgcgtgtcgggggtgaaccagtggagagatcagctgacgccccgacagctgctgggt
cgagtgtgtgagcgacgaaacctccggaaaccggtttaccaggacgactgcgtcctcttc
agaggagacagacacacggccgcagacctcgacgacaaaaatgagtgtaagcgtcacctc
ggtccactgaaggagcgactgtcgctccacatcctgaggaaactggggctggtacctgaa
catgtggagacccggcctctgtacaacccgttacaacctgacatagagcaggggcgtctg
atgatgtgggtggacctgttccccaagtccctgggcccccccggaccgccgttcaacatc
acgccacgcaaggctaagaagtttttcctgcgttgcgtcatctggaacaccagtgacgtc
atcctggatgatgtcagcatcagtggcgagaggatgagcgacatctacgtgaaagggtgg
ctcgacggtcacgaacacatcaagcagaagaccgacgtccactaccgctctctgggcgga
gagggaaacttcaactacaggttcctgtttcccttccactatttaccagcggagcagctg
tgtgtcgtggacaagaaggaacatttctggagcgtcgataaagccgaaaccaaactggct
ccgaaactcaccgtccagatctgggacaacgacaagttctccttcgacgactacctcggt
cacctggtgtttgatctgaaccacatgctgcgtccggcgaagtctccggagaaatgtgac
ctgcagctgctgcagcagtcgagcgagcggctggtgtcgctgttcgagcagaagaccgtc
aaaggctggtggccgtgcacctgcgagaagaacggcgagaagatcatcgctgggaaggtg
gagatgtcgctggaggtcgtgacggagcaggagcaggacgagagaccggcgggccacggc
agagacgaacccaacatgaacccacacctggaggagcctcagcgtcctgagacctccttc
ctgtggttctcctccccgtttaagacgctcaggttcatcctgtggagacgcttcaagtgg
ttcatcctactcttcatcatcttcttcttcatcatcctcttcttcggcgtcttcctctac
gccttcccgaactacgctgcgatgaagatggtgggaccgttcggaccggccaaagctgct
gagtga
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