Hippoglossus stenolepis (Pacific halibut): 118102888
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Entry
118102888 CDS
T08308
Symbol
fga
Name
(RefSeq) fibrinogen alpha chain isoform X1
KO
K03903
fibrinogen alpha chain
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118102888 (fga)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118102888 (fga)
00536 Glycosaminoglycan binding proteins [BR:
hsp00536
]
118102888 (fga)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118102888 (fga)
Glycosaminoglycan binding proteins [BR:
hsp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118102888 (fga)
Hyaluronan
Extracellular matrix or blood plasma proteins
118102888 (fga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
Fibrinogen_aC
Motif
Other DBs
NCBI-GeneID:
118102888
NCBI-ProteinID:
XP_035005365
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All DBs
Position
23:3938664..3962765
Genome browser
AA seq
751 aa
AA seq
DB search
MSRRPHNAASSSIEVAQLMDVTPDAGESLVLWKLNLEALNEATPTLENHSATEAKMKPLQ
LLVCLGLVCVVASTLPFDPRGSRPVEPGTRSETCASQKEWPFCTDEDWGRKCPSGCRIQG
LMDKYDHKLVRKVEKIRSILDENRVRHRSTDQVSKQTYDYLKDKLTIDSGHGSNYYDLAQ
SLRQRINEMKIKIDRQLRLLGALKDRVKDQVVEMQRLEVDIDIKLRSCKGSCSSYSEHEV
DKEGYVELNKQINQLDSRSAQNIQSAGTLYVMKSRLMKDVHVDSIFKSASGPTTGAQQTQ
DIFADVKNIQLILESEGSSASPATITKDPGTSYSKSTTSSSSSDSSSSSKSITEHRGDGS
LFGEGFGGHSQPSTGHTTTKTISCTKSIKRTIVQTRDGPVEKVEEVIEGGPECRAMAAST
KPGMSSIFPTFGHSSSGHSSSGHTSSGHTSSSSSITTQTHHAGGAKGSITEDTKPGFMNL
FGSDIGGFMTDNPEQDHPDVHARSVKSARVQRQADYVGKDCVEAHQNHLNGETNGLFKIK
PGGTDSMGLVAVYCQQEGPMGGWLLVQQRESGALSFNRTWAEYRDGFGSVDAQGKGEFWL
GNQNLHLLTNQGETMMQVELEDWDEGVATAEYTVRVGSEGEGYALHVSGYTGDAGDGLVM
PKSDVSHNGMKFSTFDTDNDRGEENCAAMYGGGWWYNNCQSVNLNGIYYKGTYDPEKNTP
YKVENGVVWVTYKPTNYSLKSVKVFIRSTGF
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcgtcctcacaatgctgcctcctcatcgatcgaagttgctcaacttatggat
gtgaccccggacgctggtgagtcattggttttgtggaaactgaacctcgaggctttaaat
gaagcgacgccgactctggagaatcattcagcgacagaagccaagatgaaaccgctccaa
cttctcgtctgcctgggtttggtctgtgtcgtggcgtccacgctgccgtttgacccgaga
ggatctcgtccggtggagcccggcaccaggtccgagacttgtgccagtcagaaggagtgg
cctttctgcacagacgaagactggggccgcaaatgcccgtcaggctgcaggatccagggt
ctgatggacaaatacgaccacaaactggtgaggaaggtagagaagatccgcagcatcctg
gacgagaacagggtcagacaccgttccaccgaccaggtgtccaaacagacgtacgactac
ctgaaggataaactgaccattgactcaggtcacggcagcaactactatgacttggcccag
agtctgcgacagaggatcaatgagatgaaaatcaagattgaccgacagctgaggctcctc
ggcgccctgaaggaccgagtcaaagaccaggtggttgagatgcagcggctggaggtggac
atcgacatcaagcttcgttcctgcaaaggttcctgcagcagctactcggagcacgaggtg
gacaaggagggctacgtggagttgaataaacagattaaccagctggactccaggtcggct
cagaacatccagtcggcagggacgctgtacgtgatgaagagcaggctgatgaaggacgtg
cacgttgacagtatcttcaagtcggccagtggccccacgacgggagcacagcagacacaa
gatattttcgctgatgtgaagaacatccagttgatcctcgagtcagaaggctcctccgca
tccccagcaaccatcaccaaggacccaggtacttcctactctaaatctactacatcatcc
tcctccagcgattcctcctcctcctcgaaatccatcactgagcacagaggcgacggaagt
ttgtttggtgaagggtttggaggccacagccaacccagcacgggccacacgaccaccaaa
accatctcctgcaccaagagcatcaagaggacaattgtccaaacgcgtgacggaccagtg
gagaaagtggaggaggtgatcgagggaggccccgagtgtcgtgctatggccgcctctacc
aagcccggaatgagctctatattccccacctttggccatagctcctccggccatagctcc
tctggccatacgtcctctggccatacctcctctagctcatctataaccacccagacgcac
cacgccggtggcgctaagggaagcatcacagaagacaccaaacctggattcatgaattta
tttggttctgacatcggtgggttcatgacagataacccggaacaggaccatcctgacgtc
cacgcccgaagtgtgaagagcgcgcgtgttcagcgacaagctgattatgtaggaaaagat
tgtgttgaagcccaccagaaccacctgaacggggaaacgaacggcctgtttaaaatcaaa
cccggcggcacggactccatgggtttagtggcggtttactgccagcaggagggtccaatg
ggtggatggttgttagtccagcagagggagagcggcgcgctcagcttcaaccgcacctgg
gccgaataccgcgacgggttcggttcagttgacgcgcagggaaagggggagttttggttg
ggcaaccagaacctccacctgttgactaatcagggcgagaccatgatgcaggtggagctt
gaggattgggacgagggagtagcaactgccgagtacacagtcagggttggttctgagggg
gaggggtacgcgctgcacgtatctgggtacacgggggacgccggggacggtctggtgatg
ccaaagtctgacgtgtcacacaacgggatgaaattcagcaccttcgacacagataacgac
aggggggaggagaattgcgcggcgatgtacgggggcgggtggtggtacaacaactgccag
tcggttaacctaaatgggatctattacaaaggcacatacgacccagagaaaaacacgccg
tataaggtggaaaacggagttgtgtgggtgacgtataaacccactaactacagcctgaag
agtgtgaaggtgtttatccgatcaactggtttttaa
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