Hippoglossus stenolepis (Pacific halibut): 118102959
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Entry
118102959 CDS
T08308
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118102959 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118102959 (taf6l)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118102959 (taf6l)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118102959 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
118102959 (taf6l)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
118102959 (taf6l)
STAGA complex
118102959 (taf6l)
TFTC complex
118102959 (taf6l)
SAGA complex
118102959 (taf6l)
SLIK complex
118102959 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
118102959
NCBI-ProteinID:
XP_035005493
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All DBs
Position
23:15822693..15830634
Genome browser
AA seq
644 aa
AA seq
DB search
MADREERRFAEIPRESVKFMAESSGVELGDDVAALLAEDVCYRLREATQSSSQFMRHAKR
RKLTVEDFNRALHWSNVEAISGYGAQDALPFRSVKEGELFFVEDREINLVELALATNIPK
GCAETMVRVNVSYLDGKGNLDHQGTVPTAVQSLSDDLLKYYQQITRAILGEDPHLMKVAL
LDLQSNSRMAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSLSQSAEGGSSGQTGSVVGAMGHRVSSPGLSPPPEPLSEATLGIA
SHLQAGGAGCPWEEWTPVPLPAMYCELYSFFGDSLAVRFSTGPGFGSYPPCTRFQLRDTR
KEPPGHASNPDTTRKMPQLTANLNISPRHDGSPRTDPAPPSLAATGATRSLTRSSSSSSS
SVQRSRSSSSRPGQRSAGLSRDVFPKARFTSPQASPPAITFLIGGRQMGRRCQGRRPFQT
TFAPTPPLSAIPPRAYAHKLPVIGRVGKPVRRWTCSHYSLHLPL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgggaggagcgccgcttcgccgagattccccgagagtctgtcaagttcatg
gcagagagttcaggcgtggagctcggcgacgatgtggctgctctgctggctgaggatgtg
tgctaccggctcagggaggcgacacagagcagctcccagttcatgagacacgccaagagg
aggaagctgacagtggaagattttaaccgagctctgcactggagcaatgtggaggccatc
agtggctacggggctcaggatgccctgcctttccgctcagtgaaagaaggtgagctgttc
ttcgttgaggatcgggaaatcaacctggtggagttggctctggccactaacattcccaaa
ggctgtgctgagaccatggtacgagtgaacgtgtcttacctggatgggaaaggcaacctg
gatcatcaagggaccgttcccactgcagtgcagtccctgtcagacgacttgttgaagtac
taccagcagatcactcgggccatcctgggagaggacccccaccttatgaaggtggctctg
ctggacctccagtccaactccaggatggctgccttactaccatactttgtctatgtcatc
agtggggtgaagtcagtcagccatgacctggagcagctcaacagactcctccacatggtg
aagagcctggtgcagaacccctacctgtacctgggctcgtacgtccggagtctggtctcc
agcgtcatgtactgcatcctggagccactagctgcttccatcaacccgctcaacgaccac
tggaccctcagggactatgctgcgctgctcctcagccacatcttctggacccacggtgac
ctggtgagtggtctctaccaccagatcctgctgtcgctacagaaggtcctgtctgatcca
gtgagaccgctctgctcccactatggagccgtggtggggcttcatgctcttggatggaaa
gcagttgagcgagttctctttccacaccttcctgcctactgggccaacctccaggctgtg
ctagacgattattctgtttccaacgctcaggtcaaagcagatggacacaaggtctatgga
gccatcctggtggcagtggagcgcctgctgaagatgaaggctctgtccctgtctcagtct
gcagaggggggctccagtggtcagacaggctctgtggtgggtgctatgggtcacagggta
agctcccctggactcagcccccctccagagcctctgtcagaggccacccttggaatcgcc
agccacctccaggctggaggggcgggctgtccctgggaggagtggaccccggtccctctc
cctgccatgtactgtgagctctactccttctttggagacagcctggctgtcaggtttagc
actgggccagggttcggcagctaccctccctgcacccggttccagctcagagataccagg
aaggaacctcccggccacgcctccaaccctgacaccacccgtaagatgccacagctgact
gctaacctcaacatcagccctaggcacgatgggagtcctcgcaccgacccggccccacct
agcctggctgctacaggagcaacaaggtccctgactcgctcctcctcctcctcctcctct
tctgtccagcgctccagatcttcctcgtcacgccccggtcagcgctcggcaggactgtct
cgtgacgttttccccaaagctcgtttcacatctcctcaggccagccctccggcaatcacc
tttctaatcggtggtcggcaaatgggccgacgttgtcaaggccggcgccccttccagacc
acttttgccccgactccacctctctctgccatcccaccacgtgcctacgcccacaaactg
cctgtcatcggcagggtgggcaagcctgtgcgccgctggacatgttcccattactctctt
cacttgcctctgtag
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