Hippoglossus stenolepis (Pacific halibut): 118102984
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Entry
118102984 CDS
T08308
Name
(RefSeq) F-box only protein 41
KO
K10316
F-box protein 41
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118102984
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118102984
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_FBX41
F-box-like
DUF6825
F-box
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
118102984
NCBI-ProteinID:
XP_047194757
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Position
23:3686932..3695219
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AA seq
830 aa
AA seq
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MSSSSFSSSSSSSSSSELPYFCPRCGDKFRFSSVPELRAHLVSQHTYETLLVLSQTRVRS
SRPGVLLPLPSPTVAQRQSFSLGMEARSIPLQLACLDLASSSASIKLLRELFSSSDLAPP
AASTGRPEDPLTALAVPGTLEPYHGKELGEVLELRLSVGIGLEERLGLGLDRKIAQTFAE
VEERLNRRMGRLKVALQTREAELERERREGERLRSEKQEVEERAAYLSRQVSAAVEMTER
IKKDLQGKEKELNEQQQDMVDIERFLRETAEKEAEAKSRLQMFIETLLERADRAERQLLQ
LSSHTHHNQYTHHNDRYTHTDVYADPYTLAEVYTPGPGRRGRSLDGSSDSIITDKMQGTI
GNRRSYSVSDSCRLDEQPHSLPHYSRLSGGMRTSSLGLGGWDCEGGSVQHQPRHYPQPWT
RQERFWVGDGGCARTWSNRNRRHHSTEEEEEEEEDDDDEDERCWSSADMRRLVFARTHTP
GSDIPSSIGSTPSRCHADRQLGADTLRLRAGLFCVFPYLDVHSLLCAAAVCTDWRFVARH
PAVWTRLRLENARVSPEFLITMSQWCTQTQTVVLNYLKPRGRRANETREDYHRSTRGSLE
SGVEALLRSAGGSLLHLSVSQCPHILTDRTLWLASCYSRNLHTLTYRSSSDPLCQEVLWA
LGAGCRNISSLQVAPAEPCQQPTRFGNRCLQTIGRCWPHLCSLSVGGAGCGTQGLAAVVR
TCAHLQVLELECITDLGLQVATELCDAGLKSLQTLILTHTPVSGQAILHFHSVCDNLRSI
LVEVSASDYFEEPDTEEARHLFGEILSTLKVLQQRPGLCEVLQVKAEGFC
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcctccttttcctcttcctcttcctcctcctcctcctcggagttgccctac
ttttgtcctcgatgtggcgacaagtttcgattttcgtctgtacccgagctccgggctcac
ctggtcagccaacacacgtatgagaccctgctggtgctgtcccagactcgggtcagaagc
tccagaccgggtgttctcctcccactgcccagccctactgtagcccaaagacagagcttt
tctctgggtatggaagcccggagcatccccctgcagctggcctgcctggatctggcctcg
tcgtcggcctccatcaaactgctgagggaactgttcagctcctcagatctcgctcctcct
gcagcctccacaggacgtccagaagaccccctcaccgctctggccgtgcccggcactctg
gagccttatcatgggaaggaacttggcgaggtcctggaactccggctgtcggtggggatt
gggctggaggagcgactgggactggggctggaccgtaaaattgcccagacattcgcggag
gtggaggagaggctgaaccgccgcatgggccgactgaaggtggcgctacagacaagggag
gcggagctagagagggagaggcgggaaggggaacgactgaggagtgaaaaacaggaagtg
gaggagagggcggcgtacttatccagacaggtctcggctgccgtggagatgacggagcga
ataaagaaagatctgcagggaaaagagaaggagctgaacgaacagcaacaggacatggtc
gacatcgaacgttttctgagggagacagcggagaaagaagcagaggccaaaagcagactg
cagatgttcatcgagacgttgctggaacgagccgaccgtgcagagagacagttactgcag
ctcagctcacacacgcatcacaatcagtacacgcaccacaacgacagatacacacacaca
gatgtgtacgccgacccgtacacactcgcagaggtttacacacctggacctgggcgacga
ggccgcagcctggacggcagcagtgacagcatcatcacagacaagatgcagggaaccatc
ggcaaccggaggagttacagtgtgtccgactcctgcagacttgacgagcagcctcacagc
ctccctcactacagtcgtctctcgggggggatgcggacctcgtcgctgggtttggggggg
tgggactgtgagggggggtcggtccagcaccaaccccgtcactacccccagccctggacc
cgacaagagagattctgggtcggggacggaggatgtgctagaacgtggagcaacagaaac
cgtcgtcaccacagtactgaagaagaagaggaggaggaggaggacgatgatgacgaagac
gagcgatgttggagcagcgctgacatgaggaggctcgtatttgccaggacacacacacct
ggttcagacatcccctcctccataggctccaccccctcccgttgtcatgccgacagacag
ctgggggcggacaccttgaggctgagagccgggcttttctgtgtcttcccatatttggac
gtgcactcgttgctgtgtgcggctgcggtgtgcactgattggcggttcgttgccaggcac
ccggcagtttggacacgcctccggctggaaaacgccagagtgtcgcccgagttcctgatc
accatgtcccagtggtgtacgcagactcagactgtggttctcaactacctgaagccacga
ggcagacgagccaatgagacgcgagaggattaccacaggagcaccaggggcagtctggag
tcgggggtggaggctctgctgcggtcagcagggggcagtctactccacctgtctgtctct
cagtgtcctcacatcctcaccgaccggacgctgtggttggccagctgctacagccgcaac
ctgcacacgctcacatacaggagttcttcagatcctctctgccaggaggttctctgggcc
ctgggcgccggctgcaggaacatcagcagcctgcaggtggcgccagctgagccctgccaa
caacccacacgatttggaaaccgttgcttgcagacgattggtcgatgctggccacacctc
tgctccctcagtgtgggcggggccggctgtgggactcagggattggctgctgttgtgcga
acctgcgctcacctgcaggtgttggagttggagtgcattaccgatctcggcctgcaggtg
gcgacagagctgtgtgatgccggactgaagagtctacagactctgatcctgacacacaca
cctgtcagtggtcaggccatcctgcacttccacagcgtgtgtgataacctcaggtccatc
ttggtcgaggtctcagcgtcagattacttcgaggagccggacactgaggaagctcgacac
ctatttggagaaattctcagcacattaaaggttcttcagcagcgtcctggactgtgtgag
gtcctgcaggttaaagctgaaggattctgctga
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