Hippoglossus stenolepis (Pacific halibut): 118103013
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Entry
118103013 CDS
T08308
Symbol
zgc:113307
Name
(RefSeq) lumican
KO
K08121
fibromodulin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118103013 (zgc:113307)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hsp00535
]
118103013 (zgc:113307)
Proteoglycans [BR:
hsp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
118103013 (zgc:113307)
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
118103013
NCBI-ProteinID:
XP_035005549
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All DBs
Position
3:18057220..18062631
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AA seq
366 aa
AA seq
DB search
MALFCCAVVVLLCVVHSASATVVAETDYGGVPLWIDRMLGEPSVLSLQGRMNPAWFRANN
PQTCPEQCDCPIQWPTALYCDHRGQADIPDDLPDTTQYLFLQHNNISSLSSSVLVNITEL
RWLILDHNQLTSETLDRASLQNQTQLCYFFANNNHLTSVPDVLPAGLRQLRLAHNQISSI
RPGAFQKLHNLTLLLLQGNRLQTITEGDFRGLISLNLLHLGGNLISSLPRHLPSSIQQLY
LSNNSLSGLDNGSFTGLLKLKYLRLSHCGLQSGGVHPWVFNLSSLVELDLSYNKLTTIPT
VPSSLQYLYLEANEIQEFNMTSFCREVGPLSYSRMKILRLDGNKMSYHQMSSDLIYCLRE
LESIHI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggctctcttctgctgtgccgtggtggtgctactgtgtgttgttcactctgcttcggcc
actgttgtcgccgaaacggactacggaggggttcctctgtggattgaccgcatgctgggt
gagcccagtgttctgagcctgcaggggcggatgaacccagcctggttccgagctaacaac
ccgcagacctgccctgaacagtgtgactgccccatccagtggcccacagcgctctactgt
gaccacagaggccaggcagacatccctgacgacctgccagacacaactcagtaccttttt
ctacagcacaacaacatctcgtccctgtcctcctctgtactggtcaacattaccgagctc
cgctggctcatcctggaccacaaccagctgacgagtgagacgctggaccgggcctccctg
cagaaccagacccagctgtgctacttttttgccaacaacaaccacctgacttctgtgccc
gacgtgctaccagcaggtctcaggcagctgcgactggctcacaaccaaatcagcagcatc
aggcccggagctttccagaagctgcacaacctgacgctgctgctgctgcagggaaacaga
ctgcaaaccatcacagagggagacttcagaggtctgatcagtctgaatctgttacacctc
ggtggaaatttgatctcgtccctcccccgacatttaccttcgtccatccagcagctctat
ctgtccaataactctttatctgggctggacaacggcagtttcaccgggctcctcaagctt
aagtacctgcgtttaagtcactgtggtttgcagagtggcggtgtccacccgtgggtcttc
aacctctccagcttggtggaattggacctttcttataacaaactcacaaccattcctaca
gttcccagcagcctgcagtacctctacctggaggccaatgaaatacaagagttcaacatg
accagtttctgcagagaggtgggacctctgtcctactccaggatgaagatcctgcgattg
gacggaaacaaaatgtcctaccatcagatgtcctctgacttgatctactgcctacgggag
cttgaaagtattcacatctga
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