Hippoglossus stenolepis (Pacific halibut): 118103153
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Entry
118103153 CDS
T08308
Name
(RefSeq) SLIT and NTRK-like protein 1
KO
K25832
SLIT and NTRK-like protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118103153
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_LRWD1
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
118103153
NCBI-ProteinID:
XP_035005662
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Position
24:complement(11020075..11025123)
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AA seq
704 aa
AA seq
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MLLWIVLLNAALCVASGNVTKDVCKEQICSCNDVEGDLHIDCEKRSFTTLQHLTGPSSQF
YHLLLHGNSLSRLFPNEFANFYNAVSLHLENNGLHDIVPGAFLGLQLVKRLHINNNKIRS
FRKSTFLGLDDLEYLQADFNLLRDIDPAVFRDLNKLEVLILNDNLISALPINVFQHVPIT
HLDLRGNRIKTVPYEGILEQIPGIAEVLLEDNPWDCNCDLASLKEWLENIPHNALIGRVI
CEAPTRLQGSDLNETSEEDLCPSQSGGVDTSLVAPPTQEETSVTVARGPRPTPYKPSGNA
SGPPTPGGHGAKSRSKSRENWQLKTKPTPVGTGVSGEREQLHNITCPQPCNCKLVGSRQG
LGVNCEGKKIESLANLKPRPLVAHELNMRDNNIHGVKKNQLLAYSSLNQLDLGGNNIKMI
DNGTFQNQSELRWLYMDKNYLDTLLAEMFVGLVNLEYLSLEYNDIQLIVAGAFGPMPNLR
VLLLNNNLLKALPVDAFLGISLSKISLHNNYFPHLPVAGVLDQLNSIIQIDLHGNPWDCS
CNIVPFKQWTEKLGAEVIVGDLKCESPEEFWKRDFRFVRNDLMCPRLYDRIAPTTLSKNS
TFTLDSGTRSNSYLEPNRVSISVLVPGLLLVFVTSAFTVVGMLVFILRNRKRSKRREGNS
SASEINSLQTVCDSSYWHSGPYHADGGAHRGFDCSTHLSTTNDA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggatcgtcctgctgaatgcggctctttgtgttgccagtgggaatgttaca
aaggacgtttgtaaggagcagatatgctcctgcaacgacgtcgagggggatctgcacata
gactgcgaaaagaggagcttcaccacgctgcagcatttgaccggccccagctcgcagttc
taccacttgctgttgcacgggaattcactgtccaggctgttccccaacgagttcgccaac
ttttacaacgcggtgagcttgcatttggaaaacaacggcttgcacgacatcgtgcccggc
gcgttcctggggctgcagctggtgaagaggctgcacatcaacaacaacaagatacgatcg
ttcaggaagagcacgtttctggggttagacgacttggaatacctgcaagctgatttcaat
ctactgagggacatcgaccccgccgttttcagggacctaaataaacttgaagtgttaatc
cttaacgacaacctcatcagcgcgctacctataaacgtgttccaacatgtgcccattacg
catctcgacctgcgggggaaccgaatcaaaacggtgccttatgaggggatcctcgagcag
ataccgggcattgcggaggttttgctggaggacaacccatgggactgtaactgcgacctg
gcttctctgaaggaatggctggagaacataccgcataacgcgcttattggaagggtgata
tgcgaggcacccaccaggctgcaggggagcgacctgaacgagacgtcagaggaggatctg
tgtccttcacagagcggcggcgtggacaccagcctggtcgcccctcccacccaggaggag
acctcagtcacagtggcccgtggcccccgtcccacgccttacaagcccagcggaaacgcc
agcggcccgccgacacctggcggccacggagccaagagccgctccaaatctcgtgagaac
tggcagctgaaaactaagcccactccagtggggacaggtgtaagcggcgaaagagagcag
ctgcacaacatcacgtgcccccagccgtgcaactgcaagctggtgggctccagacagggg
ctgggggtcaactgtgagggcaaaaagatcgagagcttagccaacctcaagcccaggccc
ttggtagcgcacgagttgaacatgagagataacaacatccatggagtgaaaaagaaccag
ctgttggcctactccagcctcaaccagctggatctgggtggcaacaacatcaagatgatt
gacaacggcactttccagaaccagagcgagctcaggtggctttatatggataagaactat
ctggatacgctgctagcagagatgtttgtgggccttgtgaatctggaatatctcagtttg
gaatacaacgacatccagctgatagtggcaggcgcgttcggccccatgcccaatctgagg
gttctgctcctcaacaacaacttgctcaaggctttacctgtggatgcttttcttgggatt
tctttatccaaaattagcctgcataataattatttcccccacctccccgtggctggcgtc
ttagaccagctcaattcaatcatacagatcgatttgcacgggaacccctgggattgctcg
tgcaacatcgtgcccttcaagcagtggacggagaaactcggggccgaggtgatagtgggc
gacctcaagtgtgagtccccggaagagttctggaaacgagatttccgcttcgtccggaac
gacctcatgtgcccgagactctacgaccgcatcgccccgaccacgctgtccaaaaacagc
actttcaccctggactcggggacgcgctcaaactcttacttggagcccaacagggtctcc
atctcggtgctcgtccccgggttgctgttggtgttcgtcacgtccgcgttcaccgttgtg
gggatgcttgtctttattttgcggaaccgaaagaggtcaaagcggagggaggggaactcg
tccgcctcggagatcaattccttgcagacagtgtgcgactcgtcttattggcacagtggg
ccttatcacgcagacgggggcgcacaccggggcttcgactgcagcacgcacctctccaca
acaaatgacgcgtaa
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