Hippoglossus stenolepis (Pacific halibut): 118103174
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Entry
118103174 CDS
T08308
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
118103174 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118103174 (nhej1)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
118103174 (nhej1)
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Motif
Pfam:
XLF
XLF_CC
XRCC4
Topoisom_I_N
Motif
Other DBs
NCBI-GeneID:
118103174
NCBI-ProteinID:
XP_035005694
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Position
24:complement(7727505..7742125)
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AA seq
320 aa
AA seq
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MEVNGAPPDVLLQHPWLPVGISGCQLLAKIWFGDAAYHILLTDMSCVWEERMDSAAIQRR
SQELNRRLRAPVKAFFSHLCEVAQPCLSGSGERADGEAQISLTRREHDNISIRLKSELAE
LPFYWEFRCTPAPVTLVCAQLLRPLLAMSRLLQRQVGQLGGLLGKKDLEIQDYRENGATL
SRERLQTDVFEEQTYRENFISKALPLVCSEQQETLGFDDDLQQLYASIVAHGNARARKRK
LSEERSVQEDRPPTEERDLTPSLGVGSVSKTAERVGEQSHNRADATGAAMADGATVQQSF
DHPAGRPSSKPKKKKVGLFR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaacggagccccccctgacgtcctcctccagcatccctggcttcctgtgggc
atcagcggctgccagctcctcgctaagatctggtttggagacgcggcgtaccacatcctg
ctgactgacatgagctgcgtgtgggaggagaggatggactcagccgccatccagaggcga
tcacaggagctgaaccggcgtttgcgagccccggtcaaagctttcttctcccacctgtgt
gaggtggctcagccctgtctgtcgggaagtggtgagcgagccgatggcgaggctcagatc
tctctgacgcgacgcgagcacgacaacatcagcatcaggctgaagagcgagctggcggag
ctgcccttctactgggagtttcgctgcacccccgcccccgtcacactggtgtgtgctcag
ctgctgcgccccctgctggcgatgagccgcctgctgcagcggcaggtggggcagctggga
ggtctgctggggaagaaggacttggagatccaggactacagggagaacggagccacgctc
agcagagagcggctgcagacggatgtttttgaggagcaaacctacagagagaacttcatt
tcaaaggctcttcctctggtttgttcggagcagcaggaaactctgggcttcgacgacgac
ctgcagcagctgtacgcctccatcgtcgcccacggaaacgcacgtgcacgaaaacgcaaa
ctgtcggaggagcgctccgttcaggaggaccggccgcccactgaagaacgtgacctcacg
ccatccttaggtgtcgggtctgtcagtaaaacagctgagagggttggagaacagagccac
aaccgggcagatgcgactggagccgcaatggccgacggagccacagtccaacagtctttt
gaccacccagcagggcgaccgtcctccaaaccaaagaagaagaaagtcggactgttccga
tga
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