Hippoglossus stenolepis (Pacific halibut): 118103175
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Entry
118103175 CDS
T08308
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118103175
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRCT_2
LRRNT
Hepsin-SRCR
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
118103175
NCBI-ProteinID:
XP_035005696
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Position
24:complement(10507795..10514090)
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AA seq
875 aa
AA seq
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MHIWILKIILLIASSLRLVEMYDNYGEICRNLCTCEEKEGILTVSCENRGIIRLTEISPV
HFSMYHLLLTGNLLKKLSVNDFINYTGVTILHLGNNDISEVESGAFNGLQGLKRLHLNNN
KIEILRDDTFAGLESLEYLQIDYNYITNIEPNALSKLHQLTVMILNDNLLFALPPNIFRN
VPLTHLDLRGNRLKMFPYIGLLEHMDKVVELQLEENPWNCSCELIALKAWLESIAYTALV
GEVVCETPFRLHGRDLDEVSKQELCPRRPPEDTVRPAPPSSTNGYYQTTPASVTASATSS
AVFRSSSRPTKGTRQFNRTRVKPTSRLSGGNPHNYGPIIAFQTKSPVPLDCPTTCTCNLQ
ISEIGLNVNCQERKIESISDLKPKPYNPKKMYLTGNYIPVVRRSDFVDATGLDLLHLGNN
RITLIHDRAFGDLTNLRRLYLNGNLMDGLTGEMFFGLQNLQYLYLEYNKIKEVDEAAFRY
LPNLQLLFLNNNVLKTLPVGIFSSLSLSRLNLRNNHFQNLPVSGVLDQLKLLLQIDLFEN
PWDCSCDIVGMKIWLEQLSAGTVVNEIVCETPKRHTAVDLRSIQSEQLCPDYSDAYVSSS
TPTDEPMDDRVVTTAAPQKFNTPSSTVPLSVLILSLLLVFIMSVFVAAGLFVVVMKKRKK
SQSDRTSTNNSDVSSFNLQYSLYSNRSGPKVKAPASHVYEYIPHPMGHMCKNPIYRSREG
NTVEDYRDLHELKVTYRSTTDEERDGSTMRSPTYSVSTIEPRENPSPVQDADHFFRGILE
PDKQSPHQSIPSLPAGANLEFKYTGPVSYTYNPNFDVRRQFLHPERIRETVLYGTAPSTV
YVEPNRNEYLELKAKLQSEPDYLEVLEKQTTFSQF
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcatatctggatcctaaaaataatccttctgattgcatcatctctgaggctggtcgag
atgtatgacaattatggggagatctgtcgaaacctgtgcacatgcgaggagaaggaaggg
atcctgacggtgagctgcgagaaccgggggatcatcagattgacggagatcagccccgtc
catttctccatgtaccacctcctgctgacagggaacctcctgaagaagctgtcagtcaac
gatttcatcaattacaccggggtgaccatcctgcacttgggaaacaatgacatctcggag
gtggagtccggcgccttcaacgggctccagggattaaaaaggttgcacctgaacaacaac
aagatcgaaattcttcgggatgacacctttgcgggactggagagtttggaatatctgcag
attgattacaattacatcaccaacatagaacccaatgccttgagcaaactgcaccaacta
acagttatgatactgaacgacaacctactctttgccctgcctccgaatatcttccggaat
gttcccctgacacacctggacctgaggggaaaccggttaaaaatgttcccctacatcggc
ctcctggagcacatggacaaagttgtggaattacaactggaggagaacccgtggaattgc
tcctgcgagctcatcgctctgaaggcttggctggagagtatagcatatacggccctggtg
ggggaggtggtgtgtgagacgccgttcaggctccatggcagggacctggatgaggtatcg
aagcaggaactctgcccaagaagacccccagaggacacggtcaggcctgcgccccctagc
agcactaatggatattaccagaccacacctgcttctgtcaccgcctctgccacctcctcg
gctgtttttaggtcctcctccaggcctaccaagggcacgcgacaatttaacagaactagg
gtaaagcccacgtcccggttatcaggcggcaaccctcacaactatggccccatcattgct
tttcagaccaaatctcctgtgcctttggactgccccacaacctgcacatgtaatctgcag
atatctgaaattgggctaaatgtcaactgccaagagagaaagattgaaagcatttctgat
ctaaaacccaagccatacaatcctaaaaaaatgtatctcactggaaattacatccctgtg
gtgcggagatcagattttgtcgatgccactggattggatttgcttcacctgggaaacaac
aggataacactgatccacgaccgggcttttggggatttaaccaacctgcgtaggctgtat
ttaaatggtaatctcatggacgggcttacaggagaaatgttttttggtttgcagaacttg
cagtatctttatttagagtacaacaaaatcaaggaggttgatgaggccgctttccgttac
ctccctaacctccagctgcttttcctcaacaataacgtcctgaaaaccttacctgtgggc
atcttttccagcctctctctgtctcggctgaatctgcgtaacaaccatttccaaaacctg
cctgtgagtggtgtattagatcagctgaagctgctgttgcagatagatctgtttgaaaat
ccctgggactgctcctgtgacatagtggggatgaagatatggctggagcagctcagcgct
ggcactgtggttaatgagatcgtgtgcgagacgcccaaacgccacacagcagtggacctg
cgctccatccagtcggagcagctctgcccagactactccgatgcatacgtctcgtcgagc
accccgacggacgagcccatggacgaccgggtcgtcaccacagcggctccgcagaagttc
aacaccccgagcagcactgtccccctctctgtcctcatcctcagcctcctgcttgttttc
atcatgtccgtctttgtggccgcagggctgtttgttgtagtgatgaaaaagcgcaaaaag
tcacagagtgaccgcactagcaccaacaattcagatgtcagctcttttaacttgcagtac
agcctctacagcaaccgctccggcccgaaagttaaggccccggccagtcacgtctatgag
tatattccccaccccatgggccacatgtgcaaaaaccccatttacaggtcacgggaggga
aacacagtggaggattaccgtgacctccacgagctcaaggtcacatacaggagtaccaca
gacgaggagagggatggcagcacgatgaggagcccgacgtacagtgttagcaccatcgag
ccccgggaaaacccctcccccgtccaggatgcagaccatttcttccgaggcatcctggag
ccggataagcagtcgccccatcagtccatcccgtccctccccgcaggtgccaatttagag
ttcaagtacacggggccggtgtcgtacacgtacaacccaaattttgatgtcagacgtcag
ttcttgcacccggagaggataagagaaacagtgctctatggcacggcacccagtactgtc
tatgtcgagcccaatagaaatgagtatttggagctaaaagctaaactgcagtctgagccc
gattacctcgaagttctggagaaacagaccacctttagccagttctga
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