Hippoglossus stenolepis (Pacific halibut): 118103238
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Entry
118103238 CDS
T08308
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2 isoform X1
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118103238
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118103238
Ion channels [BR:
hsp04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
118103238
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF7536
Motif
Other DBs
NCBI-GeneID:
118103238
NCBI-ProteinID:
XP_047194991
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Position
24:2091314..2094383
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AA seq
448 aa
AA seq
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MSYFLSFLPSASFSSADGDFAVTHMTKAQLFHTGRVLWVPPAIYKSSCSIDVTFFPFDQQ
SCKMKFGSWTYDRAKIDLEPFENTVDLKDYWESGEWAIVNAVGTYNTKKYDCCHEIYPDI
TYYFVIRRLPLFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLIT
EIIPSTSLVIPLIGEYLLFTMIFVTLSIAITVFVLNVHHRSSATHTMPRWVRRLFLCSVP
RWLCMKRPHHDRRPVRRRRLTDRLLPVWTPGPPNITSTWITEESDIDLHGYQHDNGCHDS
HQLDSLDSGDEIHYCDIHGYSNLPRSGVKISGRSRISSLSPPSPPSPGYTLLQQRRSTLS
LDWDTPPVEHGLIQSPSGAVLSPAVVSALEGVTYIAEHLRAEDADFSVKEDWKYVAMVVD
RIFLWMFIIVCLLGTVGLFLPPWLSGMI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacttcttgagttttcttccttctgcttctttctccagtgcggacggagacttc
gccgtgacccacatgaccaaggcccagctgtttcacacgggccgcgtcctctgggtgccg
ccggccatctacaagtcgtcctgctccatcgacgtcaccttcttccccttcgaccagcag
agctgcaagatgaagttcggctcctggacgtacgaccgggccaagatcgacctggagccc
tttgagaacaccgtggatctgaaggattactgggagagcggagagtgggcgattgtgaac
gccgtgggcacctataacaccaagaaatacgactgctgccacgagatctacccggacatc
acctactacttcgtcatccgccgcctcccgttgttctacaccatcaacctcatcatcccc
tgcctcctcatctcctgcctgaccgtgctggtgttctacctgccgtcggactgtggcgag
aaaatcacactgtgcatctccgtgctgctgtcgctcaccgtcttcctgctgctcatcacc
gagatcatcccgtccacgtcgctggttattccgctgatcggggagtacctgctcttcacc
atgattttcgtcacgctgtcgatcgccatcaccgtgttcgtgctgaacgtgcaccaccgg
tcgtcggcgacgcacaccatgccccggtgggttcggaggctcttcctgtgttcggtgcct
cgctggctgtgcatgaagcgtccacatcacgatcggaggcctgtcaggcgaagacgccta
actgataggctcctccctgtctggacccctggcccccccaacatcacatctacctggatc
actgaggagtcggacatcgatctccatggttaccagcatgacaacggttgccacgacagc
caccagctggactccttggacagcggagatgaaattcactactgcgatattcatggttac
tcaaacctgccgaggtcgggggtgaagataagcggccgttcgaggatttcctccctctct
ccaccttcccctccatctcctggttacaccctcctccaacagagacgctccacactcagt
ttggactgggacacccctcctgtggagcatggtttgatccagagcccatccggcgctgtt
ctgtctcctgcggtggtgtcagccctggagggggtcacctacatcgcagagcatctgaga
gcagaggatgcagacttctcggtgaaggaggactggaagtacgtggccatggtcgtagac
cggatcttcctgtggatgttcatcatcgtgtgtctgctggggacggtcggactcttcctg
cctccgtggctctctgggatgatttag
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