Hippoglossus stenolepis (Pacific halibut): 118103304
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Entry
118103304 CDS
T08308
Name
(RefSeq) CLIP-associating protein 1-B isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118103304
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118103304
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118103304
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
118103304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
TOR1L1_N
Sec7-like_HUS
Cnd1
HEAT_GCN1
HEAT_DAAF5
ParcG
KH_DEAH11_1st
Paxt-1_C
Motif
Other DBs
NCBI-GeneID:
118103304
NCBI-ProteinID:
XP_035005969
LinkDB
All DBs
Position
24:complement(740759..767982)
Genome browser
AA seq
1580 aa
AA seq
DB search
MEEDQEVPAVSMDYLLEQAMHKDLGRRLQVGPDLLEIILDQERCPELEQDQSSLDRMVDS
VASSWVNSSNFKVVLLGMDILSALVTRLQERFRTQVGTVLPSLIDRLGDSKDQVRDQDQA
LLLKIMDQAANPQYVWERMMGGFKHKNNRTREGLCLCLISTLSVYGSQSLTLSKIVPHIC
NLLGDPTGQVRDGAMSCLIEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGDMV
LSPVSDKNFEEDDSVDAGRSSSSSKGASQSGKKTVSMGSFRRPPSASSAKSAGRDASAAG
AVDEDYIIQAFEDVPTVQIYSNREVDEAMTKIRDVLSDDKKDWELRVAALKKVRSLLLAG
APEFDGFLQQLRLTEAAFKLSAKDLRSQVVREACITLGHLSLVLGSRFDHAAEAVMPILL
NLVPNSAKIMATSGIAAVRLILRHTHYPRLIPIITSNCLSKSVAIRRRCFEFLDLLLQEW
HTSSLERHGTVLMETLKKGIHDADAEARSGARKCYWSFHGHFSREAEQLFQGLESSYQKA
LQAHLRSGDSPMSQPASDRSSSSSQESLNRPLPVKSSVGSSTNRSKPSHSSRTPAAAASP
GLQRSRSDVDVNAAASATARTRMTAVPSSSSPFSSASALPPGSYASLGRVRTRRTSSGNG
PSVTDSRGRSRGKVVSQSQPGSRSGSPGRLLSSGYGRIPRPAMGSAAANSTSGSLTDKSR
PRGHRSQGCSRETSPTRSAMARSRIPRPSMSQGCSRETSRESSRDTSPARGFSPLATRRH
SRSTSALSSAECYSDRLSHQARISASVDAMRILNTGTEVEAAVADALLLGDSRSKRRPVR
RRFESPGMYSDDDANSDASSACSERSYSSRNGGVGPHYLRQTEDVAEVLNHCASANWSER
KEGLLGLQNLLKSQRMLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIVLHRDDL
QDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRESFPYEQQFNILMRFIVDQTQTPNL
KVKVAILRYIEALARQMDPSDFVNSSETRLAVSRIITWTTEPKSSDVRKTLHNWAGEEFS
GRPSTVASLPGEGNLEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGTTKLLHNH
LRNASAHSGIVMASPSNSMGRPPPRQPGSRSSPLTSPTNCSHGGLSPSMLEYDSENLNSE
EIYSSLRGVTEAIQNFSFRSQEDLMEPLRRDGKRDGTSGFGASSDSDPRLGGDPVEGGRT
ALDNKTSVLNTPSPRSFAGPRFRDYNPYNYTDGISTLDKAALKEALYEDAVEQLRDGRRQ
ECVENKIQNPKPFPAGPAEQLELVGELLKELSQGQAGERGPEERRHTLLELLKVAREDSL
VVWDEHFKTMLLLLLETLGDKDHTIRALALRVLKEILRNQAPRFKNYAELTIMKTLEAHK
DSHKEVVRAAEEAASTLAGSIPPEQCIKVLCPIVQTADYPINLAAIKMQTRAIERITKEP
LHQLLPDIIPGLLQGYDNTESSVRKASVFCLVSIYSVIGEELKPYLAQLTGSKMKLLNLY
IKRAQTTTSNSSSSSDISSY
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaccaggaggtgcccgccgtcagcatggactatctgctggagcaggcgatg
cacaaggacctgggcaggaggctccaggtggggccggacctcctggagatcatcctggac
caggagaggtgtcccgagctggagcaggaccagagctccctggacaggatggtggactcc
gtggccagctcctgggtcaactccagcaacttcaaggtggttttgttggggatggacatc
ctgtcggctctcgtcactcgactgcaggagagattcaggactcaggttggaactgttctt
ccgagtctcatcgaccgactcggagactccaaggaccaagttcgagaccaggaccaagcg
ctgctgctgaagatcatggaccaggccgccaacccccagtacgtgtgggagcggatgatg
ggcggcttcaaacacaagaacaacaggaccagagaaggactttgtctgtgtctcatctca
acactaagcgtgtatggatctcagagtctgacgctgagtaagatagttcctcacatctgt
aacctcctcggagatccaacgggccaggtgcgtgacggcgccatgagctgcctcatcgag
atctaccgccacgttggggagcgagtgagaatggacctgggaaagaaaggtctgcctcag
tcaaggctcaacgtcatcttcagcaagtttgacgaagtccagaggtcgggggacatggtc
ctgtcgcctgtgtcggacaaaaactttgaggaagatgactcggtggacgccggccgctcc
tcgtcctcgtccaaaggagcgtcgcagtctgggaagaagacggtgagcatggggtcattc
cgacgcccgccatccgcctccagcgccaagtctgcagggagggacgcctctgcagccgga
gccgtggacgaggactacatcatccaggccttcgaagatgttcccacggtgcagatctac
tccaacagggaggtggacgaggccatgacgaagattcgagacgtgctgtcagacgacaag
aaggactgggagctcagagtggcggcgctgaagaaggtgcgctcgctgctcctcgccggc
gctccagagtttgacgggttcctgcagcagctgcgtctcacggaggcggcgttcaagctg
tccgccaaggacctccgctcccaggtggtgagagaggcctgcatcacactgggtcacctg
tcgctggtgctcggcagccgattcgaccacgctgcagaggccgtgatgcccattctcctc
aacctggtccccaacagtgccaagatcatggccacctccggcatagccgccgtccgcctc
atcctcagacacactcattacccacgactcatccccatcatcaccagcaactgtctctcc
aaatctgtggcgatccgaagacgctgcttcgagttcctggacctgctgctgcaggagtgg
cacacgagctccttggagagacatggaaccgttctgatggagacgttaaagaaagggatc
cacgatgccgacgccgaggctcgctctggggctagaaagtgttactggtcgttccacggt
cacttcagccgggaggcggagcagctcttccagggcctggagtcgtcctatcagaaagct
ctgcaggctcacctgaggagcggagacagccccatgtcgcagcccgcctccgaccgctcc
tcctcctcctctcaggagagcctcaatcgacctctgcctgtaaaaagcagcgttggaagc
agcacaaatagatccaaaccgtcccactcctccaggacgccggccgcagctgcctctccc
ggactgcaacgctctcgcagcgacgtggacgtcaacgccgccgccagcgctacggctcgc
accaggatgaccgcagtaccgtcgtcctcttctcccttcagctcggcctcggccctcccc
cccgggtcctacgcttctctgggtcgagttcgaacccgcaggacgagttcaggaaacggt
ccgtctgtgacagacagccgcgggcggagccgagggaaggtcgtctcacagtcccagccc
ggcagtcgctcaggttccccgggtcgactcctgagctccggctacggcagaatcccgaga
ccggcgatgggctcggccgccgccaacagcacctccggcagtctgaccgacaagagtcgc
ccccgaggtcaccgcagccagggctgcagccgagagaccagccccaccagatcagccatg
gcccggagtcgaatcccccgaccgagcatgagtcagggctgcagccgcgaaaccagtcgc
gagagcagccgcgacaccagccccgcccggggtttctcccccctggcgactcgccgtcac
tcccgctcgaccagcgctctgtcctcggcagagtgctactcagaccgcctgtcccatcag
gctcggatctcggcctcggtcgacgccatgagaatcctcaacaccggcaccgaggtggag
gcggcggttgcagacgcgctgctcttaggcgactccaggagtaagcggaggccggtgcgg
cggcgcttcgagtcgccgggcatgtactcggacgacgacgccaacagcgacgcctccagc
gcctgctcggagcgctcgtacagctcgcgcaacggcggcgtggggccgcactacctgcgt
cagacggaggacgtggcggaggtgctgaaccactgcgccagcgccaactggtcggagagg
aaggaggggctgctgggactgcagaacctcctcaagagccagaggatgctcagccgcgtg
gagctgaagagactctgtgagatcttcaccaggatgtttgcagaccctcacagtaagaga
gtcttcagcatgttcctggagacgctggtggacttcatcgtgctgcacagggacgacctg
caggactggctcttcgtcctgctcacccagctgctgaagaagatgggcgccgacctcctg
ggctccgtccaggccaaagtccagaaggctctggacatcaccagagagtcgttcccgtac
gagcagcagttcaacatcctgatgcgtttcatcgtggatcagacgcagacgcccaacctg
aaagtgaaggtggccatcctgcgctacatcgaggctctggctcgccagatggacccgtcc
gacttcgtcaactccagcgagacgcgcctcgccgtctcacgcatcatcacctggaccacc
gagcccaagagctccgacgtccgcaagacccttcacaactgggcaggggaggagttctca
ggccgacccagcacggtggcctctctgcctggggagggtaacctggaggagaggtgcaag
caggcggcccaggttgtgttgatcgctctgtttgagttgaacactcctgagttcacgatg
ctgctcggagctctgcccaaaaccttccaggacgggacgaccaagctgctgcacaaccac
ctgaggaacgccagcgcccacagcggcatcgtcatggcgtctcccagtaactcgatgggc
cggcctcctcctcgtcagcccggcagccgcagcagtcccctgacctcgcccaccaactgc
tcccacggaggactctcccccagcatgctggagtacgacagcgagaacctgaactcggag
gagatctacagttccctgcgcggcgtcaccgaggccattcagaacttcagcttccgcagc
caagaggacctgatggagccgctgaggcgcgacggcaagagggacggcacgtccggattc
ggggcgtcctcggactccgacccccggctcggtggcgacccggtggagggcggacgcacg
gctctggacaacaagacgtccgtgctgaacacgccttcgcctcgatcctttgccggcccg
cgtttccgtgactacaatccgtacaactacacggacggcatcagcacgctggacaaagcc
gccctgaaggaggcgctgtacgaggacgccgtggagcagctgagagacggccgtcgacaa
gaatgtgtggaaaacaagatccagaacccgaaacccttccctgcgggaccggccgagcag
ctggagctggtgggcgagctgctgaaggagctgtcccagggccaggccggcgagcggggc
cccgaggagcgccggcacacgctgctggagctgctgaaggtcgcccgagaggacagcctg
gtggtgtgggacgagcacttcaagaccatgctgctgctgctgctggagacgctcggagac
aaagaccacaccatccgagccctggcgctcagagtcctgaaggagatcctgaggaaccag
gcccctcgcttcaagaactacgccgagctcaccatcatgaagacgctggaggctcacaaa
gactcgcacaaggaggtggtgcgggcggcggaggaggcagcgtccacgctggcggggtcc
atccccccggagcagtgcatcaaggtcctgtgtcccatcgtgcagacggcggattatccc
atcaacctggccgccatcaagatgcagaccagggccattgaacgcatcaccaaggagccg
ctgcaccagctgctgccggacatcatacctggactcctgcagggctacgacaacacggag
agcagcgtgaggaaggccagcgtcttctgcctggtgtccatctactctgtgatcggcgag
gagctgaagccgtacctggctcagctgaccggcagcaagatgaagctcctgaacctctac
atcaaacgagcccagacgaccaccagcaacagcagcagctcctccgacatctcgtcctac
tga
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