Hippoglossus stenolepis (Pacific halibut): 118103381
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Entry
118103381 CDS
T08308
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X2
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118103381
Membrane trafficking [BR:
hsp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118103381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_1
SH3_2
Spectrin_SESTD1
PH_10
CRAL_TRIO
hSH3
UreE_C
Spectrin
Motif
Other DBs
NCBI-GeneID:
118103381
NCBI-ProteinID:
XP_035006149
LinkDB
All DBs
Position
24:complement(5328705..5369676)
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AA seq
1216 aa
AA seq
DB search
MGEIERAFGNTNEEESGMRRVRFFSLVEDMKTAREEEESRRRDERKGGKRGFGGERLVSI
SLEEMESYYRYALCCRQLYNDIMHGEDGPLCAAEIGSELQKQFAILPGGRGINGRPIMVF
PEFPEFSELEEEELQSVLRYLTSVPSVAASGVGFILVIDRRLDRWAAVRATLLRIAGSFP
GNLHLVLVLRPTTLLQRTLSDFLFKFNRDEFKMKVVMLSSVTELHAYIDPGQLTTELGGT
QEYHHESWISHRTAIEAFALMVKTTAQTLQAFGTELAETELPNDAKATTNLLHTHTLKKD
TMKEDLQVALSQGGRLLDCINEPLQTDPEYSMTHDELENLETVQRLLGQLDETETAFDDF
WERHRTKLEQCLQLRHFEQHFREVRAQLDVTSERLSGFSEVSVSPAHGEHVLRELAGHED
KACDVLDRALSLACEGDRLIENSHYAEDSIRPKCSELREVCDEISATLRCKKNLLLRAME
MHHSLEKASQWCEEGIFLLANQPVDRCQSQDGAEAALQELERYLETLPLHTLADRSAICC
QYESVLTTQLKDQVERVFQKQGSVQEMFEKRRISLKKLAAKQTRPVQPVAPRPEVKSPHS
SPNQQRKERRYSADNAICKKVESPLLNGTRHASLSEEEENLAVLRRHVMNELLETERAYV
EELLCVLEGYAAEMDNPAMAPLIPSTLLNKKDVLFGNMFEIYQFHKRTFLKELEAYTDFP
ELVGRCFLERMTDLQIYEAYCQNKPRSESLWRQCSDCAFFQECQKKLAHKLGLDSYLLKP
VQRITKYQLLLKELLKYSKGCDGCDDLQKALSSILGILKAVNDSMHLIAITGYEGNLSEL
GRLLMQGSFSVWTEHKKGHAKVKDLARFKPMQRHLFLHEKALLFCKRREENGEGYEKAPS
YSFKHSLSMSAVGITENAKGDNKKFEVWCNSRDEVFIVQAPTPEIKTSWVNEICKVLTQQ
LKACRDARQPKNLDSVSMSPTSSSSSISLSPFRSSGQKNQKKQDEKKAEPSPTSDANSSS
SPKHKDEPVTSPTTDRSLVAKKRFTLQGFSNLKSPKGSALSPEHGTKRHLVKSDPTPFGF
KGWSKTSLSVDASEENDGYSSSEDPMNSDPEDDGGKKLAPGKYTVVADCEKAGPQELSVK
SGDMVQLIREGEDGQWFVRNLRSSKEGWVAAANLLSLITESKSSQSLSSSDGSVSGNIST
SSSCSETYTSFSDIKP
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgggagagattgagagagcgtttgggaacacaaatgaggaggagagcgggatgaggcgg
gtgagattcttctccttagtggaggatatgaagacggcgagggaggaagaggagagcagg
cggagggacgagaggaagggtggaaaacgaggatttggaggagagaggcttgtcagcatt
tcgctggaggagatggagagctactacagatacgccctgtgctgtcggcagctgtataat
gacatcatgcatggggaagatggtcctctgtgtgccgcagaaatcggatctgaactccag
aaacagtttgccatcctgccagggggccgcgggataaacggccgccctatcatggtcttc
ccagagttccccgagttcagcgagctggaggaggaggagctccaaagcgtcctccgctac
ctcaccagcgtccccagcgttgccgcatcgggagtgggtttcatcctggtcatcgacaga
cgactggaccgatgggccgccgtcagggctaccctgctccgcatcgctggctcatttcca
gggaacttgcacttggttctggtgttgcgtcccactactttgttgcagcggactctgtca
gacttcctgttcaagttcaacagggacgagttcaaaatgaaggtggtgatgctgagttcg
gtgactgaactccatgcttatatcgacccaggacaactcaccacagagctgggaggcacg
caggagtaccaccacgagagctggatctctcaccgcactgcaatcgaggcctttgccctc
atggtgaagaccacggctcagactctgcaggcgttcggcactgagctcgcggagacagaa
ttaccaaacgacgccaaggccaccaccaacctgctgcacacacacacactgaagaaggac
acaatgaaggaggacctgcaggtggcgctgtctcaaggtggacgcctgttggactgcatc
aacgagcctctacagacagaccccgaatacagcatgacccatgatgagctggagaatttg
gagactgtgcagagactcctgggtcagctggacgagaccgagacagcattcgacgatttc
tgggagcgccaccgcaccaagctggaacagtgtttgcagctgcgccattttgaacagcac
ttccgtgaagtgcgcgctcagcttgatgtgacctcagaaaggctgtcgggtttctccgag
gtcagcgtcagccccgcccacggcgagcacgtcctccgagagctcgccgggcacgaggac
aaggcctgtgacgtcctggaccgcgccctgtccctggcctgcgagggtgacaggctgata
gaaaactcgcactacgccgaggactccatcaggccgaagtgcagtgagctaagggaggtg
tgcgacgagatcagcgccaccctgaggtgcaagaagaacctgctgctcagggcgatggag
atgcaccactcattggagaaggcgtcacagtggtgtgaggagggcatcttcctattggcc
aaccagcccgttgaccgctgtcagtctcaggacggcgctgaagcggctctgcaagaactg
gagcggtacctggaaacgttgccgctgcacaccctcgccgaccgcagcgccatctgctgc
cagtatgaatcggtgctcaccactcagctcaaggaccaggtagagagagttttccagaag
cagggctctgtgcaggagatgttcgagaagagacgcatcagtttgaagaaactcgccgcc
aaacagacccgaccggtccagccagtggcaccgagacccgaagtcaagtcgccgcactcc
tcgcccaatcaacagagaaaagagaggagatactccgcagataatgccatctgcaaaaag
gtggagtctcctcttcttaatggcaccagacacgcttctctctcagaggaagaagaaaac
ctggcagtgcttcggcgtcacgtgatgaacgagctgctggagacggagagagcgtacgtg
gaggagctgctgtgtgtgctggagggctacgcagcagagatggacaaccccgccatggct
cccctcatccccagcacgctgctcaacaagaaggacgtcctgtttgggaacatgtttgaa
atctaccagttccacaagaggacatttctaaaggaactggaagcgtacactgactttcca
gagctggtgggccgctgctttttagaacggatgacggacctgcagatctacgaggcctac
tgccagaacaagcctcgctccgagagcttgtggagacagtgctccgactgtgccttcttc
caggagtgccagaagaagctggcacataaacttggtttggactcctacctccttaaacct
gtccagagaatcaccaagtaccagctactactgaaggagttgttgaagtacagtaaaggc
tgtgatggctgtgatgacctacagaaggcgctctcctctattctggggatcctgaaagct
gtgaatgattccatgcacctcatcgctatcacaggatacgagggtaacctctcggagctg
ggccgtctgctcatgcaaggctccttcagcgtgtggacggagcacaaaaaaggccacgcc
aaggtcaaggacctggcccgcttcaagcccatgcagcggcacctgttcctgcacgagaag
gccctgctcttctgcaagcggagggaggagaacggcgagggctacgagaaagcgccgtcc
tacagcttcaaacactcactcagcatgagtgccgtgggaataacggagaacgctaaagga
gataacaagaagtttgaagtttggtgcaactccagagacgaggtttttattgtgcaggct
ccaacgccagagattaaaacttcgtgggtgaacgagatctgcaaagttctgacccagcaa
ctcaaagcgtgcagagacgccagacaaccgaagaacttagactctgtttctatgagtccc
accagcagcagcagctccatctcactcagcccgttccgtagcagtggtcagaagaaccag
aagaagcaggatgagaagaaagccgagccgagcccgacctccgatgcaaactcctcttcc
tcacccaaacacaaagatgaaccggtgaccagtccgaccactgacaggtccttggtggct
aaaaagcgttttactttacagggcttcagcaatctcaagagtccaaaaggctcggccctg
agccccgaacacggcaccaaacgccacctggtcaagagcgaccccacgccgtttgggttc
aaaggctggagcaagacgtctctctcggtggacgcctcggaggagaacgacggctactcc
agcagcgaggaccccatgaactcggaccccgaggatgacggaggaaagaagctggcccca
ggaaagtacacggtggtagcagattgcgagaaggcgggacctcaggagctgtctgtcaag
agtggagacatggtgcagctaatcagagagggagaggatggacagtggtttgtgaggaac
cttcgcagcagcaaggagggctgggtggcggcggcaaacctcctcagcctcatcacagag
tccaagtcgtcgcagtcgctcagcagctcagacggcagcgtctccggcaacatcagcact
tcttccagctgcagcgagacctacaccagcttctccgacatcaaaccctga
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