Hippoglossus stenolepis (Pacific halibut): 118103427
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Entry
118103427 CDS
T08308
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118103427 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118103427 (smarcd1)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118103427 (smarcd1)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118103427 (smarcd1)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118103427 (smarcd1)
PBAF complex
118103427 (smarcd1)
GBAF(ncBAF) complex
118103427 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
118103427
NCBI-ProteinID:
XP_035006252
LinkDB
All DBs
Position
3:complement(8777769..8793101)
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AA seq
528 aa
AA seq
DB search
MAARGGFQTAPTGGGGGAMGPGPPVPGAGPGMGPGTPSGRMGPSSAAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPVYGNSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQQNRN
QHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPR
LARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQATVGFPTQAWKERIF
ETQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSF
LLSTASQQEIAGLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMT
DVVGNPEEERRAEFYYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggcggcttccagacggcacctacgggtggtggcggcggagcgatggga
cctggaccaccggtaccgggcgcgggaccaggcatggggcccgggactccctcgggaagg
atgggcccgtcttcggccgcgcagaaccacatgtaccgctccccgatgcccgggcctgga
tacccgagaccgggcatgcctccctccagccgtatgacccctcagggaccagccatgggc
cccccagtatacggcaacagccctgtttctcgccctgggatgcctggtgtcatggatccg
tctcgtaagaggccagccccccagcagattcagcaggttcagcagcagcagaaccgcaac
cagcacacaaagaagaagaagatggctgataaaattctacctcagaggatcagggaactg
gtcccagagtctcaggcttatatggatctgctggcttttgagaggaagctggaccagacc
atcatgcgcaaaaggctggacatccaagaggccctcaagaggcccatcaagcaaaagagg
aagcttcggatcttcatatcgaacaccttcaaccctgcgaagccggatgctgaggacgga
gaaggcacagttgcatcgtgggagctgcgtgttgaagggcgtctgctggaagatacagcc
gtgtccaagtatgaagccaccaaacagaaaaggaagttttcttctttcttcaagtccctg
gtgattgagttggacaaggacctttatggaccagataatcaccttgtggaatggcacagg
accgccaccacccaggagactgatggtttccaggtgaagaggccaggtgatgtgggtgtt
cgctgcaccgtcctcctcatgctggactaccagccccctcaattcaagctggacccccgg
ctggctcgtatgctgggtatccacacccagaccagacctgttatcattcaggccctttgg
cagtacgtcaagacccacaaactccaggaccctcatgagcgcgagttcatcaactgtgac
aagtacctgcagcaggccactgtgggtttccccacacaagcctggaaggagaggattttt
gagacccagagaatgaagttctccgagatcccgcagcgcttgcatgcactgctgatgcct
ccagagcccatcatcatcaaccatgtgatcagtgtggaccctaatgaccaaaagaagact
gcttgctatgacattgatgtggaagtggacgacacactgaagacccagatgaactccttc
ctgctctccactgccagtcagcaggaaatcgcaggactggacaacaagatccatgaaacc
attgagaccatcaaccagctgaagacccagagagagttcatgctgagttttgccagagat
cctcagggctttatcaacgattggctgcagtcccagtgcagagacctcaagaccatgact
gatgtggtaggaaacccagaagaagagcgtcgggctgagttttactaccagccgtgggct
caggaggccgtctgtcgctacttctactccaaggtccagcagagacgacaggagctggag
caggcgctcggcatcaggaacacctaa
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