Hippoglossus stenolepis (Pacific halibut): 118103459
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Entry
118103459 CDS
T08308
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118103459 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118103459 (runx1)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
118103459 (runx1)
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
118103459
NCBI-ProteinID:
XP_035006326
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Position
24:complement(9412752..9463561)
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AA seq
481 aa
AA seq
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MVFLWDAKYDPAPGRRYTPPSTTLASGGKMAEALPLGAQEAGGGAALMGKLRMADRGMVE
VISDHPGELVKTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDIPDGTLVTVMAGNDENY
SAELRNATAAIKNQVARFNDLRFVGRSGRGKSFNLTITVFTNPPQVATYQRAIKITVDGP
REPRRHRQKMDEVKPGTLAFSERLTELEQLRRSSMRVTPPHHHHHQPSTNPRQALNSATF
SSPTHTQLTADSRQMQSSPSWSYDQSYPYLGQITAPTVHTANPLSPGRSSLSDLSSRLTG
PDLTAFGDPRMTLERSFSSLPSLPDSRFSDPRVHYPPTAAAFTYAPSHNSVSNSALGISM
ATAMATTPAGRYHTYLPPPYPANTPHQAQNGHFQSTSSPYHLYYSTAAGSYQFSMMAGGG
GSSDSRSPPRILPPCTNASTGSSLLHPSLPNQNEGVGVEVESSHSSSPTNMAAAEAVWRP
Y
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttctgtgggacgcaaaatacgacccagcccctggccggcgttacactcccccc
tccaccaccctcgcctccggggggaagatggccgaggccctgcccctgggggcccaggag
gccggaggcggggccgctctgatgggcaaactgcgtatggcagaccgcggcatggtggag
gtgatctcagatcatccaggagagctggtgaagacggacagtccgaacttcctctgctcg
gtgctgccgacacactggaggtgtaacaagactctgcccattgccttcaaggtggttgcc
ctgggcgacatccccgatggcaccttggtaacggtgatggcaggaaacgacgagaattac
tcagcggagcttcgcaacgccacggcagccatcaagaaccaagtggctcgattcaacgac
ctacgttttgtcggccgcagtggaagagggaagagtttcaacctgaccatcacagtgttc
accaaccctcctcaagtggccacataccaaagagctattaaaattacagtggacggtccg
agagagccacgacgtcatcgtcagaagatggacgaggtcaaaccaggcacactggcgttc
tctgagaggctaactgagctggagcagctgaggcggagctcgatgagggtgacgccgcct
caccatcatcaccatcaaccctccaccaacccccgccaagcactcaactctgccacattc
tccagtcccacgcacacgcagttaactgctgattccagacagatgcagtcgtctccatct
tggtcctacgaccagtcttatccctaccttggccaaataaccgcacccactgtccataca
gccaaccccctttcgcctggccgctcttcactcagcgacttgtcctctcgactcacaggc
ccggacctcacagccttcggagaccccaggatgaccttggaacgatctttctcttctctt
ccctccttgcctgactcccgcttctccgacccccgcgtgcactaccctcccacagcggct
gccttcacctacgccccctcccacaactctgtctccaacagcgcccttggcatcagcatg
gcgacagccatggcgaccaccccagcagggaggtaccacacctacctgcctcctccctat
cctgcgaacacgccgcaccaggctcagaatgggcatttccagtccacctcctcaccgtac
cacctgtactactccaccgctgctggatcgtaccagttctccatgatggccggaggagga
ggcagcagcgactcacgctcccctccaaggatcctgccaccatgcaccaacgcctccaca
ggctcctccctcctgcacccgtcattgcccaatcagaatgaaggcgtgggcgttgaggtg
gagtctagccatagtagctccccgacaaacatggcggctgctgaagctgtctggagaccg
tactga
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