Hippoglossus stenolepis (Pacific halibut): 118103502
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Entry
118103502 CDS
T08308
Symbol
agap1
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118103502 (agap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118103502 (agap1)
Membrane trafficking [BR:
hsp04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
118103502 (agap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
Ras
PH
Ank_2
Ank
Ank_5
Ank_4
PH_6
Roc
Motif
Other DBs
NCBI-GeneID:
118103502
NCBI-ProteinID:
XP_035006418
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All DBs
Position
24:complement(515718..600795)
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AA seq
1040 aa
AA seq
DB search
MSHSKSNGKPAKVTSPETPPPKRPPGLLRRSFSFRHWTGGELLRLRALSKDKHHSSSGCI
ERDTGPDGGEVTPEAAAVPPPSRHNDLTREKSRTLEVGAVLNKTDSMTELSRWERARGSK
NRTLDNSDLQRLAAEKDASGGGFLRGGGGRSSERRLVRFFSGIFSRRDGASTSTPVGSPS
TNRSLRRSRRAGLSQSSTESMNGGSTDDAFVNSQEWTLSRAVPELKVGIVGNLASGKSAL
VHRYLTGTYVQEESPEGGRFKKEIVVDGQSHLLLIRDEGGPPEPQFALWVDAVIFVFSLE
DEISFQTVYHYFSRLASYRNTSDLPLVLVGTQDAISSANPRVIDDGRARKLSNDLKRCTY
YETCATYGLNVERVFQDVAQKISATRKKQQLSIGPCKSLPNSPSHSSVCATQVSAVHITQ
TSNGGGSLSDYSSSVPSTPSTSQKELRIDVPQTTNTPTPVRKQSKRRSNLFTSRKANEPD
KDKKGLEARADSIGSGRAIPIKQGMLLKRSGKTLNKEWKKKYVTLCDNGLLTYHPSLHDY
MQNVHGKEIDLLRTTVKVPGKRPPRAVSTCAAVPSPKTNGLTKDMSSLQLGQTPGTVTTS
TSVSQMASGPSLVSFNSRGMEGMHQRSYSVSSADQWAEATVIANSGVSTDTGLGDSVCSS
PSISSTTSPKMEPPPSPHANRKKHRRKKSTSNFKADGLSGTAEAKRKAWKLNRVASLRSI
YANSLHNSEEQEENFEFTIVSLTGQTWHFEATSYEERDSWVQVIESQILASLQSCESSKN
KSRLTSQTEAMALQSIRSIRGNGHCADCEAQSPDWASLNLGALICIECSGIHRNLGTHLS
RVRSLDLDEWPLELIKVMSAIGNELANSVWQANAQGRLKPGPDASREERERWIRAKYEQR
LFLASLPGTDLSLGQQLLRATAEEDLRAVVLLLAHGSRQQVNETCGEGDGRSALHLSSRK
GNVVVTQLLIWYGVDLMARDAHGNSAMAYARQANSQECVDTLAQYGCPDERFPLMATPNL
SRRNTNRNNSCSSSGSTALI
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactccaagagcaacgggaaaccagctaaagttacgtctcctgagaccccccct
ccgaagagaccccccggtctcctgcggcgcagcttcagcttcaggcactggacgggcggc
gagctgctgcgactgcgggcgctgtccaaagacaaacaccacagcagctccggctgcata
gaacgtgacaccgggcctgatggcggcgaggtgaccccagaggctgccgctgtgccgcca
ccttctcgccataacgacctcaccagagagaagagcaggaccctggaggtcggagccgtc
ctgaacaagacggactccatgaccgagctgagccgctgggagagagctcgcggcagcaag
aaccggacgctggacaacagcgacctgcagcgcctggcggccgagaaggacgcatcaggt
ggggggttcctgcggggaggaggcggtcgctccagtgagaggcgcctggttcgcttcttc
agcgggatcttctccaggagggacggggcgtccacttccacgccggtgggcagccccagc
accaaccggtccctgcggcgcagcaggagggcggggctgtcccagtccagtacggagagc
atgaacggaggaagcactgacgatgcgtttgtgaacagtcaggagtggacgctgagtcga
gccgttcctgagctgaaagtgggcattgtgggtaacctggccagtggtaagtctgccctg
gtgcacaggtacctgacggggacgtacgtccaggaggagtcgcctgaaggaggtcgtttc
aagaaggagatcgtggtcgacggtcagagtcacctgctgctgatccgagacgaaggaggc
cccccggagcctcagtttgcgttgtgggtcgatgccgtgatcttcgtcttcagcctggag
gacgagatcagcttccagacggtttatcactacttcagccgcctcgccagctacaggaac
accagcgacctgccgctggtgctggtcggcacgcaagacgccatcagctcggcgaacccc
cgagtgatcgacgacggccgcgcccggaagctctccaacgacctgaagcgctgcacctac
tacgagacctgcgccacctacgggctgaacgtggagcgggtcttccaggacgtggctcag
aagatctcggccaccaggaagaagcagcagttgtccatcgggccgtgcaagtcgctgccc
aactccccgagtcactcgtccgtctgcgccacgcaggtgtcggccgtccacatcacccag
acgagtaacggcggcggcagcctgagcgactactcgtcgtcggtgccgtcgacgcccagc
acgagtcagaaggagctgcgcatcgacgtgccgcagaccaccaacacgcccacgcccgtc
aggaagcagtccaaacgccgctccaacctcttcacctcgaggaaggccaacgagccggac
aaggacaagaaaggcctggaggctcgagcggacagcatcggcagcgggcgagccatcccc
atcaaacagggaatgttgctgaagagaagcggaaaaaccctcaacaaggagtggaagaag
aagtacgtgacgctgtgtgacaacggactgctcacctaccaccccagcctgcacgactac
atgcagaacgtccacgggaaggagatcgacctgctgaggaccacggtgaaggtcccgggg
aagaggccgccacgcgccgtctccacctgcgccgccgtgcccagccccaagaccaacggg
ctgaccaaggacatgagcagcctgcagctgggacagactccaggcacggtgaccaccagc
acgtccgtgtcccagatggcgagcggccccagtctggtgtccttcaacagccgcggcatg
gaggggatgcaccagcgctcgtactccgtctccagcgccgaccagtgggccgaggccacg
gtcatcgccaactccggagtcagcacggacacgggcctcggcgactcggtctgctccagt
cccagcatctccagcaccaccagccccaagatggagccgccgccgtcgccacacgccaac
cgcaagaagcaccggcggaagaagagcaccagcaacttcaaagccgacggcctctctggt
actgcggaagccaagcgcaaagcgtggaaactaaatcgtgtcgctagtctgcgaagcatt
tacgccaacagtctgcacaactccgaagaacaagaggagaactttgagttcaccatcgtg
tcgctgacggggcagacgtggcactttgaggccacgtcgtacgaggagcgagactcctgg
gtccaggtgatcgagagtcagatcctggccagtctgcagtcgtgtgagagcagcaagaac
aagtctcgtctgaccagccagacggaggcgatggctcttcagtccatcagaagcatccga
ggaaacggtcactgtgccgactgtgaagctcagagccccgactgggcgagtctgaacctc
ggcgccctgatctgcatcgagtgctcgggcatccacaggaacctgggcacccacctgtcc
cgggtgcgctctctggacctggacgagtggccgctggagctcatcaaggtcatgtcggcc
atcggcaacgagctcgccaacagcgtgtggcaggccaacgctcaggggcgcctcaagccc
gggccggacgccagcagggaggagcgagagcgctggatccgggcgaagtacgagcagcgt
ctgttcctggcgtcgctgccgggcaccgacctgtctctgggccagcagctgctgagggcg
acggccgaggaggacctgcgcgccgtcgtgctgctgctcgcccacgggtcccgacagcag
gtcaacgagacgtgtggcgagggagacggacgcagcgccctgcacctgtccagccgcaag
ggcaacgtggtcgtcacgcagctgctcatctggtacggcgtggacctgatggcgagggac
gcccacggtaacagtgcgatggcgtacgctcggcaggccaacagtcaggagtgcgtggac
acgctggctcagtacggctgtcctgacgagcgcttcccgctcatggccacgcccaacctg
tcccgccgcaacaccaaccgcaacaacagctgcagcagcagcggcagcaccgccctcata
tga
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